pigl (pigl)


Basic Information

Item Value
gene id pigl
gene name pigl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27301352 ~ 27315558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776733.1
ACATTTGTCTTTACACGGATTGTTTACGGTAACGGTCAAAATAATGAGTGTTTACCTGGTTGTCTCCATAGTTTTATGCTATATGGTTTGGATAAAATGCATTTACTATCGACATCGTCGAACTTTGGTGAAGTCATTGAAACATCTAATGAACGGTTCAACAAGCAAAGAACCAAACGGCGCTGATATCAGAGCTCTTATTGTAACTGCGCATCCGGATGATGAATGCATGTTCTTCGCTCCAACGATTATACGACTCGTTGAATTGAATGCCAGCGTTCATTTGCTGTGTTTATCTGAAGGAAACTACTACAATCAAGGAGCTCAGCGTAAACAAGAACTTCTCAACAGTTGTGCCGTGTTGGGGATACCAGACTCCAGAATCACCATAGTAGACCATAAGAGACTTCCAGACGATCCCAAAGCAGACTGGAGCGTCTCGCTGGTCTCTTCTATGATTGTGAAGCACATGAGAGCTCAGTCCTTCAACATGGTGCTGACCTTCGATGGAAGCGGAGTGAGCGGCCATGCCAATCACATAGCCATCCATAAAGCTGTCAGCCATCTCGCTTCCAGTGGACAAGTACCCAATGACTGCTGTTTGCTCTCCCTGGTGACTGTTGGCCTCCTCAGGAAGTACATCTCCTTCCTGGAGCTTCCCTTCAGCTGGCTGCTGCCCTCATGCCTCCGCTGTATTATAGGCTCACAGGGATACAGACAAGCCAAAGACGCCATGTTTTGTCACCGCACTCAACTGCTGTGGTTTCGTTACCTCTACATCACCTTGTCTCGGTACATGTTCGTCAACACATTCCAAATGATCCCCAGAGGGCCAAAGAACCTGAAGATCTATTAGGTTTATCTTCATCCAGATGCACTGATTATTGTTACTCTGTTAGGTGTCCCACTGCCTAACTGCTCGATTACTGTAGTAAAAGAAATCTTTACAAATCTAATGAGCTGTTTTGCTCACAGTGAATAAAGATTTCTTCAGTACTTTATTGGCTAAAGTAGCCTGAATATTTTATGGAAGCATTTTCCGTTAATAAAGTTGACAAAAAGAATTGTAACGACAACTTCTTTTTCCCAAATAAACATCTTTATTGTCATACTGTATAAAACAACACTAGGTTTTGAatcagttgttttttgtttttttttatcttacaaTGTCAAAGATACTGTACACTATGCCTGTTATACTGCTGATTAAAAAAACTCTTGATTCTTA
>XM_039776734.1
ttccTCTGTGCTCCCACCTGTGTCACAGCTGTTTAGCAGGACATTAAATCCCTGAACCATTTTATTATGTAAAGCAACTGATCAAGCAGGATAATATTACTATGCTAACCATCAGAATCAGCTGTTGCAGTTCTGGAAACTACTACAATCAAGGAGCTCAGCGTAAACAAGAACTTCTCAACAGTTGTGCCGTGTTGGGGATACCAGACTCCAGAATCACCATAGTAGACCATAAGAGACTTCCAGACGATCCCAAAGCAGACTGGAGCGTCTCGCTGGTCTCTTCTATGATTGTGAAGCACATGAGAGCTCAGTCCTTCAACATGGTGCTGACCTTCGATGGAAGCGGAGTGAGCGGCCATGCCAATCACATAGCCATCCATAAAGCTGTCAGCCATCTCGCTTCCAGTGGACAAGTACCCAATGACTGCTGTTTGCTCTCCCTGGTGACTGTTGGCCTCCTCAGGAAGTACATCTCCTTCCTGGAGCTTCCCTTCAGCTGGCTGCTGCCCTCATGCCTCCGCTGTATTATAGGCTCACAGGGATACAGACAAGCCAAAGACGCCATGTTTTGTCACCGCACTCAACTGCTGTGGTTTCGTTACCTCTACATCACCTTGTCTCGGTACATGTTCGTCAACACATTCCAAATGATCCCCAGAGGGCCAAAGAACCTGAAGATCTATTAGGTTTATCTTCATCCAGATGCACTGATTATTGTTACTCTGTTAGGTGTCCCACTGCCTAACTGCTCGATTACTGTAGTAAAAGAAATCTTTACAAATCTAATGAGCTGTTTTGCTCACAGTGAATAAAGATTTCTTCAGTACTTTATTGGCTAAAGTAGCCTGAATATTTTATGGAAGCATTTTCCGTTAATAAAGTTGACAAAAAGAATTGTAACGACAACTTCTTTTTCCCAAATAAACATCTTTATTGTCATACTGTATAAAACAACACTAGGTTTTGAatcagttgttttttgtttttttttatcttacaaTGTCAAAGATACTGTACACTATGCCTGTTATACTGCTGATTAAAAAAACTCTTGATTCTTA

