G169042 (stip1)


Basic Information

Item Value
gene id G169042
gene name stip1
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 26962206 ~ 26965040 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229197
CTCAAGTTGGATGCACAATTCACAATcCTTCACGGCAAGTGGAAACTCCAACAGCTTTGTGTAGCAGGCCGCTCTGTTACTGAAGAGTTTGGCATCCTTGGGGTTTCTCTTAATGGCCTCGGAGTAGTGTTTCATGGCTAAGGGGTAGTCTCCTTTCTGGAAGGCGTCGTTGCCCTTGTTCTTCTCTTCCAGGGCTAAGTCAGGGTTGATGTAGGCTAGTTTCTCCTGCTCCTTCAATATCTTCTCTGCCTGTTGACACTTCTTCAAGACGTCGGGAGTACGATGCTCCGTCAAACTCTTGTTGAAATACTGAACTGCTTCTTTGTATTTTTCCTGCTTGAAGTAGGAGTTTCCAATCCTAGCCAAGGCCTTGCTATTTGTCTGTAGTCTTCCCGGTTTTCTCGGCCAACATCAATGGCCTTCTCACACAGCTCTCGGCACTTCTCCATATTTCCCTTTTCAAAGTACACAGCTGCTTGATTAGATATATAGGTCATGTTGGTGGGGTCATGTTTGATTGCTTCTTCATAATGTTTCAGCGCCACATCAAAGTCCTTATTCTTATATGCAGTATTCCCAAGTTCTTTTTCCTTCAAGgcGTTTCTCTTGTTTTCGGGAAGGTCTTCCTCTTTGGGAGGAGGTGGCTGAGTCTCTTTGGGtttggggggaggagggggagtagggttctcctcttcttccatcTCAGAGAGGTTCAGTCCCAGCAGCACAGAGAGAGTGGTCATCACTCTGGGATCCTGCAGTTTCCTGCAAAACAGTTaggcaaacaaacaaatgcattTCTAATACCACAGTATTCAGGGCTAATGCACATTTTCCAAATTAATTTGAGATTTTTGATTCTGATCCATCCCTTCTCAATATTATACATGCTAATGGTTACTGAGGCACAACACAGAGGAGGATCCTTTACAATATCAAAAGAATATGGA
>TU229198
CACCACAAGGTTTACAGCGGCAGACTGTTGTatgtcccggtgttggaattctctacagtgaaatacagacacttttacaccatttagcGGTCAGctttttaaccgtgtttaacccagctactagctaacggtaagcTAACATCGTTACCagctgccaagtgtaacgttagtgttaactagcgtgagatgcagcgatgcttctgctGCCTCCAATGttggtttcggagcatcagagggcagcgcagacatttaagtggcaccgaaatccatACAAAACATGGATCAACTGTGGCGCAACTAATTCTGAGCGATTGGAGCACCTTGGCAGACGAATGTTTACCATTCCAGCTgtgggacctttgttgcatgtcataccTGTACAGTACTTTGTtcaactttggttgttttaaatgtgctatataaataaacttgactatACCTCCCTCCCCCCAATGATGCAACAACATGTTTTGTTGGCAATCACGAGTTTCCTCAAATCTGAGGATTTAGTTGTGGTGCTTAGCCCAGTGGCAGAAACTCCAAATAATCACAAAGTCTGATTGTGGAGGAGAATTGATTGTGGTGGACAACTCAGAATAATTCTATATATGAACTTTATGGGTCAAACGGTGCAAATGTGTGAGGCTGTCATCGCTTTTCCAACATGTGAGACTATGTACCTGCTTGATTAGATATATAGGTCATGTTGGTGGGGTCATGTTTGATTGCTTCTTCATAATGTTTCAGCGCCACATCAAAGTCCTTATTCTTATATGCAGTATTCCCAAGTTCTTTTTCCTTCAAGgcGTTTCTCTTGTTTTCGGGAAGGTCTTCCTCTTTGGGAGGAGGTGGCTGAGTCTCTTTGGGtttggggggaggagggggagtagggttctcctcttcttccatcTCAGAGAGGTTCAGTCCCAGCAGCACAGAGAGAGTGGTCATCACTCTGGGATCCTGCAGTTTCCTGCAAAACAGTTaggcaaacaaacaaatgcattTCTAATACCACAGTATTCAGGGCTAATGCACATTTTCCAAATTAATTTGAGATTTTTGATTCTGATCCATCCCTTCTCAATATTATACATGCTAATGGTTACTGAGGCACAACACAGAGGAGGATCCTTTACAATATCAAAAGAATATGGA

Function

symbol description
stip1 Predicted to enable Hsp90 protein binding activity. Orthologous to human STIP1 (stress induced phosphoprotein 1).

NR:

description
PREDICTED: stress-induced-phosphoprotein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229197 False 950 TUCP 0.45 7 26962206 26965040
TU229198 True 1158 TUCP 0.43 2 26963741 26965040

Neighbor

gene id symbol gene type direction distance location
cnih2 cnih2,LOC100706298,LOC107091387,LOC108276897 coding upstream 178882 26771198 ~ 26783324 (+)
prdx5 NA coding upstream 281054 26677283 ~ 26681152 (+)
LOC120544052 kcnk4,LOC101470327,LOC104926336 coding upstream 308263 26640316 ~ 26653943 (+)
adssl LOC103133900,LOC102196784,LOC102782943,LOC103363363,LOC107082552,LOC100708095 coding upstream 324032 26626662 ~ 26638174 (+)
kif4 kif4a,LOC102783241 coding upstream 347183 26595941 ~ 26615023 (+)
LOC120544222 NA coding downstream 6280 26971320 ~ 26975490 (+)
LOC120543589 NA coding downstream 145665 27110705 ~ 27116039 (+)
aspa aspa coding downstream 152171 27117211 ~ 27131295 (+)
abr abr,LOC103375456 coding downstream 170977 27136017 ~ 27288433 (+)
trnav-aac_10 NA coding downstream 314609 27279649 ~ 27279721 (+)
G169027 NA non-coding upstream 1567 26957695 ~ 26960639 (+)
G169018 NA non-coding upstream 122649 26838992 ~ 26839557 (+)
G169011 LOC108233807,LOC100703904,LOC106511527,LOC101466262 non-coding upstream 132522 26827103 ~ 26829684 (+)
G169010 LOC106511527,LOC107091377,LOC100703904,LOC107386668,LOC101466262,LOC108233807 non-coding upstream 135156 26824603 ~ 26827050 (+)
G168973 LOC103363373,LOC104958000,LOC104926337,LOC100697704,LOC102781095 non-coding upstream 253480 26707143 ~ 26708726 (+)
G169060 NA non-coding downstream 73814 27038854 ~ 27081661 (+)
G169095 ubb,ubc,LOC107553588 non-coding downstream 326905 27291945 ~ 27297777 (+)
G169157 NA non-coding downstream 460113 27425153 ~ 27426322 (+)
LOC120543667 NA non-coding downstream 511245 27476285 ~ 27477131 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding downstream 735078 27700118 ~ 27701522 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 274943 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 286411 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 393706 26543796 ~ 26568500 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other upstream 738761 26000063 ~ 26223445 (+)
LOC120543603 LOC103357742,LOC104968170 other upstream 1069675 25868154 ~ 25892531 (+)
shpk shpk,LOC102781293 other downstream 554991 27520031 ~ 27531315 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 1831472 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 1916694 28881734 ~ 28942332 (+)
G169789 map6 other downstream 2980834 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 3046293 30011333 ~ 30113690 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location