mepcea (mepce,LOC103353310,LOC101485584)


Basic Information

Item Value
gene id mepcea
gene name mepce,LOC103353310,LOC101485584
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22460531 ~ 22468616 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227352
atctgtaccaaacaaagatttttttttttctttatttttttttttttggtgtgttttcaaatgttctCTGCCAATTTGTGAGTGAGTCAGAGTTTTTGTCCTAAAACAAACTGCTAATCCAGCTCTGTAACAACAAATGAATATGTACATTGCAATGTTCTGATGTGTTTGCTTTGTTCTGTCCTGGCAGGCACATGGATTGTTAGATTggctctttatttttttataaaccaTTTGAAAGGATTGTTGTTAATGCACT
>TU227366
CAGTTTGGAGCCCGGATGCGCCGCCATGCCGACTCTATCAGCGAATGGAATAATTTATTCACCAACCTGCCTGCCACTGGGCGACTAGAGTTCACTGAAGAAGTCGACAAGACAGTTTGGAGGGCAGAGGAGCCCCTAACTGCGGGATGACTAGTACGGGATACCCGCGCTGTGTTTACTTGTTTTTTTGCGTTGCTTGCCACCGTTGTATTGATGTAGCTAGGAACACTTGAGTGCTAgctacgctaacgttagctcgagTCGAGAGAGTGCGCGGTAGTGACAGTCCGGCCGGAGGCGGGGAGAACTGTGAGGTGATACTGTTAGTTTGATGGTGACTACACTAAACTGTTGACTGTATGCGTAGAGATAGGCATCTGGTAGATAGTATCACTTTTATCAATCACGATTTTAGGGGGGTTCAGGCAGCAGCACATCGAGCTGGGTAGTTGACTGTTTGTCTAGTATCGGCTTTTTGGCCGGAGTGGAGCTGAACGTTTAGTCGACGTTTCAGTCTTCTGGCCCGCAATAGAGAAGCTAagagctagcttgctaactagATAACTGTCCAACACAGGGAGGACTCCTAAACTTTTCAGATCCAGAATAATTTCCATGTCTGCATCAGTCCTGACAACCAGAAGTGATGTCTGTTGATGAGGATACTGTAAAAACTGGCAGTCCACAGGCCAGCTCAACTTCATCTCTGCAGCTATCAGAATGTACTGGAGGATACAGCAATATAACTGTGATGGTGGAGGGTACTGCTGCCACCCCTGATTTTGCAGCTGCTTGTCCTGTCTCAGGCCCTGAAGCCTCTCCAAAACACATCAGCGCGACTGATGCGCTTACCCATTCAGATGATGCTGGACAGGGAGCCAGAGGGAACGAGAATAACATCAATCGCAGGAACAGCTTTCATCATtccaaacaacagcaacaaacaaaactaacaaaGCGCCGCTACACAGCAACCGCTAGTTTCAAGCATCCGACATCTGGCAAGAGGAGACGAAGGGCCAACTCTGAGAGTGACTCCGTCCTGCCTACCAACTTCCTCCTGGGTGGGAACATTTTTGACCCACTGAATCTCAACAGCCTGTTGGATGAGGAGGTCAACAGGGCACTCAATGCAGAGACGCCCAAATCCTCCCCGCTGCCAGCGAAGAGTCGGGACCCTGTGGAAATCCTCATTCCCAGAGATATCACAGATCCACTGAACCTGAACAGCGGGATAGCAGGCAGCAGCTTTTTGGTGTCCCCCTTCAAAAGTGGTGGCAGGAAGAGACACCGCAACAGACaccatggaggag
