tm7sf2 (tm7sf2,LOC102779860)


Basic Information

Item Value
gene id tm7sf2
gene name tm7sf2,LOC102779860
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 26787408 ~ 26801749 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777585.1
GGGTGTTTCCATCTGGGACTGCTGGATGGATGCATATTAGAATATCATTACAGTCCCAGCTGCACCTCCATGCTTTACACCGGAGACCAATAATGAAGGCAAACAGTCAAGCGCTCAAAAACAGATCCTCACATGACACCGAGAGGGAATTTGGAGGAACCCTGGGTGCCTTATGCATACCCATCTTTCTTCCGCTGACGGTGCTGTTCCTGATCTCTGTGAGTCGATCCCCTGAGGCCAGTGTGCTCCAGttgccccctcccctcccctctacTGAGCAGCTGTGGGACCCTCTGGCCCTCGTGCTTCTTCTGGGTTGGATCGCTCTGCATGCCCTCCTCTATGTGATGCCATTAGGAAAGGTGTCTGAAGGATTAGTGCTGAGGGATGGAACACGTCTCAAGTACCCCATAAATGGTTTTCACAGCCTGTGCATCAGCGGtgtgttgctgatgttgttAGTGGGGCTCGGGGCTCCTCTGGGGTGTCTGTTTGAGCTGCTGGTGCCTCTGGCAGTGTGTGCAATAGCAGTGTCATTCCTGTTCTCCGTCTACCTCTATATCCGCTCCTTTTGGGTTCCTTCTCATGCTCTCGCTTTGGGGGGCAACACAGGAAATCCCCTGTATGACTTCTTCATCGGTCGGGAGCTAAACCCCCGGATTGCAAAGTTTGACCTTAAATATTTCTGTGAGCTCAGACCGGGTCTGATTGGCTGGGTGGTCATAAACCTTGGCATGCTGATGAAGGAGGTGGAGCTTCGAGGTTCCCCGTCGCTCGCCATGATGCTGGTCAACAGTTTCCAGCTGCTGTATGTGGCAGATGCTCTGTGGAATGAGGAGGCTGTTCTGACAACCATGGACATTGTGCATGATGGTTTTGGCTTCATGCTGGTCTTTGGGGACCTGGCCTGGGTTCCCTTCACATACGGCCTGCAGGCTGCCTTCTTGGTTGTGCACCCACAGGCCCTAAGTTCACTCGGAGCAGCAACTATAATAACACTGAATGGTATCGGATATTATGTTTTCAGAAAATCCAACTCACAGAAGAACCAGTTCAGAAGAGACCCTACACACCCAAGTGTTGCAAGACTAGAGACCATCGCCACAGCAACAGGGAAACGGCTGCTTGTGTCTGGCTGGTGGGGTCTCGTTCGTCATCCCAACTACTTCGGTGACCTCCTCATGGCCCTGGCGTGGTCTCTGCCGTGTGGATTCTCACATATTCTGCCTTACTTCTATGTCATATATTTCACCGTCTTGCTGATTCACCGAGAGGCCCGTGACGAGAGACAGTGTAGGGCCAAATACGGACTGGCGTGGGACACCTACTGTCGCCGTGTCCCTTACAGGATCTTCCCTTATATCTACTGAACAGGAAAGCAGATGGGTGGAAAGGGACCTAAACTGTCTCACAATATCCTTGGGACTCTTCAAGTCCAAACTTGGCAATAACTTGAAAAGAAGTCCATTTTCAGTTAAACAGACCACAAATAATATCTGGTGCTGTTACTGGGAATCTACTGGGAGCTCCCAATTGTAATCAGCCTTGATTTGTCAGGCTGCGGTTCACTTACAAAATGGTGTATAATGGATCAATATTTCTAATTCATTGAATTTTGACTTTGAAACCTCACAGGAGTCTAATATAGGTACAGTCAGTCTTCAGACACTTGTCTCTTGTTCAGCTAAAAACATTCCATCATAAAAGGCTAAAGCTGTAGTACGTCTGAAAACAGTCTTGGCCTTGTGATTCTTTATCTCATAAAAATGAGAATGAGTATTTTTACCATCCTTGTATTTTTACAATGTCTGctttttttaagtgtgtgtatctgtgaaatacatttcaaataaacaaaacataaaacaaatagACAGAGAGTGAATCTCACAATGATATTGTGTTGATATGGGGGAGCTCAAATGTTTGTATGAAAATTTAAATCTGTGCCTTTTTTATTAAGCCTGTGAAGATGGCAGCTAATAGATGTGTCAGTTTTAATAACCTTTCCCAACCTGTTATCATCGTCCTGTTAAAATGGATTCTCTTTCCAGCTTTCAGGCCTCAATAGCACAAGTTCTCTGAGTCTCTGGGCTATTCTCTCATGGCTTCAGCTTGAATACGCTCTGTTCCAAAATACTTTGTAGGGACAAAAAGTACATGGGTTGTAAATGTCAGTCTGACTCAGGGGCTCCTGAAAAATAGCCACAGTCATCATTCAAGCGTTGCTCTTTCTTGAAGCGTTGAATCAGCATGTTGATTCACTGTGGCAGGTGTTTGTATTGTTAACGGACTGGTGCATCACCTTGAAGAAAGTTTTTTTGAATGGGTGCTTACTAAGTAGTAAATCTTCCATGATGTGATGTTATTATGGCCATGCAACTTGGTTCACGTGGCATTTTAAATGGAGTTTGGCTGTTTATTGCCCTATTTAAACATATTTAGGCCTCTATTCTATTAACAGGCAATGAAAGAAACAATTACATTTCCAATTATAAATCACTTTTTCATTTACACTGCAAATAATATTTCTCTCACATTGCAGTGAGGTGTGCACATACAGATGATAGAGCTCTTTCCTGATGCGcaccttcatttgttttttacctTTTAATCCTATTTACAGTACAGCTGCCCCTGGCCTTGCCTACACAGCACTCAAGctattctgtgttgtttttcatacgcTAAGTGCTAATTAGAAATGTGCTTGTACTGTATAATGCCATGGTTGTCTACGTGGTGGCTGGATTCATGCTgaataatacataatattctattttttggggg
>XM_039777586.1
TTTTCTTTCTGCAAAGCCGTTGTTTCTCTCGCGCTCAGATCATTTTAGCATCGGCAGGAGACCAATAATGAAGGCAAACAGTCAAGCGCTCAAAAACAGATCCTCACATGACACCGAGAGGGAATTTGGAGGAACCCTGGGTGCCTTATGCATACCCATCTTTCTTCCGCTGACGGTGCTGTTCCTGATCTCTGTGAGTCGATCCCCTGAGGCCAGTGTGCTCCAGttgccccctcccctcccctctacTGAGCAGCTGTGGGACCCTCTGGCCCTCGTGCTTCTTCTGGGTTGGATCGCTCTGCATGCCCTCCTCTATGTGATGCCATTAGGAAAGGTGTCTGAAGGATTAGTGCTGAGGGATGGAACACGTCTCAAGTACCCCATAAATGGTTTTCACAGCCTGTGCATCAGCGGtgtgttgctgatgttgttAGTGGGGCTCGGGGCTCCTCTGGGGTGTCTGTTTGAGCTGCTGGTGCCTCTGGCAGTGTGTGCAATAGCAGTGTCATTCCTGTTCTCCGTCTACCTCTATATCCGCTCCTTTTGGGTTCCTTCTCATGCTCTCGCTTTGGGGGGCAACACAGGAAATCCCCTGTATGACTTCTTCATCGGTCGGGAGCTAAACCCCCGGATTGCAAAGTTTGACCTTAAATATTTCTGTGAGCTCAGACCGGGTCTGATTGGCTGGGTGGTCATAAACCTTGGCATGCTGATGAAGGAGGTGGAGCTTCGAGGTTCCCCGTCGCTCGCCATGATGCTGGTCAACAGTTTCCAGCTGCTGTATGTGGCAGATGCTCTGTGGAATGAGGAGGCTGTTCTGACAACCATGGACATTGTGCATGATGGTTTTGGCTTCATGCTGGTCTTTGGGGACCTGGCCTGGGTTCCCTTCACATACGGCCTGCAGGCTGCCTTCTTGGTTGTGCACCCACAGGCCCTAAGTTCACTCGGAGCAGCAACTATAATAACACTGAATGGTATCGGATATTATGTTTTCAGAAAATCCAACTCACAGAAGAACCAGTTCAGAAGAGACCCTACACACCCAAGTGTTGCAAGACTAGAGACCATCGCCACAGCAACAGGGAAACGGCTGCTTGTGTCTGGCTGGTGGGGTCTCGTTCGTCATCCCAACTACTTCGGTGACCTCCTCATGGCCCTGGCGTGGTCTCTGCCGTGTGGATTCTCACATATTCTGCCTTACTTCTATGTCATATATTTCACCGTCTTGCTGATTCACCGAGAGGCCCGTGACGAGAGACAGTGTAGGGCCAAATACGGACTGGCGTGGGACACCTACTGTCGCCGTGTCCCTTACAGGATCTTCCCTTATATCTACTGAACAGGAAAGCAGATGGGTGGAAAGGGACCTAAACTGTCTCACAATATCCTTGGGACTCTTCAAGTCCAAACTTGGCAATAACTTGAAAAGAAGTCCATTTTCAGTTAAACAGACCACAAATAATATCTGGTGCTGTTACTGGGAATCTACTGGGAGCTCCCAATTGTAATCAGCCTTGATTTGTCAGGCTGCGGTTCACTTACAAAATGGTGTATAATGGATCAATATTTCTAATTCATTGAATTTTGACTTTGAAACCTCACAGGAGTCTAATATAGGTACAGTCAGTCTTCAGACACTTGTCTCTTGTTCAGCTAAAAACATTCCATCATAAAAGGCTAAAGCTGTAGTACGTCTGAAAACAGTCTTGGCCTTGTGATTCTTTATCTCATAAAAATGAGAATGAGTATTTTTACCATCCTTGTATTTTTACAATGTCTGctttttttaagtgtgtgtatctgtgaaatacatttcaaataaacaaaacataaaacaaatagACAGAGAGTGAATCTCACAATGATATTGTGTTGATATGGGGGAGCTCAAATGTTTGTATGAAAATTTAAATCTGTGCCTTTTTTATTAAGCCTGTGAAGATGGCAGCTAATAGATGTGTCAGTTTTAATAACCTTTCCCAACCTGTTATCATCGTCCTGTTAAAATGGATTCTCTTTCCAGCTTTCAGGCCTCAATAGCACAAGTTCTCTGAGTCTCTGGGCTATTCTCTCATGGCTTCAGCTTGAATACGCTCTGTTCCAAAATACTTTGTAGGGACAAAAAGTACATGGGTTGTAAATGTCAGTCTGACTCAGGGGCTCCTGAAAAATAGCCACAGTCATCATTCAAGCGTTGCTCTTTCTTGAAGCGTTGAATCAGCATGTTGATTCACTGTGGCAGGTGTTTGTATTGTTAACGGACTGGTGCATCACCTTGAAGAAAGTTTTTTTGAATGGGTGCTTACTAAGTAGTAAATCTTCCATGATGTGATGTTATTATGGCCATGCAACTTGGTTCACGTGGCATTTTAAATGGAGTTTGGCTGTTTATTGCCCTATTTAAACATATTTAGGCCTCTATTCTATTAACAGGCAATGAAAGAAACAATTACATTTCCAATTATAAATCACTTTTTCATTTACACTGCAAATAATATTTCTCTCACATTGCAGTGAGGTGTGCACATACAGATGATAGAGCTCTTTCCTGATGCGcaccttcatttgttttttacctTTTAATCCTATTTACAGTACAGCTGCCCCTGGCCTTGCCTACACAGCACTCAAGctattctgtgttgtttttcatacgcTAAGTGCTAATTAGAAATGTGCTTGTACTGTATAATGCCATGGTTGTCTACGTGGTGGCTGGATTCATGCTgaataatacataatattctattttttggggg

