G167580


Basic Information

Item Value
gene id G167580
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21937693 ~ 21937940 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227149
ctcttaaagCTGCCTCCACATATGTACAATGAGCTCATCATGATTTGATCATCTTTGTTGGTCTTGCAGACTATTGGTCATTAATCTGGTACATAATATGTCCAAAGAGgctattcattaaaatgaacaaataaaaaggaaataatttaTTACTGTTTTATTCAAGTGCAATATATCATAATGTATATAATGTTTCTTCACTGAAAAGGAAACATAAAAGATTATAGAACATTAAAGTATACTTGGAT

Function

GO:

id name namespace
GO:0052548 regulation of endopeptidase activity biological_process
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU227149 True 248 lncRNA 0.29 1 21937693 21937940

Neighbor

gene id symbol gene type direction distance location
LOC120544506 LOC103353342,LOC102194250,LOC102779483,LOC101466084 coding downstream 9265 21921207 ~ 21928428 (-)
LOC120544412 LOC104924591,LOC104966489,LOC103368267 coding downstream 18312 21915529 ~ 21919381 (-)
si:ch211-244c8.4 NA coding downstream 25688 21907474 ~ 21912005 (-)
gabrr3a gabrr3,LOC103368263,LOC101072487 coding downstream 61314 21867454 ~ 21876379 (-)
nfrkb nfrkb coding downstream 173035 21753406 ~ 21764658 (-)
si:dkey-71d15.2 LOC103353339 coding upstream 14143 21952083 ~ 21955085 (-)
si:ch211-114c12.2 LOC103353337,LOC104965987 coding upstream 18338 21956278 ~ 21971163 (-)
map7d2a NA coding upstream 34015 21971955 ~ 21984810 (-)
zgc:153704 LOC104935632,LOC104965992,LOC103353333 coding upstream 78066 22016006 ~ 22017768 (-)
LOC120543538 LOC103353331,LOC100691809 coding upstream 83016 22020956 ~ 22028017 (-)
G167515 sms non-coding downstream 93010 21844151 ~ 21844683 (-)
G167498 NA non-coding downstream 143154 21792110 ~ 21794539 (-)
G167461 NA non-coding downstream 224259 21659345 ~ 21713434 (-)
LOC120543579 NA non-coding downstream 289708 21644687 ~ 21647985 (-)
G167420 NA non-coding downstream 328928 21587878 ~ 21608765 (-)
G167590 LOC103353336 non-coding upstream 48679 21986619 ~ 21987487 (-)
G167591 NA non-coding upstream 53006 21990946 ~ 21994466 (-)
G167579 LOC101469595,LOC102299651 non-coding upstream 74759 22012699 ~ 22015678 (-)
G167678 NA non-coding upstream 359918 22297858 ~ 22333330 (-)
G167690 LOC106603099,LOC105009281 non-coding upstream 438317 22376257 ~ 22376520 (-)
LOC120543962 LOC103368266 other downstream 73949 21844697 ~ 21863744 (-)
brd8a brd8,LOC104924599 other downstream 195869 21722318 ~ 21741824 (-)
G167416 NA other downstream 353511 21574218 ~ 21584182 (-)
snrnp35 snrnp35,LOC102792111 other downstream 847246 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 985159 20944001 ~ 20952534 (-)
G167589 prdx4,LOC101470355 other upstream 59019 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 280120 22218060 ~ 22250378 (-)
chrdl2 chrdl2,LOC102798861 other upstream 502371 22440311 ~ 22446756 (-)
mepcea mepce,LOC103353310,LOC101485584 other upstream 522591 22460531 ~ 22468616 (-)
G167902 NA other upstream 871774 22809714 ~ 22810452 (-)

Expression


Co-expression Network