LOC120543867 (LOC103365129)


Basic Information

Item Value
gene id LOC120543867
gene name LOC103365129
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 20752417 ~ 20767666 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777219.1
ATGGCAAAGGCTTTGGGGCTGTTTGCgagttgtttgttgtttgttctcTCCTCCGGTGTGGAAGGGAAGCGCAGCAGTGAGAGAGTTTACTATGTGGGGATCATTGAGGACTTTTGGGATTACGCACCAAGTGGGAAAAACTTGCTTAACGGGCAAGACGTCGAAAATGATGAGCATGCATCTGTGTTCCTGGAAAGAGGACCCCACCGTATTGGCCGTGTTTATAAGAAGGCCATGTTCCGACAGTACACAGATGCTACGTACAGCCGCCTGGCCTCCCGACCTGTCTGGTTGGGCTTCCTGGGCCCCATACTGCGAGCTGAGGTTGATGAAACTATTGTGGTCCACCTGAAGAACTTTGCAACCAGAAACTACTCTATGCATCCTCATGGAGTTTTCTATGAGAAGAATACAGAGGGGGCGCTCTATCCAGATGGGACATCAAACAAGCTGAAGGGGGATGACTCTGTTCCTCCGGGAGGCATCTACACCTACCGCTGGGAGGTCAGACCAGAATATGCCCCCACGGATGACGATGCCAACTGCCTGACCTGGATCTACCATTCTCACTGGGAAGCCCCCAGGGACATCGCCTCAGGACTTATCGGGGCTCTGCTCACCTGCAAAAAAGGAATCTTAAAGGAGACAAACGATCCAGTCCAGGGTCAGACAGAGCCAGAGTCTGTTTTAGAGTCAGTTCGAAATGATGTGGACCAGGATGTCTTCCTGATGTTCAACGTGGTGGATGAAAACAATAGTTGGTACGTGGAGGACAACATTCAGAAGTGCACTGATCCAGCTGGAGTTGACCAGGAAGACCCAGACTTTAAGGAGTCAAATCTAATGCATGCTATTAATGGCTACATGTTTGGTAACCTGCCCGGAATCGAGTTATGCCAGCACCGTGCAGTATCCTGGCATTTGTTTGGCATTGGTAACGAGGTGgacattcatactgcctttttcCATGGGAATACACTGCTGGACCGCGGCCACCGCACCGACGTCCTCAGCCTGTTCCCAGCCACGTTTGCTACAGCTAAGATGGTCCCGAAAGCATCAGGAAAGTGGTTGCTGACCTGCCAGGTTAATGACCACTTACAGGCTGGAATGCAGGCCTTTTATGAAGTGAAGTCATGCGGCAGTGAGGCCGGCTCTACAGTGATGGCTGGCGTTGTGAGGAATTACTACCTGGCAGCAAAGAAAGTCCTGTGGGGCTATGGTCCCTCAGGAAGGGATCTGATTAATAATGTATCCCTCACTGAGCCTGACAGTGCATCAGAGGTTTATTTTGGCAGAGATGGTGGAAGGATTGGAGGTGACTACATGAAAGTGATATACGAAGAGTACACAGACAATACCTTCACCACCACAAAGCCACAAACACCTGATACTCAACACTTAGGAATATTAGGTCCAGTCCTGAGGGCAGAGGAGGGAGACACTCTCAGAGTGACATTCATGAATAAAGCTGATAGAAACTACAGCATCCAGCCTCATGGCCTGAACTATGATAAACACTTCCAAGGAAGCAACTATGAAGATGGTGTTGACAAGCCAGGCTCTCACGTTGGTCCAGGAGAGAAGTTCACCTACACCTGGCAGGTGCAAGAAGGTCCATCTTCATCTGATACTGCCTGTATCCCCTACTTATACTACTCCGCCACTGATCCCGCCAAGGACACTAACTCTGGGTTAGTGGGACCTCTGCTTGTGTGCAAGAAGGGAACGCTGGGAGAGAACGGAACCCAGAAGGGTCTGGATAAGGAGTTCTTCCTTCTGTTTTCTGTCATGGATGAAAACATGAGCTGGTATTTGGAGGAGAATATTGAGAAGTTTAGCAGCAACGACACAGATCCAGAGAGCAATTTGATGCACGCTGTAAATGGACGCATGTATGGGAACCTTCAGGGAGTGGAGATGTGTGCCGGGGACAAAGTTATGTGGTACACCTTTGGGCTTGGTACAGAGGTGGACATCCATGGTATTTATTTCGAGGGGAACACCTTCAAGAAGCAGAGCACAACACGTGACACTCTTAGCCTGTTCCCTCACACCACTGCTACTGTCGCCATGGAGCCAAACACTCCTGGTATGTATGAGATAAGCTGCAGAGTAACAGACCACTACTCAGCTGGCATGAGGCAGCAGTACCGAGTAAACCTGTGCCCACAACACAAATTGAAGCTCACTAACACAGAACAGCCAACCAAGATTGTGCAGTATTTTATTAGTGCTGAAGAAATAGAGTGGGACTTCTCACCTGAGAGAGACTGGGAGCTGGAGAAACACCACGGCAAATTAGAGGACAGTCCAGGCAATATATTTGTGGCGAAAGGAAAAGACAGAATTGGCTCGCGCTATAAGAAAGTGGTGTATAGAGAATACACCAGTGACACCTTCAGAGTTCAGAAGAAACGACAGCCCAACCAACAACACTTGGAAATTCTAGGTCCAATAATCAAAGCAGAGGTAGGAGAGCAGATTGTGATCACATTCAAGAACAAAGCCAGTCGGCCATACTCAATTGGCGCACATGGAGTGAGGGCCAGCGGCGCACACATTCCTGTCAAACCTGACCACATAATGGAGATGACGTGGGATGTTCTTAAAAGCTCTGGTCCAGGGGTCTCAGATCCTAACTGCATCTCTTACGCTTACTATTCCAATGTTGACTTCATTAAGGATCTGTACAGTGGTCTTCTGGGGCCTCTGGTGATATGCAGGCCCGGGACCCTGCAGCACGGCGAGGGGCCCGACAGACAGAGGAGTGACGTGGAAAAGGAGTTTGCTCTGCTCTTTATGGTGTATGATGAAAACCAGTCCTGGTACTTGGACGACAACATCAGAACATACCTTGGCGTTGACCCGCATTCCTTCATTCCAGATGAAGGCTTTGAGGAGAGTAACTTAATGCACGGGATCAATGGTAAACTGTATGGTAACCTCCATGGACTGGTGATGATGGAAGGCCAGAAAGTTGACTGGTATCTACTGGGCATGGGCAACGAAGTGGACCTGCACACTGTTCATTTCCACGCTGAAACTTTTACCTACAAGACGGACCTTGTGCACCGTGCAGACGTCTTTGATCTTTTCCCCGGGACtttccagactgtggagatggtTGCTGGGAACCCAGGGACTTGGTTGCTCCACTGTCATGTGAGTGACCACATTCATGCTGGCATGGAGACCACTTTCACCATCCAAGAATACTCCTCAGATGAAAACTTCTCAGATGCTGCAGCGCCAGGAACTGAAGGCTCCATTAAGACGTTGCTGCTCTCACTGGCACTTGGCCTCATGGCTGTAGGTGGACTGCACTAATGAAGGGACTGGGCTGTGTGTAACCATAACTGTGGTTATTAATGTACTTGAAAAAATCCAGGGATAGAATCACTGTTTCATGTATTTTTGACATTATGTAGTAAAAACCAAGAAATGATCAGACACAATATAGCAAGGGCTGTACAATCACGTATAAAGTTGAGTTCTTTAAATTTCTTAGGACTAAAAGAAGCATTGTATATATGTGGATTATTTCTATTTTCAGTCATGTGTTTAACGTTTTGCAAATCATTGATGTACCAAACATTTGATTCCATTTATGAATGTGCAATAAAGACATTTATTCAAC
