LOC120543962 (LOC103368266)


Basic Information

Item Value
gene id LOC120543962
gene name LOC103368266
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21844697 ~ 21863744 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227049
ACCCGAACAACCTTTATTTTTTGTACAATTAGGTTATCAATGTAATAAGACATATTCCAATGGTATGTTGCCCCATGATCAACAAGTCAATATCAGAACAAGCCAACAGACTGGTCCAAGTTCAGTTTAacaacttcaaaaaaaaaagttattatagCTTTCAAACAGAAGGGACACCATGGCACAGTAAAGTGGTCCAAAAAGCTTTAAACTCCCCTATGCTGCAAATAAATCTTACATCTACATTTCTAATTATAGTTTTAAGCGTTTGTAAGGTTTTCTTAGCTGCCAAAGCACTTTTGATGAAATGTCTTCATGTAAATTACTTCTAAGTGTTAAATAAAAGGAATTACATCCACATTCAGCTTAACTAATTAGAGCAACAAACTAGATTATTAACACAACTGTACAAACCTTTATCATTGGCTGTATCTACATTGTATTCCGGTTCACTGTTCATATTGACAtgcttttcttaaaatattccaaGGGTGTCCTTGATTATTATTCGTCAATTCCATTTCTTTTggataaaaacaaaagtcaacATTCCCCCCCAAAACACTTTATTGAAGAGATCAAAGAAAGTATCTCAAGTGTGACCAAACAGCATTTGGTTAAATTatattgaataaataaatgtaacccGAGTCCCACAGGGTTGATCACGAATAAACGTgctgtgtactgtatatgcaagCTACATTCACTGTCCTTTACATGCACCTAATACagtcttaaaaaaaacttaaaatatatCAGGAGAAACCAAAAGGTGCTAATAAAACAGGACATAAAAACAGCACAAGCACAAAGGTGGCAAAGTGGTGGAATCATTTcccttttaaaacacatttggacTTAAACACTTCAGTCTCACTGGGCATGGTCACATTGCGTTGATACAATCTGAAATAATCAAATCACATTGAAGAGGCAGTAACAAAAACAGCTTAAAAGCAACTCCGTTCAACTATGCTGAGGCTATATATTGGCCTATCACACGACATGAGCTCATTACTCAAAAGTGAAGAACTTAGAAAACCTAAAGAAAACAAGAGAACACACCTGTTGAGGATGTAAGATGAGTTACACCACATTATCAGTGTATCTAATCACGGTTTAAACATCGAACAGTTCCTTCAGAGTACATGCAAATGGACAATCCAAATTAAGTAACAAACTAAATACAACAAACGTTGTAGCAAACAATggtaaaaactaaaacaaggaAGAGGAAGATTAGGGTAGAATGGGGTTATTTGAGAGGGGATAAAACCGCCATTGTACCCCTAAGATGTGGTCAGACTGAATGTAAAGTCAATTTCATCTTAATTCATTCACAGTAACTTGACTGTTGGAGCGTTTTGCAATCCATGCCTATTAACTAAAAACAGCCAATTGCTGTACAGTTGTTAGTTGTAGTGAGTCAGCCGTGGCTCACCAACAACAGGCATGGACTGTCACGAGTGTGTGGAACAGTGCACTCtatacattttattcttgtacGTTTTTTAAATCCTGCCCCTTTTTCAAActatttatagttttttttttgtttaagctttattatattttcattatttgttttgtaagGAAGACTGGCAAAGCAAGCGTTTCATCGCATGGTGTAAGTTGTCTTtactgtgcatatgacaataaacctCTTGAATCTCTTTTTATATTTCTCCAGCTAAACTCTTTAAATTTTAAAGCCCACATAAAAATGCATTTATCCAAACTTTGTGTTGCATCTAATTTTTATGTCACGTTCAGTCTGAACACACCTTTAAGGCTACAGCAGAAATGGGAGGAGCATTCACATTCCAGCTGCTGAGGATTCAAGCAGAGAAGACAGGGGGTCTTTACTTCTTCCATACAGAGTAGAAAACTGCTCCAAGTAGGAGGGCACACATGTCACCTCTTTGGAGAATGCCACCGGACACGAGAGCTTCCCCAGCTGTTCCTCATACAGACTCAGTGCCTCTGTCAGGGTCTCGGCGTTACCCTGGTAACCAGTAccagggggagaaaaaaaacgtcaCGAAAAATGACTTCTCTCTCCTTGTTAGCCAGTTTCCCCATTCCATAAAATATTCCCATTTGAAACTAATTTTTATATTAAGATATTGACCACAAAGCTTAAATCTAAAACAATTTCATCCCATCTAATTTAACACCATTCTCTCCTGGATTGATAACCCACTGGTTTAACTATGCTCCGTTCCCTCCTTGTATTATTTCCTGCCCAGATATCCTGTTCCAACAAGAAATTCATCAAATGAAGGAAGCTTCTCTGAAAATGCCATTCCACTCGGGTTTTAGAGATAGTCTCAGGGATGCAAACGTTTTCAGTAGAAATGGTTAAGGGCAGATTGGAGCATCAGCTGTCAGTTTGCACTAAACATACTCAGCAGTTACTAAATATAGACTCACCTGTGTAAAATATTTCCCCGAGggatgcaggacttttattgACAGATCTAAGATTAGACGCAGGAACTCCCATGTAGagtctacaaaaaaaaacacagacaggttTAAACAAGTTAAAACGAGCTGCATTTGTGCAACACCACagagtatacagtatatgtataaatactatacagtataaaaaattaaatacaaaaacctTCTTCTGGCTGCGTGGATATTGGGATTGCAGTCAGGTCATTGATGACGTAATCAAACGTCTTTCCTTCCTGGACATACTTCTTCAGCACAGGGACACAGTCCTCTACTAGTATCTGTAATGCAGGAGACGAGGAGAATCCACTTAACTTTCCTCTCAAGTTTCTTTCATTTAGAAAATGTGCTTAATACATAACTTTGCTCTCGTTTTAAATGAAGTAAAATCTCAGACTGTCGCCATTGTGTTTATCTAGTGCACACACAGTTATGTATGACCCAATACACAGTTCTAACAGTGGCGTCACACTGATCAAGAGGTGGTGGTAACCGGCCAAGAAATGCTGCAATGTGCCAGCAAAGACAGGGAAGAATAAGACTGCAAGCTAGTAAACATGGATGTGCTGGATTTGAAATACTGAATCTGctttgtaaaacattttctcaataGAAGGAAATGCTGTCAACAACCACACAGGACCCCTTTAACAAAGCCAGTTGATGAACCAGTTTCAT
>XM_039777403.1
GGACATTAGTTCTGCACAGCAATCATTTTGGATGATAGCACAACACAATGGGCCTTTTCTGATATGGTGTGAAGTTAAAAAGATTCTGTTCAGGGGGTGGACAATTGTTGAGCGAGGTTAAGGTAAAGTGAATGCAGGCAGTCTACCATTTCAGGTTGAGGTTTCAGGGGCGTGCCACATGTGTCAGCTGTTGATCCTGAATGAGAAAGTCACAGTGAGCTCACACAGTAGCCTGCCAACTACGATAGAACCAACGAATTTCTGTGGGTTAAGAGAAGAAAATGCACATCTAATGTTTGTGgtttggcttttttttccaAGGTTGGAGTTTGCCCACAGGGAGTTATGTTCCATGAAAATGatggaaaaaataatgaaatctACCAGCATTTGTTCTGATGGATCTTCATGTCGGTACATGTTCGCCACCTTTGCCAGAGTGAAGAAACCAGGCTCACATCTATACTGGTTGCACATACTTCTGCTGGTCGCCCTATTTGCAGGTCAGGCATCCTGTAATGGGACCTCTGCTGCTCCTTCCCCTCTTCCCATTGCTATAACAAATGCACAGACTTCAGTATACTTCTTAGTTGATGTCACCGTGGATGTCAGTGGACAAAAGAATGAATCAGAAATCATTGCCTGGCTGAATCAGGCGTTCCAAAACAATTTGCAGAGCTGCGTGTCTTCAAACCAAGGAACAACTGCCACGCCTACCTCCCCACAAACTACATCTGCAAGCACTTCAAATGAGACGACACTCATGATGACAGCAACAACAATGTTACAGATCAACAACACAACTACAGCTTCAGCAACAACATTACAGATCAACAACACAACTACAGCTTCAGAAACAACATTACAGATCAACAACACAACTACAGCTTCAGAAACCACAACGTTACAGAGCAACAACACAACTACAGCTTCAGAAACCACAACGTTACAGAGCAACAACACAACTACAGCTTCAGCAACCACAACGTTACAGAGCAACAACACAACTACAGCTTCAGCAACCACAATGTTACAGAGCAACAACACAACTACAGCTTCAGCAACCACAATGTTACAGAGCAACAACACAACTACAGCTTCAGCAACCACAATGTTACAGAGCAACAACACAACTACAGCTTCAGCAACCACAACATTACAGAGCAACAGCACAACTACAGCTTCAGCAACCACAACATTACAGAGCAGCAACACAACTACAGCTTCAGCAACCACAACATTACAGATCAACAACAAAACTACAGTTGAAGCAACCCCAAAGTCACAGAGTAACAACAAAACTACAGTTGAAGCAACCCCAAAGTCACAGAGTAACAACAAAACTACAGCTGAAGCAACCCCAAAGtcacagaacaacaacaaaactacAACTGCAGCAACCCCAACGTTACAGAGCACAGCACAGTTAAAGAGGATAGCTCGTCAAATTCGGGACAGTGTGACACAAACCAGTCTTTTTTTCAGTGCAGTCAGTATTGACATATCAACTGGCCTATTTCAAGGAATTAACGTTTCATGCACCCCAACGACTGCAACAATAAACATCAACTGTTCTGTGATGCTACAGCTGAAGCAGAGCATCCCATCATGTTGTATCCTGAGTACGCTCTGTGCGGCAAGTAAAACATCTTCTGACATCCATGTGGTGGGAAAAACAGCAGGTCAAACGAATCCACTACAAAATCAGTGCAATAACACTATGCAAGAGCAAAACAGTTGCATTTATACTGGTCAAGCCGGTGCATCATGTGAAGAGTCAGTGACTGCATATGTGATGCCTCAACCCAACTCATCTCACTGTGGTGCAGACACAGGGAACAACACCTGCAGCTGCTCTGCTTATTGCAGTGTGCCTAatgCATACTACACTTTTCAAATTTCAATACAAGATtccaatattaacttttcaTATATCTCATCCGTGATTTCTAAACTTAAACAACAACCAGCATGCCCTTCAAGTGGAGGTGTTTCATGTCCATTGTCTATCATTGCATCTGAATATAAGGATGTCAATGTGGATTGTGGAAGCACAGCAACAACTCTTCAAAGCTGCAAAGTCATTTTAGGCTTTGGCCATGAGGTTCCTATCTGTAACGTGTCAGCAGCCGTGATTTATGTGCTTCAGTCTGAGAAAGGAATCAGTTACAATGGAAAAGTGACCCGAGCAGCAATTTGTGGAAATTCAGAAGTCAGCGACAATTCTGAGTTTGTGTGGTTTACCATTAACCTACAGCCTGCTACCTTTTGTACAACAATAGAAGCATCTTACACCCTCACTTGTCAAAAGGGAATCAATATGGTTTTGCAGCTAGAAGagcagtgtgttcagggggtgTTTACTACACCCAGCCCAAATGTGACAACAGCACAACCAAACACCACCACCTGGTCTGTAAATGTAACTTCATCCCCGCTGAACACAACAGCTCAAGCCCTGAATGCCACCACCACTGCTGCTAATGTCACGGCAACAGCTGAAAGCCAAGCCAACGCACTGCTTGAGCTGACCAGAGACGTGTCTGAGCTGAACTCCAGTCAGGTGAATCAGCTGGTGTCTCAGCTGGAGAAACTTTTGTCAGGCCCGACCGTCAGTCTGGCACTGGGGAACACTTCCATCCACGTTGTCAGCAATCTGCTGGGTGCTTCTCCTGGGGTGCTGTCAAACTCCTCCAACAGGATTATAGGGATTGTTGACACAGTGGGGTTGAAGCTGGTCCTTAATGGACAGGCTAATACCCTCTTGTCCCCGGATGTGGCTCTGTCTGTGAAACCAGCAAATGGCAGCAACTTTCAGGAAACAATTTTCTCCATCTCAGACCCCAATAATGTACAGGTCCGTGGGGATCCTAGGCTCAGAAGAAGCGTGAGAACAGATCCCTCCATCCCTCAGGGCTCCATCACGCTGCCCTCCTCTCTCACACAGAACCTGACTACTGAGCAACAGCAGCTTGCCTCCAGAGTCCAGTTCAATTTCTACCAGAAGAGCACAGTTTTCCAGGATAGATCTTTGGGAAAACGCAAACTTAATAGTGGCATCCTGGGAGCGAGTGTGGCCAACCTGTCAATCACAAAACTGCAAGACAATGTTATAGTTCACCTGAGGAACACAGAACCCATTCCCGCTAATTTTGTGGCTACATGTGTTTTCTGGGACTTTACATTAAATGATGGATCAGGTGGTTGGAATCCAACAGGCTGTTTTGTCCAAAACAGCACAGACAGCGAGACAATTTGTGGCTGCAATCATTTGACCAGTTTTGCTATACTGCTGgacCTTTCCAAAGAGCCTGTAACAAGTCGTCTACAGGACAACATTCTTACCTTTATCACATATATTGGCTGTGGAGTCTCTGCCATCTTCCTGTCTATCACCCTCCTCACCTACTTGGCCTTTGAGAAGTTGCGGAAGGACATTCCATCCAAAATCCTTATCCAGCTGTGCctggctctgctgctgctgaactTGGTCTTCCTGGTGGATGCATGGCTGGCTCTCTACCCAGACGCTGTGGGCCTCTGCATCTCCACTGCCTGGTTTCTTCACTACTTCCTGCTGGTTACCTTCACCTGGATGGGACTTGAGGCCGTCCACATGTACCTGGCCATCGTGAAAGTCTTCAATAGCTACATATCACACTACATGCTGAAGTTCTCGCTGGTCGGCTGGGGTGTCCCGATGATTGTGGTCATTATTGTCATTGCTATTGACAAGAATAACTACGGTCTCGTCTCCTATGCAAAGTTTGCAGATGGCTCTAGTGATGACTTCTGCtggctgaaaaatgacattgcTTTCTATGTGGCAGTGGTGGTCTATTTCTGCATCATTTTTCTGTTTAACCTTGTCATGTTCGTCGTGGTGTTGGTCCAGCTGTGTCGGATAAAGAGACAGAACCCTCAAAATTTGCAGCACCGCAACACACTGCAGGATGTGCGAAGCGTTGTCGGGATAACAATGCTCCTGGGCCTCACTTGGGGCTTTGCTTTTTTCGCCTGGGGGCCTGTGAACCTGCCATTCATGTACCTCTTTACCATCTTTAACTCCTTGCAAGGTTTCTTTATATTTGTGTTCCACTGTGCGGTGAAGGAAAATGTGAGGAAGCAGTGGAGGACCTACCTGTGCTGTGGCAGAATGAGACTAGCAGAAAACTCAGAATGGAGCCGCACTGCAACACAGAAGACTGTGAAGAAGTCATCAGGGATAAGACTAAGATCTCATCATTCCTCAAATTCTTCCCAATCCAACAATTTCTCCAGCTCCTCTTTCCTCGTCAATGACTCTTCAGAGCAGATTAATGGCATTGGTAGCCCATTTGAAGACAGATCAATCATAGCGGATGAAGTCCCCGGTACGGATGTGGTCCTCAACGAGATCAACAGGCAGTACAGAACCCAACAAGCCTGATCCAAAAAGGACATCAGAATTTTGAATGGTCCTTATTTTGAAATACTTATGTATGTTAATAGAGTAAATTATGTACTGTCCATCTGCATGTCATACATTATACATGGCACTTGATTATACATTTACCTATATTCATACTTTTAATTATATTTGCACAAGGAACCCGAACAACCTTTATTTTTTGTACAATTAGGTTATCAATGTAATAAGACATATTCCAATGGTATGTTGCCCCATGATCAACAAGTCAATATCAGAACAAGCCAACAGACTGGTCCAAGTTCAGTTTAacaacttcaaaaaaaaaagttattatagCTTTCAAACAGAAGGGACACCATGGCACAGTAAAGTGGTCCAAAAAGCTTTAAACTCCCCTATGCTGCAAATAAATCTTACATCTACATTTCTAATTATAGTTTTAAGCGTTTGTAAGGTTTTCTTAGCTGCCAAAGCACTTTTGATGAAATGTCTTCATGTAAATTACTTCTAAGTGTTAAATAAAAGGAATTACATCCACATTCAGCTTAACTAATTAGAGCAACAAACTAGATTATTAACACAACTGTACAAACCTTTATCATTGGCTGTATCTACATTGTATTCCGGTTCACTGTTCATATTGACAtgcttttcttaaaatattccaaGGGTGTCCTTGATTATTATTCGTCAATTCCATTTCTTTTggataaaaacaaaagtcaacATTCCCCCCCAAAACACTTTATTGAAGAGATCAAAGAAAGTATCTCAAGTGTGACCAAACAGCATTTGGTTAAATTatattgaataaataaatgtaacccGAGTCCCACAGGGTTGATCACGAATAAACGTgctgtgtactgtatatgcaagCTACATTCACTGTCCTTTACATGCACCTAATACagtcttaaaaaaaacttaaaatatatCAGGAGAAACCAAAAGGTGCTAATAAAACAGGACATAAAAACAGCACAAGCACAAAGGTGGCAAAGTGGTGGAATCATTTcccttttaaaacacatttggacTTAAACACTTCAGTCTCACTGGGCATGGTCACATTGCGTTGATACAATCTGAAATAATCAAATCACATTGAAGAGGCAGTAACAAAAACAGCTTAAAAGCAACTCCGTTCAACTATGCTGAGGCTATATATTGGCCTATCACACGACATGAGCTCATTACTCAAAAGTGAAGAACTTAGAAAACCTAAAGAAAACAAGAGAACACACCTGTTGAGGATGTAAGATGAGTTACACCACATTATCAGTGTATCTAATCACGGTTTAAACATCGAACAGTTCCTT

