LOC120543677


Basic Information

Item Value
gene id LOC120543677
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3590311 ~ 3592122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776834.1
TTGTCACTGagcgagaggtgaaatggcccagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacaactactgcatgaactgtattaaaagccactggGATAAAGAGGATCGTAAGTACAGCTACAGCTGCCCTCAGTGCAGGAAGACgttcacaccgaggcctgtcctgctgaaaaacaacttgttagcagatttagtggaggagctgaagaagactggactcccagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCACACAAGTCCTGTTTGCAATGTCTGGCTTCTTTCTGTGAGCAACATCTTCAACGTCATTATGAATCAGCTCCattaaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcaacatgatgaggtgatgaagattTTCTGTCGTACTGATCAGCAGCTGATTTGTTATCTCTGTTTAATGGAggaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagcTTGAAGGGAGTCGACAAAACATCCAGCggagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaagcagtggaggacagcgagaagatcttcactgagctgatccgtctcctggagaaaagaatctctgatgtgaagcagcaggtcagatcccagcagaaaagTGAAGCGAGTCGAGTCAGAGAGCTTCAGGAGAAactggagcaggagatcactgagctgaagaggaaagacgttgtgctgaagaagctctcacacacagaggatcacacccagtttctacacaactacccctcactgtcaccactcagccaatcaacatccagcatccatatccatcctctgagctgctttgaggacgTGACAGCAGCCGTGTCAGAAGTTAGAGATATACTACAGGACGTCctgagagagaagaggacaaatgtctcactgacagggactgaagtggacgttttactgccacaaccagagcccaagaccagagctggattcttaaaatattcatgggaaatcacactggatccaaacacagtaaacacacagctgttattatctgaggggaacaggaaagcaacatTCATGGGAGAACAACAGtcttattctagtcacccagacagattcactgGCTGGTgtcaggtcctgagtagagaggGTCTGACTGGatgttgttactgggaggtggagaagagagggagaggagtttctgtagcagtcgcatacaaAAATATCAGCAGAGAAGGGGTGTCGGATAAATGTAGATTTGGACGaaatgacaaatcttgggcATTAGATTgggacaacaacaaatatacattttgttaCAACAATGTCCGAACACCCGTCTCAGGTcctaagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagctcCTCTATGCTGGAGTAAGGGTGTTTCGTTGTTCTTCTGGAGCCTgtgctgagttgtgtaaactgaaatagacagaagtcatttaagggttaaattctgtgttttaactctTTGACTTATTTAGCCATGTTTGTTGCTGAGAGATGATTGTTGTGTCATTCtattttttcgatgtttttcctgtgtt

Function

GO:

id name namespace
GO:0043009 chordate embryonic development biological_process
GO:0009792 embryo development ending in birth or egg hatching biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776834.1 True 1812 mRNA 0.47 1 3590311 3592122

Neighbor

gene id symbol gene type direction distance location
trnaa-agc_20 NA coding downstream 146393 3443846 ~ 3443918 (-)
trnav-aac_4 NA coding downstream 157733 3432506 ~ 3432578 (-)
trnai-aau_27 NA coding downstream 165626 3424613 ~ 3424685 (-)
trnav-cac_1 NA coding downstream 173873 3416366 ~ 3416438 (-)
trnav-cac NA coding downstream 180433 3409806 ~ 3409878 (-)
LOC120543676 NA coding upstream 5589 3597711 ~ 3599732 (-)
LOC120543685 LOC106675582 coding upstream 11322 3603444 ~ 3604114 (-)
LOC120543675 LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 coding upstream 33608 3625730 ~ 3639477 (-)
LOC120543681 NA coding upstream 71707 3663829 ~ 3664776 (-)
LOC120543683 NA coding upstream 269647 3861769 ~ 3867234 (-)
G163032 NA non-coding downstream 18058 3572005 ~ 3572253 (-)
G163029 NA non-coding downstream 21658 3568140 ~ 3568653 (-)
trnav-uac_20 NA non-coding downstream 49288 3540951 ~ 3541023 (-)
LOC120543686 NA non-coding downstream 51476 3525192 ~ 3538835 (-)
trnas-uga_24 NA non-coding downstream 51845 3538385 ~ 3538466 (-)
G163055 NA non-coding upstream 67840 3659962 ~ 3660294 (-)
G163057 NA non-coding upstream 100827 3692949 ~ 3693160 (-)
G163072 NA non-coding upstream 192640 3784762 ~ 3786728 (-)
G163090 NA non-coding upstream 232348 3824470 ~ 3856548 (-)
G163267 NA non-coding upstream 301391 3893513 ~ 3893888 (-)
LOC120544249 alg8 other downstream 357029 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 392063 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 494837 3037923 ~ 3095474 (-)
G162910 NA other downstream 760717 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 938908 2342150 ~ 2651403 (-)
G163259 NA other upstream 278203 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 555741 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 689651 4281773 ~ 4821872 (-)
G163334 NA other upstream 710444 4302566 ~ 4304048 (-)
G163315 NA other upstream 742721 4334843 ~ 4820499 (-)

Expression


Co-expression Network