G167590 (LOC103353336)


Basic Information

Item Value
gene id G167590
gene name LOC103353336
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21986619 ~ 21987487 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227185
GCCCTTTGCAATACCTCCTCTTCTGcCGGTGAGCTCAGCCATGATCTCCTTCACAGTCCCTCCTCTGGTGTAAGTGTAGCCGTGGGCACGGTACGCAGTGATCAGGTGGTCTGTCAAATTAATTCCCGCTTCGATTCCAACTGCACAGGCCTCCTGGCCGTCATACAAGTGGCAGAATCCTCTGATGATCTTCTGCTTATACAGCTGATCTGCTTTCAGCTCCATACGCCTTATGGTCTGCATGGTGCGGTAGTACTGCAGGCCCTCCTCACGAGTCATAACCACCTGAGTAGCCGGGGCCTCGTCCAGCTTGTGGATGTCACATTTCTTTATTTCAAAGGTAGCCTCGGTTGTGAAGTCAGCATATGTGCGTGCTGACACGACTG

Function

NR:

description
PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227185 True 386 lncRNA 0.53 4 21986619 21987487

Neighbor

gene id symbol gene type direction distance location
map7d2a NA coding downstream 1809 21971955 ~ 21984810 (-)
si:ch211-114c12.2 LOC103353337,LOC104965987 coding downstream 15456 21956278 ~ 21971163 (-)
si:dkey-71d15.2 LOC103353339 coding downstream 31534 21952083 ~ 21955085 (-)
LOC120544344 NA coding downstream 44330 21937519 ~ 21942289 (-)
LOC120544506 LOC103353342,LOC102194250,LOC102779483,LOC101466084 coding downstream 58191 21921207 ~ 21928428 (-)
zgc:153704 LOC104935632,LOC104965992,LOC103353333 coding upstream 28519 22016006 ~ 22017768 (-)
LOC120543538 LOC103353331,LOC100691809 coding upstream 33469 22020956 ~ 22028017 (-)
LOC120544462 LOC103141584,LOC106952452,LOC103353330,LOC102233759,LOC101165416,LOC107104603,LOC108236878,LOC106526133 coding upstream 42807 22030294 ~ 22036597 (-)
LOC120544600 wasf3,LOC103353329,LOC102197960,LOC102297875,LOC100692077 coding upstream 49388 22036875 ~ 22043282 (-)
arhgap31 arhgap31 coding upstream 103214 22090701 ~ 22102580 (-)
G167580 NA non-coding downstream 48679 21937693 ~ 21937940 (-)
G167515 sms non-coding downstream 141936 21844151 ~ 21844683 (-)
G167498 NA non-coding downstream 192080 21792110 ~ 21794539 (-)
G167461 NA non-coding downstream 273185 21659345 ~ 21713434 (-)
LOC120543579 NA non-coding downstream 338634 21644687 ~ 21647985 (-)
G167591 NA non-coding upstream 3459 21990946 ~ 21994466 (-)
G167579 LOC101469595,LOC102299651 non-coding upstream 25212 22012699 ~ 22015678 (-)
G167678 NA non-coding upstream 310371 22297858 ~ 22333330 (-)
G167690 LOC106603099,LOC105009281 non-coding upstream 388770 22376257 ~ 22376520 (-)
G167691 ephb4,LOC104941839,LOC102775650 non-coding upstream 389128 22376615 ~ 22377167 (-)
LOC120543962 LOC103368266 other downstream 122875 21844697 ~ 21863744 (-)
brd8a brd8,LOC104924599 other downstream 244795 21722318 ~ 21741824 (-)
G167416 NA other downstream 402437 21574218 ~ 21584182 (-)
snrnp35 snrnp35,LOC102792111 other downstream 896172 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 1034085 20944001 ~ 20952534 (-)
G167589 prdx4,LOC101470355 other upstream 9472 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 230573 22218060 ~ 22250378 (-)
chrdl2 chrdl2,LOC102798861 other upstream 452824 22440311 ~ 22446756 (-)
mepcea mepce,LOC103353310,LOC101485584 other upstream 473044 22460531 ~ 22468616 (-)
G167902 NA other upstream 822227 22809714 ~ 22810452 (-)

Expression


Co-expression Network