Function

NR:

description
PREDICTED: G-protein coupled receptor 64-like

GO: NA

KEGG:

id description
K08451 ADGRG2, GPR64; adhesion G-protein coupled receptor G2

RNA

RNA id representative length rna type GC content exon number start site end site
TU227049 False 3147 lncRNA 0.37 2 21844697 21848643
XM_039777403.1 True 5733 mRNA 0.43 30 21847501 21863744

Neighbor

gene id symbol gene type direction distance location
nfrkb nfrkb coding downstream 80039 21753406 ~ 21764658 (-)
cxxc5a cxxc5,LOC103356789,LOC100712281,LOC105919858,LOC103141297 coding downstream 172443 21654177 ~ 21672254 (-)
nrg2a nrg2,LOC100711745,LOC102211978,LOC102784840 coding downstream 284276 21490119 ~ 21560421 (-)
LOC120543925 LOC100710932,LOC102785624,LOC101481487,LOC103395730,LOC102210535,LOC103356781,LOC108236962 coding downstream 421217 21296915 ~ 21423480 (-)
LOC120543861 pcnx3 coding downstream 551383 21268368 ~ 21293314 (-)
gabrr3a gabrr3,LOC103368263,LOC101072487 coding upstream 3710 21867454 ~ 21876379 (-)
si:ch211-244c8.4 NA coding upstream 43730 21907474 ~ 21912005 (-)
LOC120544412 LOC104924591,LOC104966489,LOC103368267 coding upstream 51785 21915529 ~ 21919381 (-)
LOC120544506 LOC103353342,LOC102194250,LOC102779483,LOC101466084 coding upstream 57463 21921207 ~ 21928428 (-)
LOC120544344 NA coding upstream 73775 21937519 ~ 21942289 (-)
G167515 sms non-coding downstream 14 21844151 ~ 21844683 (-)
G167498 NA non-coding downstream 50158 21792110 ~ 21794539 (-)
G167461 NA non-coding downstream 131263 21659345 ~ 21713434 (-)
LOC120543579 NA non-coding downstream 196712 21644687 ~ 21647985 (-)
G167420 NA non-coding downstream 235932 21587878 ~ 21608765 (-)
G167580 NA non-coding upstream 73949 21937693 ~ 21937940 (-)
G167590 LOC103353336 non-coding upstream 122875 21986619 ~ 21987487 (-)
G167591 NA non-coding upstream 127202 21990946 ~ 21994466 (-)
G167579 LOC101469595,LOC102299651 non-coding upstream 148955 22012699 ~ 22015678 (-)
G167678 NA non-coding upstream 434114 22297858 ~ 22333330 (-)
brd8a brd8,LOC104924599 other downstream 102873 21722318 ~ 21741824 (-)
G167416 NA other downstream 260515 21574218 ~ 21584182 (-)
snrnp35 snrnp35,LOC102792111 other downstream 754250 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 892163 20944001 ~ 20952534 (-)
G166843 NA other downstream 2044764 19746178 ~ 19799933 (-)
G167589 prdx4,LOC101470355 other upstream 133215 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 354316 22218060 ~ 22250378 (-)
chrdl2 chrdl2,LOC102798861 other upstream 576567 22440311 ~ 22446756 (-)
mepcea mepce,LOC103353310,LOC101485584 other upstream 596787 22460531 ~ 22468616 (-)
G167902 NA other upstream 945970 22809714 ~ 22810452 (-)

Expression


Co-expression Network