G167589 (prdx4,LOC101470355)


Basic Information

Item Value
gene id G167589
gene name prdx4,LOC101470355
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21996959 ~ 21998648 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227181
gtcatacctgcccagggactacaggtggaaattagcaattgttgctataacctggcccaagacatattctcttgtttaacaagtttaatgtttatttgtgcattgtccctgtttcaaataaatcaatttccattccattttatgaaaacacattttatttggaTTTTCAGTAAGTGCAGGATGTCACAGACTGGGACAACAGATCAGTTGAGTTTATCAAAATACTTCAGCTTGCCTGAAGGGTCCGGAATGATTGTGTCACTGCCTGGCTTCCATCCTGCTGGACACACTTCTCCGTGTTTGTCAGTGTACTGGAAGGCCTGCACAAGCCGCAGAGTCTCATCCACAGATCTTCCCACCGGAAGATCGTTCATGGTGATCTGCCTCAGGATGCCTTTGTCATCAATGATGAAGAGTCCTCTTAGTGTGTGTCCCTGGTCCTCCAGGTAGACTCCGTAGTCTTTTGAAATCTGGTGAGTGAGGTCAGACAACAGAGGAATTTTCATTTGTCCAAGTCCACCCTGCTTCCTGGGCGTATTGATCCTGCCAGGTGGGTAAACTGGGAGTCGACAGAACAAGCGACCAATTCTGTATTGATGGCTTGAAACTCATGCACACGATCGCTGAATGCAATGATCTCAGTGGGGCAGACAAATGTG

Function

symbol description
prdx4 Predicted to enable thioredoxin peroxidase activity. Predicted to be involved in cell redox homeostasis; hydrogen peroxide catabolic process; and response to oxidative stress. Predicted to be active in cytosol and endoplasmic reticulum. Is expressed in several structures, including alar plate midbrain region; digestive system; hatching gland; optic tectum; and polster. Orthologous to human PRDX4 (peroxiredoxin 4).

NR:

description
PREDICTED: peroxiredoxin-4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227181 True 659 TUCP 0.45 5 21996959 21998648

Neighbor

gene id symbol gene type direction distance location
map7d2a NA coding downstream 12149 21971955 ~ 21984810 (-)
si:ch211-114c12.2 LOC103353337,LOC104965987 coding downstream 25796 21956278 ~ 21971163 (-)
si:dkey-71d15.2 LOC103353339 coding downstream 41874 21952083 ~ 21955085 (-)
LOC120544344 NA coding downstream 54670 21937519 ~ 21942289 (-)
LOC120544506 LOC103353342,LOC102194250,LOC102779483,LOC101466084 coding downstream 68531 21921207 ~ 21928428 (-)
zgc:153704 LOC104935632,LOC104965992,LOC103353333 coding upstream 17358 22016006 ~ 22017768 (-)
LOC120543538 LOC103353331,LOC100691809 coding upstream 22308 22020956 ~ 22028017 (-)
LOC120544462 LOC103141584,LOC106952452,LOC103353330,LOC102233759,LOC101165416,LOC107104603,LOC108236878,LOC106526133 coding upstream 31646 22030294 ~ 22036597 (-)
LOC120544600 wasf3,LOC103353329,LOC102197960,LOC102297875,LOC100692077 coding upstream 38227 22036875 ~ 22043282 (-)
arhgap31 arhgap31 coding upstream 92053 22090701 ~ 22102580 (-)
G167591 NA non-coding downstream 2493 21990946 ~ 21994466 (-)
G167590 LOC103353336 non-coding downstream 9472 21986619 ~ 21987487 (-)
G167580 NA non-coding downstream 59019 21937693 ~ 21937940 (-)
G167515 sms non-coding downstream 152276 21844151 ~ 21844683 (-)
G167498 NA non-coding downstream 202420 21792110 ~ 21794539 (-)
G167579 LOC101469595,LOC102299651 non-coding upstream 14051 22012699 ~ 22015678 (-)
G167678 NA non-coding upstream 299210 22297858 ~ 22333330 (-)
G167690 LOC106603099,LOC105009281 non-coding upstream 377609 22376257 ~ 22376520 (-)
G167691 ephb4,LOC104941839,LOC102775650 non-coding upstream 377967 22376615 ~ 22377167 (-)
G167692 NA non-coding upstream 378570 22377218 ~ 22377446 (-)
LOC120543962 LOC103368266 other downstream 133215 21844697 ~ 21863744 (-)
brd8a brd8,LOC104924599 other downstream 255135 21722318 ~ 21741824 (-)
G167416 NA other downstream 412777 21574218 ~ 21584182 (-)
snrnp35 snrnp35,LOC102792111 other downstream 906512 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 1044425 20944001 ~ 20952534 (-)
zbtb20 zbtb20 other upstream 219412 22218060 ~ 22250378 (-)
chrdl2 chrdl2,LOC102798861 other upstream 441663 22440311 ~ 22446756 (-)
mepcea mepce,LOC103353310,LOC101485584 other upstream 461883 22460531 ~ 22468616 (-)
G167902 NA other upstream 811066 22809714 ~ 22810452 (-)
zmp:0000001168 sipa1 other upstream 881068 22879716 ~ 22912915 (-)

Expression


Co-expression Network