Function

symbol description
tm7sf2 Predicted to enable oxidoreductase activity, acting on the CH-CH group of donors. Predicted to be involved in sterol biosynthetic process. Predicted to act upstream of or within cholesterol biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nuclear inner membrane. Predicted to be integral component of endoplasmic reticulum membrane. Is expressed in central nervous system; gut; and liver. Orthologous to human TM7SF2 (transmembrane 7 superfamily member 2).

NR:

description
delta(14)-sterol reductase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K00222 TM7SF2, ERG24; Delta14-sterol reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777585.1 True 2790 mRNA 0.45 11 26787408 26801749
XM_039777586.1 False 2765 mRNA 0.45 11 26787408 26801605

Neighbor

gene id symbol gene type direction distance location
slc8a4a LOC103363370 coding downstream 27420 26735442 ~ 26759988 (-)
si:dkey-175m17.7 LOC103363373,LOC104926337,LOC104958000,LOC102781095,LOC101468104,LOC102297217 coding downstream 66004 26702955 ~ 26721404 (-)
gabrb4 LOC107386622,LOC101472660,LOC103367791,LOC103394735,LOC103133907,LOC106949245,LOC107571379,LOC106523114,LOC107713123 coding downstream 253367 26297439 ~ 26534041 (-)
LOC120544066 NA coding downstream 511448 26270988 ~ 26275960 (-)
mpp1 mpp1 coding downstream 535539 26240349 ~ 26251869 (-)
vps51 vps51 coding upstream 508 26802257 ~ 26807914 (-)
frmd8 frmd8,LOC102779292 coding upstream 10456 26812205 ~ 26823192 (-)
rom1a LOC108233807,LOC106511527,LOC100703904,LOC107091377,LOC101466262 coding upstream 22829 26824578 ~ 26829744 (-)
si:dkey-273o13.3 NA coding upstream 30028 26831777 ~ 26841834 (-)
zfpl1 zfpl1,LOC102778161 coding upstream 41925 26843674 ~ 26848132 (-)
G168966 NA non-coding downstream 98583 26687379 ~ 26688825 (-)
G168963 NA non-coding downstream 106266 26677263 ~ 26681142 (-)
G168928 NA non-coding downstream 189774 26595893 ~ 26597634 (-)
G168907 NA non-coding downstream 254909 26529707 ~ 26532499 (-)
G168876 NA non-coding downstream 504226 26282854 ~ 26283182 (-)
LOC120543914 NA non-coding upstream 251297 27053046 ~ 27056568 (-)
G169118 NA non-coding upstream 447066 27248815 ~ 27288981 (-)
G169119 abr non-coding upstream 471814 27273563 ~ 27284502 (-)
G169149 NA non-coding upstream 566460 27368209 ~ 27368910 (-)
G169173 NA non-coding upstream 623404 27425153 ~ 27426317 (-)
gng3 gng3,LOC107559409 other downstream 94367 26688879 ~ 26693041 (-)
G168964 NA other downstream 102452 26681514 ~ 26684956 (-)
ammecr1 ammecr1 other downstream 174691 26574929 ~ 26612717 (-)
vamp2 vamp2,mpp1,LOC103367795,LOC104941032,LOC107742350,LOC107720682,LOC107082578,LOC107386619 other downstream 551214 26224819 ~ 26236194 (-)
pcdh1a LOC103357738,LOC108233889,LOC101479736,LOC102299879 other downstream 1064190 25623735 ~ 25723218 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other upstream 68801 26870550 ~ 26941207 (-)
emc6 emc6 other upstream 714141 27515890 ~ 27519001 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other upstream 866932 27668681 ~ 27701551 (-)
gusb gusb other upstream 917250 27718999 ~ 27746458 (-)
LOC120544024 rnf43 other upstream 1128790 27930539 ~ 28027777 (-)

Expression


Co-expression Network