slc12a9 (slc12a9,LOC103370084)


Basic Information

Item Value
gene id slc12a9
gene name slc12a9,LOC103370084
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23426788 ~ 23437928 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227916
TCATTGTTTTGAAGTATCTGGAGTTACAACCTTTCTCTATTCTTGTTAGGGAATTTGCTTTCTGTGAATTTCCGACTTTACCTTACGTCTCTGTTAGAGGCTTATAAGGGTTATGTTCTATTCTTGCTTTCTACCCCTCACATAACTATGTCTTATGTTACACGGTTTCCCAATTCTAGTTGAGTTGAGTGCATTATTATCTACTCATTCATTTATGACCGACATTTATTTCTAGAGAAATCTTTTGAcaagttgttttgttttggtaaCGGGTTGAAATCATATGTTGGTTCACTTTGTAAGATGATgatttttgtatattattaaaTTTCCTCCAGCTTGTGTACACATA
>TU227917
AACTTCAGCATGCAGATGCAGGCAAGACTACTCTTCCTTTTCCCCAAGCTTCTCCTTTTCCTTGCACACTCTTATATAATATTTGCTGTCTTCTGCGACATTTCGTAGCTTTCTTATGAGGAATGGTGACATACGAAACCAGTCCGGCAGGAGTATTGCAAGAGCCATGCCCTGTAGGATGATAGGAAAGAGAAGATGAGACATTAATATATCATAGCAGCTGACAGTTTGTAAGTGATCACAGTCTCTCATCTCTCTGACCTGGAGAGCGTGAGACAGACAGCCGCTGGTGTAGCTGGAGTGACCCACAGTGTTCAAGGCCTCACTCGCGAACCTGGAAGCACTCTTCGCAAAGCGGTTGCCACTCACGTTTTTCGTCATGTTGGTGGACACCATGAAGGGGGCCACACACTGGGGGGGAGAAAATGACTGGTTGGACTAGTTAAACTTCCCTTTATATCATACACATATTGCTGACTTTTAAAAGTGATTTTCAGTTTTAGCA
>XM_039777792.1
CCTCCCCTTTTGGCAGTCACATGGGCGGTTTCTGCTCTCCCGTGACACTTTTGAACAAATAATAGGAGAACGAGGCGTGCCATTGCTGCTGTGTTGTTATTGGGCAGCACATCTTTCACAGCATCAACTCTGTGGACAGCTCAGTTCTGCCTGTCCGGCCTGCAGCGGTTACATTTGACCGTCCACTGCGCATCTGACCCGGTAGGCTACATCTTCCACCAGAAACAAACCGCTGAgacaagcagagagagagagagaaacagactcaGTGGGCCACAAAAGAAGCAGGAAGTGCGTGAAACTGTCTCCGGAAGGTTCAGCGAGggtCAGCAGACTGATCCCAGGCTCTTCTCACCAACCATGTCAAACGAACGCACCCCTTTGATCCCCTCAGGGGTATGTTGTCTGCCTGTGTGCGGCGCGGAGTCGTCCACCACCCCTGAATCCGCCTCCGAGACACCAAGTAAAGACTCTCGAAAACTAAACACTTTTTTCGGGGTGATGGTGCCGACCATCCTCTCCATGTTCAGCATCGTGCTGTTCCTGAGAACCGGGTTTGTGGTTGGTCACGCGGGCCTGTTACAGGGTCTATTAATGGTGATTGTAGCCTACACCATTATATCTCTTACAATACTGTCCATCTGTGCCATTTCCACCAACGGTGCTATACAAGGTGGTGGAGCCTACTACATGATAAGTCGCTCTCTGGGCCCAGAGTTTGGAGGAAGCATTGGTTTGATGTTCTTCCTGGCCAAAGTATTTGCATGTGGAGAGTATGTACTTGGTCTTGTGGAGGCGATACTTGACGTGTTCGGTTCGGATCCTGAGTCATCTGTTTCCGAGGGGCTGCGGGTGCTTCCTCAGAGTTACTGGTACACAGTGCTGTACTCCTCAGTAGTCCTTCTgctgtgtctgcttgtgtgtctgGTGGGCGCTCACATCTACTCCCGCACCGCCTTCGTCATCCTGCTGGTGGTCACCGTATCCTTGCTGTCCATCTTCATCAGTTCTGTGGCAGTCAAACCTCGTGATTTTGTCATCACCCACAAGGGATCTGACAACCAAACTGTCCGCTACAACGCCAGCTACACAGGCTTCAGCGCGACCACTCTGAGGAACAACCTGGGCTCTGGTTACTCTTTGGACTACAGCACCAACTCTGTCATGTCTTTTGCCACCGTGTTTGCCGTCATGTTCACCAGCTGCACTGGGATTATGGCCGGAGCGAACATGTCAGGGGACCTGAAGACTCCGAGTGTTTCCATCCCTAAAGGCACCATCACAGCCgtcttttacacttttacagtctatgtcctcctcttcatcttgGTCAGCGCCACATGTGACAGaaaccTGTTGATTCAGGATTATGGGTTCCTCCAGAAAATAAACATCTGGTCGCCGTTCGTCACCGTTGGGATATTCTGCGCTGCTCTGTCAGCTGCAATGTGTGCTATGATTGGAGCATCCCGTATCCTCCACGCTCTTGCTCTGGATCACCTCTTTGGTTTGCCATTAGCTCCAGCTGCCATCACATCAAATTCTGGGAATCCGTGGGTGGCAGTGCTGTACACCTGGGGTCTGGCACAGtgtgtagTGTTTGCAGGCCAGCTTAATGCCGTAGCAAGTTTGGTGACTGTTTTTTACTTGCTTGCCTACGCTGCGGTTGACTTGGCCTGTTTGGCTCTAGAGTGGGCGTCGGCACCAAATTTCAGACCAACCTTCCAGCTCTTCTCCTGGCACACCTGCCTGCTGGGCATCCTGAGCTGTTTAGTGATGATGTTCGTCATTAACCCTGTGTACTCCTCAGGCAGCATCGTCCTcctgttactgctgctgcttttcCTCCATTACAGATCGCCCACCAGCAGCTGGGGCTACatcagccaggctctcattttCCATCAGGTGCGCAAGTATCTGTTGATGCTGGATGTGAGGAAAGACCATGTGAAGTTCTGGAGGCCGCAGATGTTGTTAATGGTGGCCAACCCTCGCTCCTCCTGTCAGCTCATCCTGTTCATCAACCAGCTGAAGAAGGGAGGACTGTATGTGTTGGGCCACGTGCAGCTGGGAGATCTGGACTCCCTGCCATCAGACCCGGTCCAGCAGCAGTACAACTTCTGGTTGAGCCTAGTTGATAAACTCGGGGTGAAGGCCTTTGTAGACCTgacgctgtctctctctgtcaggcaGGGAACACAGCATCTGCTGCGCATCACAGGCCTAGGTGGCATGAAGCCCAACACATTGATTTTGGGTTTCTATGACAGCTGTACTCCTGAGGACTTCTTCCTACAAGATTCTGCGTTCTGTGACTCTTCCATTGGTCGGGGGAGTGAGGGCGAATATAATTTTGGGGTTGATTTGCCTTCATTACAGGCCCATTTTCCCCCAGTCCGACATGTGGAGAGCCCACGCTGGCTATCACCAGAGGAGTACGTAGGGATAATTTCTGACGCCATTAAAATGAACAAGAACGTGTGCCTCGCCCGCTATTTCTTCCAGTTAGAGGGAGAGGGTAAAGATAGCAAGGTGGACGGGCCAGAACGGACAATAGATGTGTGGCCTCTTAACCTGCTCCAGCCAGGCAGCCGTGATTATGAGGATGTGTGCAGCCTCTTCCTGCTGCAGATGGCCTGCGTCCTCAACATGTCCAGCAAATGGCGGCATGCAAGAATGAGAATCTTCCTGAATGTGGAGACTGAGTCTAACGACCAGGGCTGGGTGGTTAACGAAGAGACGTTCCGAGAGTTGCTGAGGAAGCTGAGGATCAGGGCGTCGATAAAGATCGTTCCGTGGGACTCTGTGGTGCAGCACCACGTTCAGCCAGATGGGGAGCTCCCTGCAGAGCCAACACAAGCTCTGTCTGAGGACTTCCTGTCCGCGGTGAACAGTATGTTGATGGAGCACAGCTCGCAAGCCACTGTTCGCTTCCTGTATTTACCTCGACCCACTGGTCACCGCAGCCAGTCACAGCAGTACTTGGCTCAGGTGGAAGCAGTGACCAATAGTTTGGGGCCAACGCTTCTGATTCACGGTGTCACCTCAGTCACATACACTGATCTGTGAGCATGTGCAGTCATGGGTTTTgttcattaatattaaagttgCAGCAAAGTCTTATCTGTGTAAGTATAAACTCTTGTTACATGTAAAATGAACACATAATGTAAAGAAAAGTGGATGCTAAGGTACAGTATGTAGTAGCAGTTACTATACGTTCACCTAATGCAGCTTTAGTTGTTGTTTTACTAAAGCTTACAAAAGGACCACAGTCGAGTGCATTTTCAAAATTGGTCCCTTGAGGTTTTTGCATTCAAATAGGATATTTCCTATTTATATGTACTTGAACTGGCTTGCTGATTGAGCCAAGAAATGGGGGAATACTAACTTTTGTGGCCGTGATTTCTGTCGACATAACCTCCTGTTTGCATTAGCTTTAGGCCTGTCTTTTCACATGAGACAGAAATTAGAAATTTGTCAAAGACttctcaaaacaaaaacacattttgtttggaGCAATACGGGTTGTCTCAGACATTGAATATAaaatgtctatatatatatatatatatataatttcaggGATGGAATTATGAATTTCTTTTGCCACAACAATTGACCACAGTAAAAACTTATTTTCCTGGTTCAGTTTCTTAATAGTATTGTGTTAATACATAATAActtctgtatttttgttgcttGTTTTTACTACATTCTCACATTTCTGCTGGTTGCTGGACCAAGTCATCCAAATACTTTTTCTTTCTAAACAGATTTTTGATTCCCATGCTTTTCTGCAAACATGACTTGTGTCTGTTACATGTGCTTCTCTAGTCTTCACAAAGGGATCCGTTACATATGTTTTACCTCAGAATGATGaactgtatttgttgctattgTGCTAacctaaaaaaatatattgcgatttttgttttcaaaataacaccaaaaaGTGTTAGTGATGGTCACTTTAATCCATTCTCAGTCAGGACCAGGAACAGCAATGATTCAGACCAAGGCCAGGTTGACACCAAAGTAAGTTGTTACACAGCAATTAATTTACCCTATTTACAAAAtacagaataaaagaaagttagaATAAAGTTACTGCATTCTTctcacattttgttttatactGTGCAACACTCACCAAAACATAAATAGGAAATTGATGAAAAGTTGCACAACCTTTTGGCATGTTCTATTTTGAGTTGTGGTTCTCGGTCAGTGAGAAAGCCTGAAAGGGCTGACTCTTGTATACTAATAGTTGTTACTTGTACATATTGTCATATGTTTAAATATATGCCAAATGTACTGTGTATCTGTATCTTTGTAACTGTAATATTGTAAgatcttaacaaaaaaacatgtatttaaaaGATTTCTTAAATGCAAAGCAATACAGATTGTGTCTGTATATCTGAAGTGTAATAGTGTAAATATTAATAGAAACTCTGTTATGCTACCCTGCAAATTTGCTCcatagataaaataaaaatgtcatgcaataattgagaataaataaatgtacaaaATATATCATAATTACATATATAGTGTATAGTGTAGCTCATTTATAGTAACCTCAATACACACATTTGAGGTATCTGAGAAGTGGACCTACAGTGAAGATAATCTATTATAAAGCCCATAGTCACGTGTAAAGTAAACATTCATGCCAGTAAGAACTTCAGCATGCAGATGCAGGCAAGACTACTCTTCCTTTTCCCCAAGCTTCTCCTTTTCCTTGCACACTCTTATATAATATTTGCTGTCTTCTGCGACATTTCGTAGCTTTCTTATGAGGAATGGTGACATACGAAACCAGTCCGGCAGGAGTATTGCAAGAGCCATGCCCTGTAGGATGATAGGAAAGAGAAGATGAGACATTAATATATCATAGCAGCTGACAGTTTGTAAGTGATCACAGTCTCTCATCTCTCTGACCTGGAGAGCGTGAGACAGACAGCCGCTGGTGTAGCTGGAGTGACCCACAGTGTTCAAGGCCTCACTCGCGAACCTGGAAGCACTCTTCGCAAAGCGGTTGCCACTCACGTTTTTCGTCATGTTGGTGGACACCATGAAGGGGGCCACACACTGGGGGGGAGAAAATGACTGGTTGGACTAGTTAAACTTCCCTTTATATCATACACATATTGCTGACTTTTAAAAGTGATTTTCAGTTTTAGCACTGAGACTGACAAACACTGAGTCCAGTGCAGATATATCTAAAGTAGGGTGTGTTTGATGCAACCATgcagtaaattaaaaaaagaggaacATATAAAGGAAAAGGAAGTGATTTCCTCTGTGTAAGATCAATAAAGTTTATCTTATCTCATAACCtgagtcaatgagagcagcagAACAAACTGTTCTAATTAATTATTGActgcatacacacagaaactTCAAATGTACAGTCACTTACTTTGACAGCCAAATTTAAGGAGAACATAattcttttgttttctgtgtgtgttattcAGATGGAATGGTATCTGGTCAAAAACAGGCTTTCAGGATCTCAGACATCTTTCTGAGAGGATTACCAAACACAAagcgtcccccccccccctaattGTTTCCAATAATTTTCAATCAAGTGTCATTGTTTTGAAGTATCTGGAGTTACAACCTTTCTCTATTCTTGTTAGGGAATTTGCTTTCTGTGAATTTCCGACTTTACCTTACGTCTCTGTTAGAGGCTTATAAGGGTTATGTTCTATTCTTGCTTTCTACCCCTCACATAACTATGTCTTATGTTACACGGTTTCCCAATTCTAGTTGAGTTGAGTGCATTATTATCTACTCATTCATTTATGACCGACATTTATTTCTAGAGAAATCTTTTGAcaagttgttttgttttggtaaCGGGTTGAAATCATATGTTGGTTCACTTTGTAAGATGATgatttttgtatattattaaaTTTCCTCCAGCTTGTGTA

