zswim7 (zswim7)


Basic Information

Item Value
gene id zswim7
gene name zswim7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27374901 ~ 27390229 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776815.1
CCTTATTGGCTAGCTATGCTACAGGAGCCGTTGACTTCCTGAAACAAAACGTTCTGAAAATCTTATAATATGTCCATGCTGAAAATGCGTTCATTTTTACCTGCAGTGGCCGAACAGCTGTTCCGAGATATTAAAAAGACATACCAGGAAACGTCCCAAAttcCTGATGACCTGCTTATTGCGTTGAAGTTTGTCTTTGGCCCTTGTGCGCTGCAGGCTTTGGACCTTGTTGACCAGCATTCAGTCACCTGTCTGTTATCTCCCAGCGGACGCAAAGCATTCCAGGTAATGGGAGGCTCGGGGCGTTTGTACACATGCTTTGTGTCCTGTCACTACTGCCCGTGCCCAGCCTTCGCCTACACCGTGCTCCGCAGAAATGAGGGCCCACTGTGCAAACACATCCTGGCCGTCTACCTGTGTCAGGCCATGGGTGGGGCTCAGCAGGAGAGCGTGTCGGATCAGCAGATGTCCTTGCTGCTTAGCGGGACGGAAGCCCTGTGACACCCACCAGGCGTGTTCAGTACAGCAGGTGGAGCAGCACACCCGCACGGACCCTCTTGGATGACAGCCGATGTTTTGAAGAGACACTTTGGGTAACTGCAGAGACGATTGGAGAATGGGAACACTACCATGGTCATTTGTCTCTTTGAAAGACTACAGATGTTGCTTTATTTATTCTTATGTTTCTTATGTTTCCAGGGAAACGACATCTGTTTGTTAGTATATGCGGCTTTATTTTTAGGTTATATTTATCTGAAGCGTCTGAATGCTGAAGGGACttcagaaacattttaaaagcatGTTTCCAATGTGTCATTTGTAAATATAAATTGTCATATGatataaagtatataaaattttagaaataaagactgATCCGTAACAATATAAACATTGCCtttattaacaaaataattCACCATACATACAGATTGCATCATGTTGAATAGCAGTATCAGTTTCGCTGTTGTAGTTTTGTTGAATGGAAGAAAGAATGGCCTCTGGAAAGGTTGAACATTAGCTTGACCACAGTGGATGTTTCTCCTGATTAGTAACAACACTAAAGCACACAAACAGATAGGTACTTCGGAATGAAAGGCAGGAATGTTGAACTAGATCAACTTGTTATTGTCCGTCTTACCTTTAAAATCGCAAAAGAAGGCAATAGTTTGACATCAATCGATAGCTTGTAGAAAGCCGGACACCTACAGTACTTATTTTTACACATCAGTCCACAAAGACAATAATATAACATTACAGTGCAGTTACAGTATAGATGTCTCCATTGGAATGTACTAAAACTTTGGCACACTCCTGTATTTAGCCCTTGAAGTTAGTCAGAGGTGGTACACTGGACACAATGGCAAATGAGGGGCATAGTGAAGCAGTGGAGGCAAGTGCTCAACTTAAGAACACTTgttaaacaccaacacaacatGTTTCAACACCGCCAATAAAGCACACCAAATGGGAAATAATTGAAAA

Function

symbol description
zswim7 Predicted to enable zinc ion binding activity. Predicted to be involved in double-strand break repair via homologous recombination. Predicted to act upstream of or within DNA recombination and DNA repair. Predicted to be located in nucleus. Predicted to be part of Shu complex. Orthologous to human ZSWIM7 (zinc finger SWIM-type containing 7).

NR:

description
PREDICTED: zinc finger SWIM domain-containing protein 7

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776815.1 True 1485 mRNA 0.43 5 27374901 27390229

Neighbor

gene id symbol gene type direction distance location
ncor1 ncor1 coding upstream 1301 27314554 ~ 27373600 (+)
cenpv cenpv coding upstream 73399 27298037 ~ 27301502 (+)
abr abr,LOC103375456 coding upstream 86468 27136017 ~ 27288433 (+)
trnav-aac_10 NA coding upstream 95180 27279649 ~ 27279721 (+)
aspa aspa coding upstream 243606 27117211 ~ 27131295 (+)
timm22 timm22 coding downstream 107331 27497560 ~ 27500438 (+)
p2rx5 p2rx5 coding downstream 114928 27505157 ~ 27515889 (+)
trpv1 NA coding downstream 141199 27531428 ~ 27548911 (+)
eral1 eral1,LOC102782944 coding downstream 196664 27586893 ~ 27593961 (+)
si:ch211-283g2.1 LOC104963922,LOC107387056,LOC108233828,LOC100700598 coding downstream 240037 27630266 ~ 27637033 (+)
G169095 ubb,ubc,LOC107553588 non-coding upstream 77124 27291945 ~ 27297777 (+)
G169060 NA non-coding upstream 293240 27038854 ~ 27081661 (+)
G169027 NA non-coding upstream 414262 26957695 ~ 26960639 (+)
G169018 NA non-coding upstream 535344 26838992 ~ 26839557 (+)
G169011 LOC108233807,LOC100703904,LOC106511527,LOC101466262 non-coding upstream 545217 26827103 ~ 26829684 (+)
G169157 NA non-coding downstream 34924 27425153 ~ 27426322 (+)
LOC120543667 NA non-coding downstream 86056 27476285 ~ 27477131 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding downstream 309889 27700118 ~ 27701522 (+)
G169215 NA non-coding downstream 322846 27713075 ~ 27713796 (+)
G169254 NA non-coding downstream 325166 27715395 ~ 27716931 (+)
G169042 stip1 other upstream 409861 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 687638 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 699106 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 806401 26543796 ~ 26568500 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other upstream 1151456 26000063 ~ 26223445 (+)
shpk shpk,LOC102781293 other downstream 129802 27520031 ~ 27531315 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 1406283 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 1491505 28881734 ~ 28942332 (+)
G169789 map6 other downstream 2555645 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 2621104 30011333 ~ 30113690 (+)

Expression


Co-expression Network