>TU227367
CAGTTTGGAGCCCGGATGCGCCGCCATGCCGACTCTATCAGCGAATGGAATAATTTATTCACCAACCTGCCTGCCACTGGGCGACTAGAGTTCACTGAAGAAGTCGACAAGACAGTTTGGAGGGCAGAGGAGCCCCTAACTGCGGGATGACTAATCCAGAATAATTTCCATGTCTGCATCAGTCCTGACAACCAGAAGTGATGTCTGTTGATGAGGATACTGTAAAAACTGGCAGTCCACAGGCCAGCTCAACTTCATCTCTGCAGCTATCAGAATGTACTGGAGGATACAGCAATATAACTGTGATGGTGGAGGGTACTGCTGCCACCCCTGATTTTGCAGCTGCTTGTCCTGTCTCAGGCCCTGAAGCCTCTCCAAAACACATCAGCGCGACTGATGCGCTTACCCATTCAGATGATGCTGGACAGGGAGCCAGAGGGAACGAGAATAACATCAATCGCAGGAACAGCTTTCATCATtccaaacaacagcaacaaacaaaactaacaaaGCGCCGCTACACAGCAACCGCTAGTTTCAAGCATCCGACATCTGGCAAGAGGAGACGAAGGGCCAACTCTGAGAGTGACTCCGTCCTGCCTACCAACTTCCTCCTGGGTGGGAACATTTTTGACCCACTGAATCTCAACAGCCTGTTGGATGAGGAGGTCAACAGGGCACTCAATGCAGAGACGCCCAAATCCTCCCCGCTGCCAGCGAAGAGTCGGGACCCTGTGGAAATCCTCATTCCCAGAGATATCACAGATCCACTGAACCTGAACAGCGGGATAGCAGGCAGCAGCTTTTTGGTGTCCCCCTTCAAAAGTGGTGGCAGGAAGAGACACCGCAACAGACaccatggaggag
>TU227368
CAGTTTGGAGCCCGGATGCGCCGCCATGCCGACTCTATCAGCGAATGGAATAATTTATTCACCAACCTGCCTGCCACTGGGCGACTAGAGTTCACTGAAGAAGTCGACAAGACAGTTTGGAGGGCAGAGGAGCCCCTAACTGCGGGATGACTAGTACGGGATACCCGCGCTGTGTTTACTTGTTTTTTTGCGTTGCTTGCCACCGTTGTATTGATGTAGCTAGGAACACTTGAGTGCTAgctacgctaacgttagctcgagTCGAGAGAGTGCGCGGTAGTGACAGTCCGGCCGGAGGCGGGGAGAACTGTGAGATCCAGAATAATTTCCATGTCTGCATCAGTCCTGACAACCAGAAGTGATGTCTGTTGATGAGGATACTGTAAAAACTGGCAGTCCACAGGCCAGCTCAACTTCATCTCTGCAGCTATCAGAATGTACTGGAGGATACAGCAATATAACTGTGATGGTGGAGGGTACTGCTGCCACCCCTGATTTTGCAGCTGCTTGTCCTGTCTCAGGCCCTGAAGCCTCTCCAAAACACATCAGCGCGACTGATGCGCTTACCCATTCAGATGATGCTGGACAGGGAGCCAGAGGGAACGAGAATAACATCAATCGCAGGAACAGCTTTCATCATtccaaacaacagcaacaaacaaaactaacaaaGCGCCGCTACACAGCAACCGCTAGTTTCAAGCATCCGACATCTGGCAAGAGGAGACGAAGGGCCAACTCTGAGAGTGACTCCGTCCTGCCTACCAACTTCCTCCTGGGTGGGAACATTTTTGACCCACTGAATCTCAACAGCCTGTTGGATGAGGAGGTCAACAGGGCACTCAATGCAGAGACGCCCAAATCCTCCCCGCTGCCAGCGAAGAGTCGGGACCCTGTGGAAATCCTCATTCCCAGAGATATCACAGATCCACTGAACCTGAACAGCGGGATAGCAGGCAGCAGCTTTTTGGTGTCCCCCTTCAAAAGTGGTGGCAGGAAGAGACACCGCAACAGACaccatggaggag
