G168161


Basic Information

Item Value
gene id G168161
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23605559 ~ 23606305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227962
AATTCTATAATATAAAACCCAGTGACCAGTATGCTGCTTCAAATTATCTTCACTCCTCCCCTCTGACCAATATACAGAGCCGAGGCTAATCCTCATTTTGGAGCAACAGCATCAGACACAACAATGTCTTGTCATCGTGTGGTTGTTTTGGCGCTTTTGGTTGTCTTACTGCTAAATGTTGTGGAGAATGAGGCTGCATCATTCCCTTGGTCTTGTCCCAGTCTAAGTGGAGTGTGTAGAAAGGTTTGCCTCCCGACAGAACTGTTCTTTGGACCTCTGGGCTGCGGAAAAGGCTTCTTGTGCTGTGTGTCTCATTTTCTATGAGAGCTGTCATTGCAGTCGTAAAAATGTCATTTAGCCATGCTAAAACAAGAAGCATCACAGAAAGCACTGTTGTGAAGGACTATATTTGGCTTTTTACTCTAATGTAACACAGTGGACGTTGGAATGTTAAATCAACtgcttgtatttttttgttgctgattttaatgcAGCTGAAATGGCTGAGGTgaagtaaaaaatgacattaaac

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU227962 True 532 lncRNA 0.41 3 23605559 23606305

Neighbor

gene id symbol gene type direction distance location
srrt NA coding downstream 11599 23584789 ~ 23593960 (-)
LOC120543802 nyap1,LOC103370091,LOC102779388 coding downstream 28063 23543035 ~ 23577496 (-)
atp1b2b atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC101071453 coding downstream 63403 23531990 ~ 23542156 (-)
chrne chrne,LOC104937283,LOC102292146,LOC101487116 coding downstream 84267 23511389 ~ 23521292 (-)
pld2 LOC103370087 coding downstream 96401 23488865 ~ 23509158 (-)
LOC120544077 LOC104954719,LOC103373429 coding upstream 20350 23626655 ~ 23655978 (-)
LOC120544657 NA coding upstream 59196 23665501 ~ 23667125 (-)
rnf121 rnf121,LOC100694640 coding upstream 61020 23667325 ~ 23679248 (-)
LOC120544653 LOC103367248,LOC104954773,LOC105929335 coding upstream 79920 23686225 ~ 23696226 (-)
rb1 rb1 coding upstream 91029 23697334 ~ 23717878 (-)
G168041 LOC103372846 non-coding downstream 280222 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 371242 23164507 ~ 23234317 (-)
G167987 NA non-coding downstream 424087 23181118 ~ 23181472 (-)
G167970 NA non-coding downstream 456154 23148941 ~ 23149405 (-)
G167945 LOC103359643,LOC102303727,LOC102193670,LOC102789144 non-coding downstream 572480 23029611 ~ 23033079 (-)
G168238 NA non-coding upstream 157242 23763547 ~ 23764139 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 499277 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 567521 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 720126 24326431 ~ 24327158 (-)
G168452 LOC104945802,LOC106516412 non-coding upstream 723204 24329509 ~ 24330155 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other downstream 1667 23596899 ~ 23603892 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other downstream 119688 23450693 ~ 23485871 (-)
slc12a9 slc12a9,LOC103370084 other downstream 167631 23426788 ~ 23437928 (-)
LOC120543557 NA other downstream 452150 23150844 ~ 23153409 (-)
si:ch211-117m20.4 LOC104950135,LOC102215356,LOC102305874,LOC101475389 other downstream 653823 22949507 ~ 22951736 (-)
G168162 NA other upstream 10970 23617275 ~ 23618121 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other upstream 189913 23796218 ~ 23811948 (-)
thoc2 thoc2,LOC102794734 other upstream 314259 23920564 ~ 23948860 (-)
LOC120544713 LOC104954531 other upstream 368249 23974554 ~ 23976321 (-)
radx LOC103366308,LOC106923634,LOC103133962,LOC106955728 other upstream 789471 24395776 ~ 24405877 (-)

Expression


Co-expression Network