Function

symbol description
pigl Predicted to enable N-acetylglucosaminylphosphatidylinositol deacetylase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in CHIME syndrome. Orthologous to human PIGL (phosphatidylinositol glycan anchor biosynthesis class L).

NR:

description
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

GO: NA

KEGG:

id description
K03434 PIGL; N-acetylglucosaminylphosphatidylinositol deacetylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776733.1 True 1231 mRNA 0.42 7 27301352 27313972
XM_039776734.1 False 1064 mRNA 0.42 7 27301352 27315558

Neighbor

gene id symbol gene type direction distance location
ubb LOC107567755,LOC107588961 coding downstream 3496 27291939 ~ 27297856 (-)
c16h11orf54 clg10h11orf54,LOC104942043,LOC102212770,LOC102776035,LOC101486898 coding downstream 192178 27105279 ~ 27109174 (-)
akap10 NA coding downstream 197637 27084874 ~ 27103715 (-)
LOC120543912 LOC101488131,LOC102213336,LOC105418249,LOC102076382 coding downstream 219773 26975662 ~ 27081579 (-)
stip1 stip1 coding downstream 333354 26959537 ~ 26967998 (-)
adora2b adora2b coding upstream 74067 27389625 ~ 27405692 (-)
specc1 specc1 coding upstream 91287 27406845 ~ 27497002 (-)
fam222ba fam222b,LOC102781587 coding upstream 233357 27548915 ~ 27580839 (-)
LOC120543974 flot2,LOC103376511 coding upstream 289823 27605381 ~ 27625966 (-)
dhrs11a dhrs11 coding upstream 322397 27637955 ~ 27658237 (-)
G169118 NA non-coding downstream 12371 27248815 ~ 27288981 (-)
G169119 abr non-coding downstream 16850 27273563 ~ 27284502 (-)
LOC120543914 NA non-coding downstream 244784 27053046 ~ 27056568 (-)
G168966 NA non-coding downstream 612527 26687379 ~ 26688825 (-)
G168963 NA non-coding downstream 620210 26677263 ~ 26681142 (-)
G169149 NA non-coding upstream 52651 27368209 ~ 27368910 (-)
G169173 NA non-coding upstream 109595 27425153 ~ 27426317 (-)
G169216 NA non-coding upstream 207905 27523463 ~ 27524618 (-)
G169217 shpk,LOC102781293 non-coding upstream 209391 27524949 ~ 27526153 (-)
G169218 NA non-coding upstream 211234 27526792 ~ 27527561 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other downstream 360145 26870550 ~ 26941207 (-)
gng3 gng3,LOC107559409 other downstream 608311 26688879 ~ 26693041 (-)
G168964 NA other downstream 616396 26681514 ~ 26684956 (-)
ammecr1 ammecr1 other downstream 688635 26574929 ~ 26612717 (-)
vamp2 vamp2,mpp1,LOC103367795,LOC104941032,LOC107742350,LOC107720682,LOC107082578,LOC107386619 other downstream 1065158 26224819 ~ 26236194 (-)
emc6 emc6 other upstream 200332 27515890 ~ 27519001 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other upstream 353123 27668681 ~ 27701551 (-)
gusb gusb other upstream 403441 27718999 ~ 27746458 (-)
LOC120544024 rnf43 other upstream 614981 27930539 ~ 28027777 (-)
LOC120544668 tspoap1 other upstream 732049 28047607 ~ 28122618 (-)

Expression


Co-expression Network