LOC120543760


Basic Information

Item Value
gene id LOC120543760
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23364403 ~ 23369083 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776992.1
CCCTCATAGCCAACACAGGGCTCTGTGTCCTCCGCTGTAAATATTGGGGAACCTTTGAACCACTCCCCCTGTTTTAGTGAGAGTACTCCTGGCTACAGCTGGCCCACCACCATGGCCACGTCTCCCGTCAAAGACTTCCTGGTTACATATATAATGCCAGAAAAATGTTATGAGAGGATTTTCGTCAGCTTTTACATAAACGTGCCTTGCCTAACGTTTATAATGAACAGAGCTGTCGGATTATGGATCTTACTGGACACTTTCCTGGCACAGCTACTTCAGCTGTTGAAGATACTGTGGAGAAGAAGTGCAGATGGCCTGAGTCTGACCTCCGTGCTGCTGCAACTATATGCTTTCTCATGTCCTGTTGTGTATGCCATGGCCAACAACTTCCCACTCTTTGCCTGGGGTGAGAGGCTCTTCGCCTTGGCCCAGACCGCAGCGATTGTCTTCCTCATCCTGCATTATCGTGGTGAAACTCTAAAAGGTATGTTGTTCCTCTTGGCTTATGGGTGTCTAATGTTCCTTCTGGGCTCctacgcagcagcagcagctgtctcAGTAATGCAGACCTCAAGTTTGGCAACTTTAATTGCAAGCAAGGTTCTCCAGGCTGGAACCAACTACTGTAACGGCCACACAGGCCAACTGTCCACTCTGTCTGTGTTACTATCGTGGGCAGCGTCTCTGGGTGTTATCTTTGTGACTCTGCAGGAGACAGGAAGCTCGTTTGCCACTCTGTCACACACAGTGTCAGCCTGTCTCAGCGGGGTCCTCCTGGCCCAGGTCCTCTGCTACAGGAGCAGCACCACCACCTCTAGAAAGAAGAACGAGTAGAGGTGGAGGATGGTGACAAATGAACACTCAATATGCTGATCCTTCCTGTAATTCTAGGTATAGTAGGAAATGTTTACAGTGTCTTTTCTATAAATATGCCGGTGTTCTACACTCAGATCTACTTTAAAAGaaattgtgtgtctgtgtaaacaAGAACTCTCATTGTCATGCTATTTAATAATTTTAGACATGTTATTTCTGTAGTTAGTTTCCCATTATTGTGAGGGTGAGGGAATAAAAAATCTATTGTCGCTCTCCAGTGATTGAAATAAGATGACTTTTACACAGCTTTCAATGGTATCTGCAGGTAACAGTCAGTTGGGTTAACTGCTTTCAGTTCAAGGACAAACTGACAGAGCATCTACACGAATTCTTCCTCAAATTTCACAAGTCTGAGTAATTCCTAATCTCAGGGAAGAAGTGCAGTCATGCAGCAGACATATTGACACATGAAGAGTCTCTATACTCACTTCCTTCCTGCTCTCAAATGAGTCATCCGTGAGCGGGAACAAACAGAACATAACATTAAACTATCTTTCGTCAGATCAGGTCATTTCACTGATTATTTCCTCCTCTGTGGGTGATGGAACATTCTGATGATGATTCATGCCGTGTTGTGTCAGATTTGCTGTTGCTGTAGTTCTACTCGTACAGTTCCAAGCATCAAACAGCTTCAGGAAATGGGATATTCTTGAGGCGAGATTACCCAACACCTTACAGTAAACTGGAAGCTGGAAGTTAAGTGATTTGCTTGAGGGGGTTTTCAGAAATGAATGTCAATAATTTCCTTGTTAAGATGTCAGACCAAactgttcaacattttggacaaTGACGCACACTGCCATGCACAACTGACAGACTGAGAAAGTAATTTGTCCCCAGGGCCATACAACTCTACAATGcttcacaaaagtaaaaaaaaaatcagagctgttcaacatcacatctccttaagtcctctaatatttccttatttatgtcatcaactcatccatgattcat

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko00120 Primary bile acid biosynthesis
ko00360 Phenylalanine metabolism
ko00130 Ubiquinone and other terpenoid-quinone biosynthesis
ko04146 Peroxisome
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776992.1 True 1839 mRNA 0.44 7 23364403 23369083

Neighbor

gene id symbol gene type direction distance location
grk1b LOC103372850,LOC100694101,LOC102298186,LOC101466666,LOC102197961 coding downstream 14571 23340483 ~ 23349832 (-)
LOC120544729 NA coding downstream 29116 23330467 ~ 23335287 (-)
mrps31 NA coding downstream 46032 23313399 ~ 23318371 (-)
LOC120543864 LOC103395707 coding downstream 52096 23295406 ~ 23312307 (-)
f11r.1 NA coding downstream 91180 23263471 ~ 23273223 (-)
slc25a15b LOC103372855,LOC107102302,LOC103395408,LOC107386491,LOC105929434 coding upstream 7890 23376973 ~ 23384169 (-)
si:ch211-284e13.4 LOC103372857,LOC102199942,LOC102306688 coding upstream 16312 23385395 ~ 23400485 (-)
gucy2d LOC103372856 coding upstream 34175 23403258 ~ 23417274 (-)
pld2 LOC103370087 coding upstream 119782 23488865 ~ 23509158 (-)
chrne chrne,LOC104937283,LOC102292146,LOC101487116 coding upstream 142306 23511389 ~ 23521292 (-)
G168041 LOC103372846 non-coding downstream 39066 23323498 ~ 23325337 (-)
LOC120544733 NA non-coding downstream 130086 23164507 ~ 23234317 (-)
G167987 NA non-coding downstream 182931 23181118 ~ 23181472 (-)
G167970 NA non-coding downstream 214998 23148941 ~ 23149405 (-)
G167945 LOC103359643,LOC102303727,LOC102193670,LOC102789144 non-coding downstream 331324 23029611 ~ 23033079 (-)
G168161 NA non-coding upstream 236476 23605559 ~ 23606305 (-)
G168238 NA non-coding upstream 394464 23763547 ~ 23764139 (-)
G168351 pafah1b2,LOC108247589 non-coding upstream 736499 24105582 ~ 24108489 (-)
G168365 NA non-coding upstream 804743 24173826 ~ 24174101 (-)
G168431 NA non-coding upstream 957348 24326431 ~ 24327158 (-)
LOC120543557 NA other downstream 210994 23150844 ~ 23153409 (-)
si:ch211-117m20.4 LOC104950135,LOC102215356,LOC102305874,LOC101475389 other downstream 412667 22949507 ~ 22951736 (-)
zmp:0000001168 sipa1 other downstream 451488 22879716 ~ 22912915 (-)
G167902 NA other downstream 553951 22809714 ~ 22810452 (-)
mepcea mepce,LOC103353310,LOC101485584 other downstream 895787 22460531 ~ 22468616 (-)
slc12a9 slc12a9,LOC103370084 other upstream 57705 23426788 ~ 23437928 (-)
mink1 mink1,LOC100692298,LOC102200963,LOC107746403 other upstream 81610 23450693 ~ 23485871 (-)
rnf167 rnf167,LOC102777964,LOC102289272,LOC101483611 other upstream 227816 23596899 ~ 23603892 (-)
G168162 NA other upstream 248192 23617275 ~ 23618121 (-)
nlgn3b nlgn3b,LOC103367236,LOC101487455,LOC104954573 other upstream 427135 23796218 ~ 23811948 (-)

Expression


Co-expression Network