G168966


Basic Information

Item Value
gene id G168966
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 26687379 ~ 26688825 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229106
GTCTCAGTGTTAGAGGGGATGAACAAACATAGCTTGAAAACAAAACCCAAACCTTCTATCAATAaagaatcatcatcatcaaaagaAAAGAATGGACGTCTTGAGAAATGTAAGAAACGGCTATCATCTAGTTGAAGACACGTTTCATGCTCATACATATTACAGGTAACTGCCAAAAAAGGGAACAGTCTGTACATCAAGTGTCTTAACAAGCAACCGTCAACGAGACAGACTCATATTAAGGATTCTGCAGCATTTGACACTTAACTGGGAGGCTAAATTCCCACATTAGGTCTTTGGATTATGGTGGTGCTACATGTCTCAGATGCTACTCTTGATAGGTCAGGGCTGTCGGTTTTCCCCATAGAAATTGTCCATACATTTGAGACCTGATAACTGAGGAAGAAGACAAGCCTATGTTAGGTAATTAAGTATGACATCTCCCATGTGGCGATTACGCGTAGATGGAGGTAAAAAACCTTCTTCAGATTACACATGCTTTACTTACAGGTCGAAGTCTTCATTCAGTGTTCTTTCTCCCATTAACGTTTAGATTGGCCTTTAGAGCTACATCCCATCTATTGTCGATATATTTTGTAATCCTCATTCACTATCCTCTGTTTTGGCAGTTACTTGTATCTAGCAAGGACAGCAGCGGTTAATGAGTGGATTATCACCATGTAATCAATTCATTTCAAGGTTGCATTACGATTTTTGCTCATTTCTATACTGTTGCTGTGGTGTggatgtgcaagtgtgtgtatgcattAGGTGCTACTGTGAAACTAAAGCAACAATTCTGAGCATCTGATCACTCAAATCCAGATTTTATAGCTCAATAGCACacaggacccccccccccaccaaaaaaaaaaacattccaggGGTTATGGACTTTTAATTATATAATCTAagccattaaaagaaaaataatctaCTATGTTATTATGAACCTGCCACCTGACCAATTTTATATTTCTTTGaggtgaaaaaataaaaaaaatacagcagtTATAATGCGATGTACACCATCATTTTAACCAATCAGGTAGGAGAGGTTCTCCAGACGAGGGGTCCTTCGGCTTAACGGCTCTACTCATTTGTGAATCGAGGACTGATGTGAACGACTTGGGAATTGCTATTTTAATCAAAAAGGTGTCACTTTCTCTGTGATTATTTCTTCATCTACAGCCCAGGCAATGGTTTACTTCTGTTAAATCACATccacacaaaaagaaaactgcTTTCATTCAGAGATCCCTCGGACATGGTCCCACGTCAGGGGCGCCACAGCATCTTCGACAAGACAAAACTTTTGGGGAACCCCTGCTCTGGACAATTTCCAAAAATGAGCCAATGTATTTTCAGTGTCttacaaaatatcaaaatttGGAGCTTTGGCGAAAGAGTAACCATGGAGTATCAAATATTGAAATAAAACATCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229106 True 1447 lncRNA 0.39 1 26687379 26688825

Neighbor

gene id symbol gene type direction distance location
gabrb4 LOC107386622,LOC101472660,LOC103367791,LOC103394735,LOC103133907,LOC106949245,LOC107571379,LOC106523114,LOC107713123 coding downstream 153338 26297439 ~ 26534041 (-)
LOC120544066 NA coding downstream 411419 26270988 ~ 26275960 (-)
mpp1 mpp1 coding downstream 435510 26240349 ~ 26251869 (-)
pcolcea LOC103363028 coding downstream 466659 26214114 ~ 26220720 (-)
LOC120544213 LOC104942368,LOC103363032,LOC106949254,LOC108233826,LOC103475896 coding downstream 523672 26161865 ~ 26163707 (-)
si:dkey-175m17.7 LOC103363373,LOC104926337,LOC104958000,LOC102781095,LOC101468104,LOC102297217 coding upstream 14130 26702955 ~ 26721404 (-)
slc8a4a LOC103363370 coding upstream 46617 26735442 ~ 26759988 (-)
tm7sf2 tm7sf2,LOC102779860 coding upstream 98583 26787408 ~ 26801749 (-)
vps51 vps51 coding upstream 113432 26802257 ~ 26807914 (-)
frmd8 frmd8,LOC102779292 coding upstream 123380 26812205 ~ 26823192 (-)
G168963 NA non-coding downstream 6237 26677263 ~ 26681142 (-)
G168928 NA non-coding downstream 89745 26595893 ~ 26597634 (-)
G168907 NA non-coding downstream 154880 26529707 ~ 26532499 (-)
G168876 NA non-coding downstream 404197 26282854 ~ 26283182 (-)
G168856 tmem88,LOC104942396,LOC103394747,LOC105024597 non-coding downstream 483575 26201627 ~ 26203804 (-)
LOC120543914 NA non-coding upstream 364221 27053046 ~ 27056568 (-)
G169118 NA non-coding upstream 559990 27248815 ~ 27288981 (-)
G169119 abr non-coding upstream 584738 27273563 ~ 27284502 (-)
G169149 NA non-coding upstream 679384 27368209 ~ 27368910 (-)
G169173 NA non-coding upstream 736328 27425153 ~ 27426317 (-)
G168964 NA other downstream 2423 26681514 ~ 26684956 (-)
ammecr1 ammecr1 other downstream 74662 26574929 ~ 26612717 (-)
vamp2 vamp2,mpp1,LOC103367795,LOC104941032,LOC107742350,LOC107720682,LOC107082578,LOC107386619 other downstream 451185 26224819 ~ 26236194 (-)
pcdh1a LOC103357738,LOC108233889,LOC101479736,LOC102299879 other downstream 964161 25623735 ~ 25723218 (-)
LOC120544362 msi2,LOC103475888 other downstream 1782526 24655803 ~ 24904853 (-)
gng3 gng3,LOC107559409 other upstream 54 26688879 ~ 26693041 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other upstream 181725 26870550 ~ 26941207 (-)
emc6 emc6 other upstream 827065 27515890 ~ 27519001 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other upstream 979856 27668681 ~ 27701551 (-)
gusb gusb other upstream 1030174 27718999 ~ 27746458 (-)

Expression


Co-expression Network