G169218


Basic Information

Item Value
gene id G169218
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27526792 ~ 27527561 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229480
CTGATGACCCCCCTAGGGGTccaggaccccctgttgaagatctctgtgaagtgattacaattcatcctgaggggaacatgaatgtgtgtacaaCCAGGGCCTGAACTTTTTTGGCCACCAGCCACTGTGGCAAATGGGTTTTAAAATCCACTGTCCCCACAGGCTTTTTACCAGCCAACTTTGGCATGCGTTTGTTATCGTGTGTAGGTGGTTTTTTGATGACTTGTGGTCCTTAAATCGCTTCTCATTTTAAGTTTTTAGTCCTGATTACAAAAGGATTTAACTTTGCTTTCTCTGAGCCATACACACAACAGTCACTGCAGTACATTTGTTCTGTCGTAAATCAGCCACTCACGAACCTTACCATTGTCGCAAACTGTCCACtagggcgatagggagaaaatcagctatcacgatattcttgaccaaatacctcgatatagatattgcggcgatattctagggttgacaactggtgctttaacaaaatatcttcacacttagattttagatttccccacattactgatgattatcatcagtaatgtggacatcatgtctaagtggggaaaaggcaaataatagaacagctagaacagtctggtaagttcagaaaagtacatcactttactgtaatgcagcctttaaaaccaggaaaagacaaaacttatgtcatatcacgatattatgatatccaaaatctaagacaatatctagtctcatatcacgatatcgatataatatcgatatattgcccagccctactgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229480 True 770 lncRNA 0.41 1 27526792 27527561

Neighbor

gene id symbol gene type direction distance location
specc1 specc1 coding downstream 29790 27406845 ~ 27497002 (-)
adora2b adora2b coding downstream 121100 27389625 ~ 27405692 (-)
pigl pigl coding downstream 211234 27301352 ~ 27315558 (-)
ubb LOC107567755,LOC107588961 coding downstream 228936 27291939 ~ 27297856 (-)
c16h11orf54 clg10h11orf54,LOC104942043,LOC102212770,LOC102776035,LOC101486898 coding downstream 417618 27105279 ~ 27109174 (-)
fam222ba fam222b,LOC102781587 coding upstream 21354 27548915 ~ 27580839 (-)
LOC120543974 flot2,LOC103376511 coding upstream 77820 27605381 ~ 27625966 (-)
dhrs11a dhrs11 coding upstream 110394 27637955 ~ 27658237 (-)
ggnbp2 ggnbp2,LOC102784373 coding upstream 131635 27659196 ~ 27666736 (-)
znhit3 NA coding upstream 165921 27693482 ~ 27698749 (-)
G169217 shpk,LOC102781293 non-coding downstream 639 27524949 ~ 27526153 (-)
G169216 NA non-coding downstream 2174 27523463 ~ 27524618 (-)
G169173 NA non-coding downstream 100475 27425153 ~ 27426317 (-)
G169149 NA non-coding downstream 157882 27368209 ~ 27368910 (-)
G169118 NA non-coding downstream 237811 27248815 ~ 27288981 (-)
G169226 NA non-coding upstream 20307 27547868 ~ 27584924 (-)
LOC120543973 NA non-coding upstream 68259 27595820 ~ 27596564 (-)
G169236 NA non-coding upstream 74830 27602391 ~ 27603914 (-)
G169241 NA non-coding upstream 108035 27635596 ~ 27636019 (-)
G169255 NA non-coding upstream 186378 27713939 ~ 27716932 (-)
emc6 emc6 other downstream 7791 27515890 ~ 27519001 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other downstream 585585 26870550 ~ 26941207 (-)
gng3 gng3,LOC107559409 other downstream 833751 26688879 ~ 26693041 (-)
G168964 NA other downstream 841836 26681514 ~ 26684956 (-)
ammecr1 ammecr1 other downstream 914075 26574929 ~ 26612717 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other upstream 141120 27668681 ~ 27701551 (-)
gusb gusb other upstream 191438 27718999 ~ 27746458 (-)
LOC120544024 rnf43 other upstream 402978 27930539 ~ 28027777 (-)
LOC120544668 tspoap1 other upstream 520046 28047607 ~ 28122618 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other upstream 689682 28217243 ~ 28313133 (-)

Expression


Co-expression Network