>XM_039776926.1
ATTTCCGCCCCTGTCATCTTGGACAGTTTGGAGCCCGGATGCGCCGCCATGCCGACTCTATCAGCGAATGGAATAATTTATTCACCAACCTGCCTGCCACTGGGCGACTAGAGTTCACTGAAGAAGTCGACAAGACAGTTTGGAGGGCAGAGGAGCCCCTAACTGCGGGATGACTAGTACGGGATACCCGCGCTGTGTTTACTTGTTTTTTTGCGTTGCTTGCCACCGTTGTATTGATGTAGCTAGGAACACTTGAGTGCTAgctacgctaacgttagctcgagTCGAGAGAGTGCGCGGTAGTGACAGTCCGGCCGGAGGCGGGGAGAACTGTGAGGTGATACTGTTAGTTTGATGGTGACTACACTAAACTGTTGACTGTATGCGTAGAGATAGGCATCTGGTAGATAGTATCACTTTTATCAATCACGATTTTAGGGGGGTTCAGGCAGCAGCACATCGAGCTGGGTAGTTGACTGTTTGTCTAGTATCGGCTTTTTGGCCGGAGTGGAGCTGAACGTTTAGTCGACGTTTCAGTCTTCTGGCCCGCAATAGAGAAGCTAagagctagcttgctaactagATAACTGTCCAACACAGGGAGGACTCCTAAACTTTTCAGATCCAGAATAATTTCCATGTCTGCATCAGTCCTGACAACCAGAAGTGATGTCTGTTGATGAGGATACTGTAAAAACTGGCAGTCCACAGGCCAGCTCAACTTCATCTCTGCAGCTATCAGAATGTACTGGAGGATACAGCAATATAACTGTGATGGTGGAGGGTACTGCTGCCACCCCTGATTTTGCAGCTGCTTGTCCTGTCTCAGGCCCTGAAGCCTCTCCAAAACACATCAGCGCGACTGATGCGCTTACCCATTCAGATGATGCTGGACAGGGAGCCAGAGGGAACGAGAATAACATCAATCGCAGGAACAGCTTTCATCATtccaaacaacagcaacaaacaaaactaacaaaGCGCCGCTACACAGCAACCGCTAGTTTCAAGCATCCGACATCTGGCAAGAGGAGACGAAGGGCCAACTCTGAGAGTGACTCCGTCCTGCCTACCAACTTCCTCCTGGGTGGGAACATTTTTGACCCACTGAATCTCAACAGCCTGTTGGATGAGGAGGTCAACAGGGCACTCAATGCAGAGACGCCCAAATCCTCCCCGCTGCCAGCGAAGAGTCGGGACCCTGTGGAAATCCTCATTCCCAGAGATATCACAGATCCACTGAACCTGAACAGCGGGATAGCAGGCAGCAGCTTTTTGGTGTCCCCCTTCAAAAGTGGTGGCAGGAAGAGACACCGCAACAGACaccatggaggaggaggaggtggggctggaggaggaggtggggctggaggaggaagtggggctggaggaggaggaggaggaggaggaggaggaggaggaggaggaggtgggattTCAACCACACAGATCAACCTCTCAGAATCAGGAAAAAGTGAGGTTAAAACTGGCACCTCCACACTGCTTCCAGGTATGTTAGCTTCATGTTCTGCACTAGATGTCTCCAAAGAGTCCAACAGTTTCTCCAGTGTCGCAGGGGATTCCCATGAGCACTCAGCTGACAATTCAGCCAGCTGCAAGGAGGAGATGACATCTGTTTCTATCGAGGATTCCACTTCCTCCACATCGGGGGCACCAAACCAGCACACAAGCAGACGCAAGCGTAGGCGCAACTCTGGCAAAATGGAAGCCCCTGTGACCCATTCTACGCCAATTGGAAAGTCAGTATCTGTAGACAGGAGTTGTGGTACATCAAGAAATTCCCAGTCCTTCCACACACCAAGGAGTGGTCCCAAAACAGGGCCAGGAGGTCGACAGCACCAGCAGCCCCACACCCAGGCGAAGGAGCAACAGAAGAAGTTCCAGTATGGGAACTACAACAAGTATTATGGCTACCGCAACCCAGGCGCTAGTGAAGACGCACGGGTACGTGTGCTTCGTCCCGAATGGTTTGAAGGTAAAGACGTTCTGGATTTGGGGTGCAACTCAGGCCACCTAACACTCTATATTGCCAAAATGCTAAGACCTGCCCGCATATTGGGCCTGGATATTGACAGTGGTCTGGTACATGCAGCTCGTAAGAACATCAGACATTATCTGTCTGAACTGCAGACCCAAGAGGCTAGGCATGCGATGCAGGAGAAAAAGAGCACTAAGCAGGCAAGGAATGGAAATGAGAGTCTCACAGGCACAGACAAGAAGCACAATGAAGCCGAGAGCAGGGATGAAAACGGTAAACCTGTGAAAGGAGAAAGTGGCCCTGCAGAGGCTGCAAATGACAATGACTCCTGTCACACAGATGAGGCGGGGACCCAGAGACAGAGCGACAAAACAGAGGAAATGGAGCAGGAAGCGTGTGATTCACCCCCTGTTGATCACTCTGTGAGCTGCTCTTTTCCCGTGTCCCTACGGATCTCCAGGGGGCCCATTGCTGCACCTCCACTAACAGAAACATCCACCACACGGCCCGGAGAGTTCCCCTCAAATGTGTCCTTCATCAAGGCCAATTATGTACTGGAGAACGATAATCTTCTTTTGACTCAGCGTCCAGAGTACGACGTGATCCTGTGCCTGAGCGTTACCAAATGGGTTCACCTGAACTGGGGAGACAGTGGCCTCATGCGGCTCTTCAAGAGAGTCTACAAACATCTCCGTCCTGGAGGCATGTTCATTCTGGAGCCACAGCCCTGGGAGTCCTATGTGAGGAGGAAGAAGCTGACGGATAATATTAGCAGGAACTTTCACAGCATCCGCCTCAAACCTGACCAGTTTTCATCGTACCTTACAACAGAGGTGGGCTTCACAAGTTCGGAGTACCTTGGGGCCCCAAAGTGTTCAATAAGAGgTTTTCAGAGGCCAATCTACTTATTTCACAAATGACCGCTCCTGCCTTGAAGATCACTGAATGTGAGTAGCCTAAGCCACCACCATACATAGAAGCCAGCCAGCTGCCCTGGACTGCAAGGAATCATCTTTGTCCTTAACAGTTACTCCAGCTTTTCAGATGCTGAAGATGAAATTCAGAAATGAGAATCGGACCAAAGTGGAATCAATTTCGTAAAGATGAGATGTGTCGAGAAGAGGTATCTATCAGAATCCTCTGTGACTACAAATTCTTAAAGAGTATGGAGTGAACTTGGATCAGACTCCACAGTGTTTAACCTGGACATCATAGCTGGGCCAGACTGTAGAAGAGGTGCTTAGCTGATTCTTTCCTTGGACCATCCTAGTGCTAATGATGCTCCAGTTTGATGCAAGGCCATAACGTGTTTGAAAATCTTTGGCCATATATCTTTACTTTCAAAACTTTGTTTTCATAACTGTTCTGTGCCACCGCATCAACATAAAGTTTACATATTAGGGTTGGGCAATAGGGCAGACTTTTTCCAATTGGCCAGCATATCCACGTTAAGTGGTGATTGATGGTGTGTTCACTACATTAGCTCCATGTGACCAACTGTGTGTCGCACTTGCAAAACAGCAGTACACCACTGGATTCCAAAGCCATTACACGGATCATACTGATCATGATGTCTTTTAAAAAGCCACACTGGAGTGCAGGTGATGTGCTTTATGCTGTGTAGGACACTATGCAGGTTATGAATGAAGCCTCATATTGCCAGCTCCATTACAATTACTGATGACATAGAAATTGTGCTCTTTGTGGTTACATATCTGCATCATTTTTGAAGCCTTGAATCCCGTTGTGGTGGACGTATAAACGCAAATATTTTGGTGAATTTGAAACAGCCAAACAAATTACATCAGCCATAGATTGTGTATAGCTGATATATCTGTCCCATTTTCCAACCCTAATATatagtttgttttgtcatttttttttgcaaaatagGCCTTAGAGCTGATTTAACTTTAATATGTTACAGAGCTGTGAAAATGTTGTAAGTCCACATTTTGCCATGGACAGTATGAAAAGCTCCTAAATTGCACAAACCTAAGACGCTATGAAGTGAAAAGTGGCTTGTCTGAGTGATAAAGACAATAATGCACGATGAGAAAGGTGCACTGAAAACAgccaaaaacatacaaaacagaaCAGCCATCCAGTAAACTGCCTAAACTAAACTACAACTAGTGAAAGCTTACCCAGTGCCCAGCCAGCATGTTTTCAAGgtctcttgtcttttttttttttttttcttttaacagtcAGTTCCTTAAAAACTGTCATGATGAATGTCATCAAATATTAGATCGGTTGTTATGACATGGGAAAGTACATAGTTTACTCAGGCCTACTAGCACTGGGAAGAGTACTTTATATGGTACCTCAAACCTGACCTCAGCTAAAatggaaaaaatggaaaaatcaGATATCTACATTTTCAAGAAAACAGTTTTGGCTTTTTGAATGTAAACCTTCAGGCCTGTGTAATTTTACTTGAGAGTTTGGACTGTTTAGGAAGCAACAAATCACTTCTTGGGTTTTTTAAGCCTTTTCAATGCTCCATCCTAATGGTAGGGGGCACATTTAAGCTGTGCTGACACCCAGGTGTTGGCTCAGCTCAATAATTTAGCACAGAAACCACAAGGACTGTTTAGTAAGGTAAATCTGTAGCATGCAGTGatcaaatgtatattttttaatgacaGTTAAGCCATAGCCCTACCTTTTTATATGTTGTTTACAATGTCTACAATGAGGCAGAGGGCTGTCATTAGAGAGTTGCTACAGCGTCTTCAGTGATGTATAAATCCGAAACATGCATTGTTTTGTGTGGTCTGATCTTCACCACTGGACAGGCATTAATTCAAACAGCATCAGAATCACTTTCGAGCTCCTGAGTTGAAATCAACTTCTGTAAGACGGAACAAAAATTTACATTTGTAGAAAATGGATTGTTAGTAAAATTTCCATATGACTTTTTACCATTTGAAATATTAATAGGCTGTTTGTATTGAAGCTCTGCCGAACTATTTTATGGGTAGTTAGTCTTTGTGACTATATCTTTACTGGTGTGCGCACTGAGCATCGCTCATCTACAACCTTTCATTGTAAGTGGCTGGGACTAAAAAGCTTCCTTTTTTGTGACTGGTTCAATTACAGCATTTGGCATACTAGAGTAGGAGATGATGGAGAAGGATGGATGATAGTTTTCTATTTTAGTAAGTGATCAATGTAAATAAGTTTGCAAATTTTGTTTTACTGTTGTCAATATTAAGTTCATAACTGCTTTTGtcattttccagtttttttttttttggtgtgttttcaaatgttctCTGCCAATTTGTGAGTGAGTCAGAGTTTTTGTCCTAAAACAAACTGCTAATCCAGCTCTGTAACAACAAATGAATATGTACATTGCAATGTTCTGATGTGTTTGCTTTGTTCTGTCCTGGCAGGCACATGGATTGTTAGATTggctctttatttttttataaaccaTTTGAAAGGA