>XM_039777220.1
GTCGCTCTCCGGCTGAATAGACCAACTGTTTTCCTTTGTAGCGTTTCACAAGTGCTGCCTGCAGCCCCAACGCACACTGTTAATACGCACTTGCATGGAAGAGTCAACGGAGGTTTCCACTTGTTCCTGTTTAACCAAAACCCGCTAACTCTCAGCCCTACATCTGACGGAGCGATCAGCTCAACATGGCAAAGGCTTTGGGGCTGTTTGCgagttgtttgttgtttgttctcTCCTCCGGTGTGGAAGGGAAGCGCAGCAGTGAGAGAGTTTACTATGTGGGGATCATTGAGGACTTTTGGGATTACGCACCAAGTGGGAAAAACTTGCTTAACGGGCAAGACGTCGAAAATGATGAGCATGCATCTGTGTTCCTGGAAAGAGGACCCCACCGTATTGGCCGTGTTTATAAGAAGGCCATGTTCCGACAGTACACAGATGCTACGTACAGCCGCCTGGCCTCCCGACCTGTCTGGTTGGGCTTCCTGGGCCCCATACTGCGAGCTGAGGTTGATGAAACTATTGTGGTCCACCTGAAGAACTTTGCAACCAGAAACTACTCTATGCATCCTCATGGAGTTTTCTATGAGAAGAATACAGAGGGGGCGCTCTATCCAGATGGGACATCAAACAAGCTGAAGGGGGATGACTCTGTTCCTCCGGGAGGCATCTACACCTACCGCTGGGAGGTCAGACCAGAATATGCCCCCACGGATGACGATGCCAACTGCCTGACCTGGATCTACCATTCTCACTGGGAAGCCCCCAGGGACATCGCCTCAGGACTTATCGGGGCTCTGCTCACCTGCAAAAAAGGAATCTTAAAGGAGACAAACGATCCAGTCCAGGGTCAGACAGAGCCAGAGTCTGTTTTAGAGTCAGTTCGAAATGATGTGGACCAGGATGTCTTCCTGATGTTCAACGTGGTGGATGAAAACAATAGTTGGTACGTGGAGGACAACATTCAGAAGTGCACTGATCCAGCTGGAGTTGACCAGGAAGACCCAGACTTTAAGGAGTCAAATCTAATGCATGCTATTAATGGCTACATGTTTGGTAACCTGCCCGGAATCGAGTTATGCCAGCACCGTGCAGTATCCTGGCATTTGTTTGGCATTGGTAACGAGGTGgacattcatactgcctttttcCATGGGAATACACTGCTGGACCGCGGCCACCGCACCGACGTCCTCAGCCTGTTCCCAGCCACGTTTGCTACAGCTAAGATGGTCCCGAAAGCATCAGGAAAGTGGTTGCTGACCTGCCAGGTTAATGACCACTTACAGGCTGGAATGCAGGCCTTTTATGAAGTGAAGTCATGCGGCAGTGAGGCCGGCTCTACAGTGATGGCTGGCGTTGTGAGGAATTACTACCTGGCAGCAAAGAAAGTCCTGTGGGGCTATGGTCCCTCAGGAAGGGATCTGATTAATAATGTATCCCTCACTGAGCCTGACAGTGCATCAGAGGTTTATTTTGGCAGAGATGGTGGAAGGATTGGAGGTGACTACATGAAAGTGATATACGAAGAGTACACAGACAATACCTTCACCACCACAAAGCCACAAACACCTGATACTCAACACTTAGGAATATTAGGTCCAGTCCTGAGGGCAGAGGAGGGAGACACTCTCAGAGTGACATTCATGAATAAAGCTGATAGAAACTACAGCATCCAGCCTCATGGCCTGAACTATGATAAACACTTCCAAGGAAGCAACTATGAAGATGGTGTTGACAAGCCAGGCTCTCACGTTGGTCCAGGAGAGAAGTTCACCTACACCTGGCAGGTGCAAGAAGGTCCATCTTCATCTGATACTGCCTGTATCCCCTACTTATACTACTCCGCCACTGATCCCGCCAAGGACACTAACTCTGGGTTAGTGGGACCTCTGCTTGTGTGCAAGAAGGGAACGCTGGGAGAGAACGGAACCCAGGGTCTGGATAAGGAGTTCTTCCTTCTGTTTTCTGTCATGGATGAAAACATGAGCTGGTATTTGGAGGAGAATATTGAGAAGTTTAGCAGCAACGACACAGATCCAGAGAGCAATTTGATGCACGCTGTAAATGGACGCATGTATGGGAACCTTCAGGGAGTGGAGATGTGTGCCGGGGACAAAGTTATGTGGTACACCTTTGGGCTTGGTACAGAGGTGGACATCCATGGTATTTATTTCGAGGGGAACACCTTCAAGAAGCAGAGCACAACACGTGACACTCTTAGCCTGTTCCCTCACACCACTGCTACTGTCGCCATGGAGCCAAACACTCCTGGTATGTATGAGATAAGCTGCAGAGTAACAGACCACTACTCAGCTGGCATGAGGCAGCAGTACCGAGTAAACCTGTGCCCACAACACAAATTGAAGCTCACTAACACAGAACAGCCAACCAAGATTGTGCAGTATTTTATTAGTGCTGAAGAAATAGAGTGGGACTTCTCACCTGAGAGAGACTGGGAGCTGGAGAAACACCACGGCAAATTAGAGGACAGTCCAGGCAATATATTTGTGGCGAAAGGAAAAGACAGAATTGGCTCGCGCTATAAGAAAGTGGTGTATAGAGAATACACCAGTGACACCTTCAGAGTTCAGAAGAAACGACAGCCCAACCAACAACACTTGGAAATTCTAGGTCCAATAATCAAAGCAGAGGTAGGAGAGCAGATTGTGATCACATTCAAGAACAAAGCCAGTCGGCCATACTCAATTGGCGCACATGGAGTGAGGGCCAGCGGCGCACACATTCCTGTCAAACCTGACCACATAATGGAGATGACGTGGGATGTTCTTAAAAGCTCTGGTCCAGGGGTCTCAGATCCTAACTGCATCTCTTACGCTTACTATTCCAATGTTGACTTCATTAAGGATCTGTACAGTGGTCTTCTGGGGCCTCTGGTGATATGCAGGCCCGGGACCCTGCAGCACGGCGAGGGGCCCGACAGACAGAGGAGTGACGTGGAAAAGGAGTTTGCTCTGCTCTTTATGGTGTATGATGAAAACCAGTCCTGGTACTTGGACGACAACATCAGAACATACCTTGGCGTTGACCCGCATTCCTTCATTCCAGATGAAGGCTTTGAGGAGAGTAACTTAATGCACGGGATCAATGGTAAACTGTATGGTAACCTCCATGGACTGGTGATGATGGAAGGCCAGAAAGTTGACTGGTATCTACTGGGCATGGGCAACGAAGTGGACCTGCACACTGTTCATTTCCACGCTGAAACTTTTACCTACAAGACGGACCTTGTGCACCGTGCAGACGTCTTTGATCTTTTCCCCGGGACtttccagactgtggagatggtTGCTGGGAACCCAGGGACTTGGTTGCTCCACTGTCATGTGAGTGACCACATTCATGCTGGCATGGAGACCACTTTCACCATCCAAGAATACTCCTCAGATGAAAACTTCTCAGATGCTGCAGCGCCAGGAACTGAAGGCTCCATTAAGACGTTGCTGCTCTCACTGGCACTTGGCCTCATGGCTGTAGGTGGACTGCACTAATGAAGGGACTGGGCTGTGT