Function

symbol description
slc12a9 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC12A9 (solute carrier family 12 member 9).

NR:

description
PREDICTED: solute carrier family 12 member 9-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K14429 SLC12A9, CCC6; solute carrier family 12 (potassium/chloride transporters), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
TU227916 False 352 lncRNA 0.34 1 23426788 23427139
TU227917 False 505 lncRNA 0.46 1 23427557 23428061
XM_039777792.1 True 5960 mRNA 0.44 14 23426794 23437928

Neighbor

gene id symbol gene type direction distance location
gucy2d LOC103372856 coding downstream 9514 23403258 ~ 23417274 (-)
si:ch211-284e13.4 LOC103372857,LOC102199942,LOC102306688 coding downstream 26303 23385395 ~ 23400485 (-)
slc25a15b LOC103372855,LOC107102302,LOC103395408,LOC107386491,LOC105929434 coding downstream 42619 23376973 ~ 23384169 (-)
LOC120543760 NA coding downstream 57705 23364403 ~ 23369083 (-)
grk1b LOC103372850,LOC100694101,LOC102298186,LOC101466666,LOC102197961 coding downstream 76956 23340483 ~ 23349832 (-)
pld2 LOC103370087 coding upstream 50937 23488865 ~ 23509158 (-)
chrne chrne,LOC104937283,LOC102292146,LOC101487116 coding upstream 73461 23511389 ~ 23521292 (-)
atp1b2b atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC101071453 coding upstream 94062 23531990 ~ 23542156 (-)
LOC120543802 nyap1,LOC103370091,LOC102779388 coding upstream 105107 23543035 ~ 23577496 (-)
srrt NA coding upstream 146861 23584789 ~ 23593960 (-)
G168041 LOC103372846 non-coding downstream 101451 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 192471 23164507 ~ 23234317 (-)
G167987 NA non-coding downstream 245316 23181118 ~ 23181472 (-)
G167970 NA non-coding downstream 277383 23148941 ~ 23149405 (-)
G167945 LOC103359643,LOC102303727,LOC102193670,LOC102789144 non-coding downstream 393709 23029611 ~ 23033079 (-)
G168161 NA non-coding upstream 167631 23605559 ~ 23606305 (-)
G168238 NA non-coding upstream 325619 23763547 ~ 23764139 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 667654 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 735898 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 888503 24326431 ~ 24327158 (-)
LOC120543557 NA other downstream 273379 23150844 ~ 23153409 (-)
si:ch211-117m20.4 LOC104950135,LOC102215356,LOC102305874,LOC101475389 other downstream 475052 22949507 ~ 22951736 (-)
zmp:0000001168 sipa1 other downstream 513873 22879716 ~ 22912915 (-)
G167902 NA other downstream 616336 22809714 ~ 22810452 (-)
mepcea mepce,LOC103353310,LOC101485584 other downstream 958172 22460531 ~ 22468616 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other upstream 12765 23450693 ~ 23485871 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other upstream 158971 23596899 ~ 23603892 (-)
G168162 NA other upstream 179347 23617275 ~ 23618121 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other upstream 358290 23796218 ~ 23811948 (-)
thoc2 thoc2,LOC102794734 other upstream 482636 23920564 ~ 23948860 (-)

Expression


Co-expression Network