slc25a1a (LOC100703167,LOC103365133,LOC101468784,LOC102305052)


Basic Information

Item Value
gene id slc25a1a
gene name LOC100703167,LOC103365133,LOC101468784,LOC102305052
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 20823026 ~ 20827967 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777011.1
CGCACACACACCGCCACTGGTGCACCttcctgtgttgttgttgtctgaCATATTGTCCGAGTGGGACCATTGCCACAGTGGGAGATTTCTATAACCAGCCCCGGCGACCAAAATGTCGTCCCTATTGAAGCCGTTTTCGGTGTTTGAGGGACCGTGCGATAGTTGCAGTGTGAGGAGAGCATGCCGGAGCTCAACTTCACATCAGCAGCCTCCGTCTCAGCGTCTGGCCGCCGCGGCGGGGCTGGGCTTCTTGCCGGCCCACCAGCTGCCTTACGCGGCGAGGAGAAACCTCGCGGCTGCTGCAGTCGGGGGGAGGAAAATCACGCATCCTGGAAAGGCCATCCTTGCAGGTGGCATTGCAGGAGGAATAGAGATCTGTATCACCTTCCCCACAGAGTATGTCAAGACCCAGCTGCAGCTAGATGAGAGAGCCAACCCACCGCGATACAGAGGGATCGgcgaCTGTGTGAAGTTGACTGTGCAAGATCACGGGCTCAGAGGGCTGTATCGAGGTCTCAGCTCCCTGCTCTATGGATCAATACCCAAGTCTGCAGTGAGGTTTGGCACGTTTGAAATTCTCAGCAACCCAATGCGAGACGCCACAGGTCGGCTAGACAACACGCGAAGCCTCTTGTGTGGCTTAGGAGCAGGTATAGCGGAGGCCATCATGGTCGTCTGCCCCATGGAGACACTCAAGGTGAAGTTGATCCATGACCAGTGTTCGCTCAGACCTCGCTACAGAGGCTTCTTTCACGGAGTCAGTGAGATTATCAGAGAACAGGGTGTGAGGGGGACGTATCAAGGTCTGACAGCGACTGTGCTCAAACAAGGAACCAATCAGGCCATCCGATTCTATGTGATGAACGCGCTGCGCAATTGGTACAAAGGTGACGACCCAGGACGAGACATGCACCCAATTGTCACGGCGATGTTTGGAGCGACGGCGGGAGCAGCCAGTGTTTTTGGAAATACACCTCTGGATGTGGTAAAGACCAGGATGCAGGGTTTGGAGGCCCACCGCTACAAAAACACAGTGGACTGTGCCTTCCAGATCCTGAAGCATGAAGGACCACAGGCGTTCTACAAAGGAACAGTTCCCAGGCTTGGCCGCGTGTGCTTGGACGTGGCCATAGTCTTTGTCATCTATGAGGAGGTGGTCAAACTACTCAACAACGTGTGGAAGACCCAGTAGATCGGCCAGACTGCGACAGAGGTCCAGAGGGAAGCACAGACCAGTGCCTCATGCTACGCACAACTGAACACCTCTATTCTAGTTCATACTAGCTCTCTGCATTGCCCTGGGCAGATGGCACTTCATCATTACCAGCTCCCACTCtgttacataaaaataaatgcaggACGTATCCTTAAAACCGGCGATaaaagaaagggagggagaggggctCAGTTTTGCATTTCTCAGCTTTCTCTTTCGTGGTCACTTAGTAATCAAGagggatcattttattttggatgACAGGAAAAGGCAAAGTCGAATGTTTCTTGAGTCTTATTACCAGAAAAAGTATTTAGAGAAGAAACACgcatatgattattattattaccaaaGGTTCACATTagagggaggagaaaaaaaaaaacttggttaAGAAAGGGATATTACGTATGTCTAATGTTTTAGCTTTCAATGACTGTTGTTATGGTACAGAGTTGTAGAGTGAACACTTTGTACTGAAACCATATAAGTGTCTTTTGATTCACGGAGTACTTATTATACTGAGTGAAGAACAGAGATGCTACTGGACAGAAACGAGCTCGCTGCagtactttaaaatgtttgtgcagtacttttacactttgtgttgtaattgcTTACCTGACTGTGCTTGTAGTGTCGGCTCACTAAAACATTTGCGGTATTTCCTTGCTGTGTCATGGTGATGAACTTTCGATTCGGTTCATTGTGCATTTAATGGCCTGCTGCTGAGTATGGCTGCATTGATCTTGATGTGGCATCTGTCCTGCTACCTGCCGACTGATAACAGGACTCGCAGGCTTGTCAAGGCTACACAAACTGGTCTGGAGTCAGTGTGGAGTGTTACAACCTGATACAAGTAGTCATGAAGCACACATTGTAGGAAACAAATCCATATGTAGCACTATCTTCACATGCAGTCTTAAGAGGAGATGAAAGTCGTTAACAGAAGTTAGTGAgcttgttattacatttttaaacatcaGACAGGTTACTGAGCGCTTCGGTAGGTGGTTGAGTTCTCTACAGCTGTATGTGAAGGCtttcttttgaaatatttgACCAGTAATGCTTTGTTCAGAACCTCAGTCAGTCTGCTATTTCCAAGCAGGTGCTGAAACATAAGTGAATTCACTTCTACTCAAGATGAGATGACAACATGTCCGACTATGTAAGCCATATGACTTCAGTGCGCTTGAGCCTTGAGTGTTTCTTGTGCTTATTGATTTATTCATCCAACAGACTGTCCTCTAGTCTGATATTATGTCACTTTGATATTCTTTGTTTACCTCAAGCTAACCTGCTTCACAAGCCTTTTTTATGCTAACCAATGAAATTTGCAATTTGAACTTTGAATGCACTTATTCTTGTCTAATAAAGTGTTTACATGTGTTGAGCGACAACAAGGGAAAGGTAGATATATCAGAGGCTCGATAACATAAGTGGCTGGTATTTAAGCAAGGCTTGGTTTTGATGGACCTAGTTGCACCACACAAGCCTTTTACTCCTCTTTGCCAAACTACTTCAGTAGAATCTCCAATGTAGTATCCCTGATAGGAGCAAatctttattacattttaaaccaAGAGCAACATATTATTTAATCTttactgttttgttttcattaactAACGCACATTTTTACTGTATATAATCTTTGCTGCTTTTCATAAAAAGGCCAACAGCATGTGTATCTCATCGTACAAGATTTGATCATTCACGTTTCAGAACATCCTGTTGTGCAGAATGAGGAAATTTTGTGGAATATGTTGGTAGGACGTCAGAAAAAATGTATGACTTACATGATCAGATGTGGAAACctctgaaaaaaatatttagacaTAACATGGTTTCAATAAACTGATTGATAAATCCAA

Function

NR:

description
PREDICTED: tricarboxylate transport protein, mitochondrial

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0010821 regulation of mitochondrion organization biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15100 SLC25A1, CTP; solute carrier family 25 (mitochondrial citrate transporter), member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777011.1 True 3093 mRNA 0.45 9 20823026 20827967

Neighbor

gene id symbol gene type direction distance location
tmem135 tmem135 coding downstream 74087 20741684 ~ 20748939 (-)
ltn1 ltn1 coding downstream 83928 20725333 ~ 20739098 (-)
paxbp1 paxbp1 coding downstream 595355 20214841 ~ 20227671 (-)
slc7a1a LOC103354469 coding downstream 608536 20195444 ~ 20214490 (-)
mtus2a NA coding downstream 628609 20138733 ~ 20194417 (-)
LOC120543779 NA coding upstream 2704 20830671 ~ 20834162 (-)
LOC120543780 NA coding upstream 7417 20835384 ~ 20837767 (-)
si:dkey-175g6.2 LOC102077569,LOC102798461,LOC102202845 coding upstream 17469 20845436 ~ 20849920 (-)
slc47a1 NA coding upstream 69076 20897043 ~ 20910064 (-)
birc2 birc2 coding upstream 164230 20992197 ~ 21004010 (-)
G167083 NA non-coding downstream 19059 20801207 ~ 20803967 (-)
G167055 NA non-coding downstream 22612 20732338 ~ 20800414 (-)
G167081 pitpna,pitpnab,LOC106514104,LOC108237022 non-coding downstream 26808 20794519 ~ 20796218 (-)
G167080 LOC105031021,LOC103395107,LOC108276543,LOC107720580,LOC107684996,LOC107556875 non-coding downstream 29412 20784519 ~ 20793614 (-)
LOC120543858 NA non-coding downstream 299724 20522308 ~ 20523302 (-)
G167148 cct8 non-coding upstream 98656 20926623 ~ 20928152 (-)
G167152 NA non-coding upstream 103440 20931407 ~ 20933984 (-)
G167176 NA non-coding upstream 153756 20981723 ~ 20982937 (-)
G167179 NA non-coding upstream 159245 20987212 ~ 20987918 (-)
G167316 NA non-coding upstream 418918 21246885 ~ 21248228 (-)
G166843 NA other downstream 1023093 19746178 ~ 19799933 (-)
G166840 sod1 other downstream 1103303 19714639 ~ 19719723 (-)
haus1 haus1 other downstream 1146836 19672078 ~ 19676190 (-)
LOC120544038 LOC103365242 other downstream 1232576 19505249 ~ 19590450 (-)
trim3b LOC103365246,LOC108236989,LOC101465843,LOC102308808,LOC104963483 other downstream 1374733 19412189 ~ 19448293 (-)
G167129 aldoc other upstream 116034 20944001 ~ 20952534 (-)
snrnp35 snrnp35,LOC102792111 other upstream 245086 21073053 ~ 21090447 (-)
G167416 NA other upstream 746251 21574218 ~ 21584182 (-)
brd8a brd8,LOC104924599 other upstream 894351 21722318 ~ 21741824 (-)
LOC120543962 LOC103368266 other upstream 1016730 21844697 ~ 21863744 (-)

Expression


Co-expression Network