Function

NR:

description
PREDICTED: hephaestin-like protein 1 isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005507 copper ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K14735 HEPH; hephaestin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777219.1 True 3640 mRNA 0.48 21 20752602 20767666
XM_039777220.1 False 3531 mRNA 0.50 21 20752417 20767375

Neighbor

gene id symbol gene type direction distance location
cadm2a cadm2,LOC102777758,LOC101472425,LOC100702992 coding upstream 65831 20458927 ~ 20686586 (+)
stoml3b LOC104923823,LOC100702455,LOC101474847,LOC102201765,LOC102781741,LOC102292984 coding upstream 615084 20133416 ~ 20137333 (+)
proser1 proser1 coding upstream 620537 20123274 ~ 20131880 (+)
fgl1b LOC104952254,LOC102295976,LOC102199887,LOC101476422,LOC102781098 coding upstream 643857 20105237 ~ 20108560 (+)
smpd1 smpd1,LOC102780536 coding upstream 656733 20089272 ~ 20095684 (+)
slc43a2b LOC101471178,LOC104939143 coding downstream 1210 20768876 ~ 20781567 (+)
pitpnab pitpna,LOC100703534,LOC103395107,LOC108237022,LOC101470402 coding downstream 16854 20784520 ~ 20800277 (+)
inpp5kb LOC104945604,LOC100702630,LOC102306066,LOC101469729,LOC102200916 coding downstream 33577 20801243 ~ 20813986 (+)
LOC120543782 slc47a1,LOC103365135 coding downstream 96443 20864109 ~ 20888270 (+)
tmigd1 NA coding downstream 145526 20913192 ~ 20916692 (+)
G167015 NA non-coding upstream 438908 20313244 ~ 20313509 (+)
G166979 NA non-coding upstream 557985 20138733 ~ 20194432 (+)
G166824 NA non-coding upstream 948361 19802727 ~ 19804056 (+)
G166773 hunk,LOC104954747 non-coding upstream 1063036 19686648 ~ 19689381 (+)
G166771 NA non-coding upstream 1076148 19675620 ~ 19676269 (+)
LOC120543783 NA non-coding downstream 88070 20855736 ~ 20864107 (+)
G167123 NA non-coding downstream 156930 20924596 ~ 20925407 (+)
G167195 NA non-coding downstream 264702 21032368 ~ 21032748 (+)
G167196 NA non-coding downstream 265530 21033196 ~ 21033400 (+)
G167199 NA non-coding downstream 284969 21052635 ~ 21054013 (+)
mtnr1bb LOC103354484,LOC100701643,LOC101479329,LOC101074288,LOC103475521,LOC107386965 other upstream 729885 19988882 ~ 20022532 (+)
map3k7cl map3k7cl other upstream 906364 19835353 ~ 19846053 (+)
grik1a LOC101481540,LOC100699029,LOC104923829,LOC102784741 other upstream 921392 19801593 ~ 19831025 (+)
scaf4a scaf4,LOC104923807 other upstream 1038695 19700172 ~ 19713722 (+)
trnaw-cca_18 NA other upstream 1305274 19447072 ~ 19447143 (+)
nle1 nle1 other downstream 47610 20815276 ~ 20822560 (+)
dynll2b LOC107089378,LOC101174042,LOC103395122,LOC106514090,LOC107387006,LOC103140945 other downstream 199196 20966862 ~ 20968815 (+)
layna layn,LOC100708261,LOC101467228,LOC104929931 other downstream 406328 21173994 ~ 21180752 (+)
si:dkey-71l1.1 LOC101485670,LOC102299221,LOC103355094,LOC102789525,LOC104929928 other downstream 424385 21192051 ~ 21197037 (+)
mia mia other downstream 434884 21202550 ~ 21204162 (+)

Expression


Co-expression Network