Function

symbol description
mepce Enables 7SK snRNA binding activity and RNA 5'-methyltransferase activity. Involved in RNA modification; positive regulation of protein localization to Cajal body; and positive regulation of snRNA transcription by RNA polymerase II. Located in nucleus. Part of 7SK snRNP.

NR:

description
PREDICTED: 7SK snRNA methylphosphate capping enzyme-like isoform X1

GO: NA

KEGG:

id description
K15190 MEPCE, BCDIN3; 7SK snRNA methylphosphate capping enzyme

RNA

RNA id representative length rna type GC content exon number start site end site
TU227352 False 259 lncRNA 0.32 2 22460531 22464955
TU227366 False 1313 TUCP 0.51 2 22466583 22468593
TU227367 False 867 TUCP 0.52 2 22466583 22468593
TU227368 False 1028 TUCP 0.52 2 22466583 22468593
XM_039776926.1 True 5459 mRNA 0.45 6 22460547 22468616

Neighbor

gene id symbol gene type direction distance location
spag7 spag7 coding downstream 8354 22447538 ~ 22452177 (-)
neu3.1 neu3,neu3a,LOC104941831,LOC101487017,LOC102203440 coding downstream 33514 22423974 ~ 22427017 (-)
LOC120544203 gfra3,LOC103353320,LOC102777392 coding downstream 251124 22186719 ~ 22209407 (-)
cdc23 cdc23,LOC102777673 coding downstream 310436 22143765 ~ 22150095 (-)
casr casr coding downstream 334492 22119682 ~ 22126039 (-)
LOC120543725 capn6,capn5 coding upstream 43745 22512361 ~ 22523557 (-)
LOC120544449 dcx coding upstream 60470 22529086 ~ 22556944 (-)
il13ra2 NA coding upstream 111701 22580317 ~ 22587639 (-)
lrch2 lrch2 coding upstream 126210 22594826 ~ 22629441 (-)
wdr44 wdr44 coding upstream 176469 22645085 ~ 22657563 (-)
G167697 NA non-coding downstream 77726 22379820 ~ 22382805 (-)
G167696 NA non-coding downstream 80755 22379547 ~ 22379776 (-)
G167695 NA non-coding downstream 81126 22378787 ~ 22379405 (-)
G167694 NA non-coding downstream 82012 22378197 ~ 22378519 (-)
G167693 NA non-coding downstream 82597 22377666 ~ 22377934 (-)
G167786 NA non-coding upstream 174766 22643382 ~ 22731145 (-)
G167801 klhl13,LOC104946894,LOC102794736,LOC106603113 non-coding upstream 223011 22691627 ~ 22699970 (-)
G167816 NA non-coding upstream 290584 22759200 ~ 22760547 (-)
G167903 LOC103353295 non-coding upstream 342973 22811589 ~ 22814577 (-)
G167905 NA non-coding upstream 352855 22821471 ~ 22821727 (-)
chrdl2 chrdl2,LOC102798861 other downstream 13775 22440311 ~ 22446756 (-)
zbtb20 zbtb20 other downstream 210153 22218060 ~ 22250378 (-)
G167589 prdx4,LOC101470355 other downstream 461883 21996959 ~ 21998648 (-)
LOC120543962 LOC103368266 other downstream 596787 21844697 ~ 21863744 (-)
brd8a brd8,LOC104924599 other downstream 718707 21722318 ~ 21741824 (-)
G167902 NA other upstream 341098 22809714 ~ 22810452 (-)
zmp:0000001168 sipa1 other upstream 411100 22879716 ~ 22912915 (-)
si:ch211-117m20.4 LOC104950135,LOC102215356,LOC102305874,LOC101475389 other upstream 480891 22949507 ~ 22951736 (-)
LOC120543557 NA other upstream 682228 23150844 ~ 23153409 (-)
slc12a9 slc12a9,LOC103370084 other upstream 958172 23426788 ~ 23437928 (-)

Expression


Co-expression Network