wscd1b (wscd1)


Basic Information

Item Value
gene id wscd1b
gene name wscd1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31243993 ~ 31265687 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778052.1
GTAAGCGGGGGAACGGCGATCGTAACGGCATAAGTGGTCGCTCGAAACAAGGATGCCGAGCGTACGCCGCTCCACCGCTGAAGCTTTTCCCTGAGGATCATCCTGGAGTCAGTGACCACAGCCTTGGATATTAAACCCCTCTCTGTTGACACATCCATTGATCCACTGCTGCTATTGGACGATGAAGGACCAAGACACAATGTCTACAGCATGACCTGACGCTGCAGGTCTTTCCAAGATTATGAAGAAATGAGTCACATCTTCTCACTCCTAATCCATGAAATGGCCTTCCACTGAGGTGAGAGACAGTAACCAGGATGGTGGCGCCCCACTACAGGCTGCACTGCTTCTTGAAGCGGGCTCAGATGCTGTTGCTCTGCCTGGGTATTGCCTATCTGATGGCAGGCAGCATCCTTCTGCTGCAGCGCTCCAGCATCAGAATAGCCCAGCCAAACCTGGCCAGCCTGCCGCCTCTGCTGTCCCTCGCAGCGCCTCCTACCGCCCTCAGGGCGTCAGGCCTGGGCGTGAGGGCGCGCTCCAGATGGGCCGCCATTCAGCCTGTGTCTGCAGCGGGAGCCAAGGCAGGGCGACACTGGCCCGCTTCCCAAAGCCTGGGGGTCCAACACGTGCATCGCCGCTGGTTTCACAGTCTGCTGCCAGAGAGCCCAGAGCAGAGAGTATCTCTCCACAGGAACAGCAGACATAAAGGAACCTACATGGGTTGCTTTCTGCACAACGCCAGCGAGCGAGCCCTGGGAGGAACCATGCTTTATGACCTGCGCAAAATGACCAGTTCTCTGTGTCAAGACACCTGCTCAGAAAGtGGGTACCAGTTTGCAGGTCTGGAGTATGGAGCTGAATGCCACTGCGGGAACCGGATCAGTAGCCCACAGGCTCCTGAAGAGGATTGTAGTCTGGTGTGTCGGGGAGAGAGGGGGACTCCCTGTGGAGGTGTAGGCCGACTCTCCATTTACAAGGTGGAGGAGCAGCTGCCAGGTCACAGAAAGTTCAGAAATGTTCACTACCGCGGTTGCTTCAAGTTGCCGAAAAGCACCATCAGCACCTTCCCCGTCCATTCCTTTCAGCCCAACCTAACCACGCAGTCCTGCATCGAGACCTGCACAGACAAGGAGCTGCTGCTGGCTGTGTTCAAGAAGCCCCACTGTTTCTGTGCGTGGACGTCCTCTCTTTTCAGTCTCAGCCAGCAGTCTGACAGCCAGCAGTGCGTGGGGCTGAATCACACCATCAACGCCACGCCCACAGCACCCACTGAGCATGACCACTACCAGGTGTATCACACACCTGTGCTTGACTCCAGGTGCAAAGAGAGGATGTTTCTGCCTCAGAGATCCAGCTCCCTGGTGGCTCTTTCTAGTTTTCCTGGTGCAGGCAACACCTGGGTACGACACCTGATCGAGCTCGTGACTGGCTACTACACTGGCAGCTTCTATTTCGACGGCACACTGTACAACAGAGGTTTCAAAGGAGAGAAGGACTACTGGAAGAGTGGCCGCAGCATCTGCGTCAAGACCCACGAGAGCGGTCAGAAAGAGATTGAGATGTTCGATTCGGCCATCCTGCTGATTCGAAACCCTTACCGCTCCCTCGTGGCTGAATTCAACCGCAAGTGTGCCGGCCATTTAGGACACGCCACAGATGCACAGTGGAAAAGCAAAGAATGGCCAGAATTTGTCTCCAGTTACGCCCCCTGGTGGGCGTCCCACGCTCTGAGCTGGGTAAAGTTTGGACGCCGCCTGCTGGTGGTGCATTACGAGGAGCTGCAGAGAGCTCTTCTCCCTCAGCTCCAGCTCATCACAGCCTTTCTAAACGTCAGTATGACTGAGGAGAGGCTGCTCTGTGCCCAGAGCAACCAGGACGGCCATTTCAAGCGCTCGGGGGCGCAGCAGCCCTCTTTTGATCCATTCACTCCTGACATGAGACAGATGATTGACCCCTTCATTCACACTGTTGACGAGGCACTGCAGAGCAGGAACCTTAGCGGACTTCCACATGAATACCTTCCCAGATGATGATCTGAAAAGGTCATACATtagcccttttttttaaatgttccagCAGGGGTTTGTGAGAGAGAAGTTCTTCCCCTGAGTGCTCTGCAgggaacagacacacactggcTGATGTAAGTGGGCCACCAGACTCTTTGATAAGCCAGACGCGCCGTGAATGGCCGTAGACTCATGAAAGCAGACTGGAGGTCACTGGAGGAAACATGATAATTCATTGTGAAATCCGATGGTGAAGAGTGAGTAAAAGCCTCGGGGCCGGGACTGCCTCTCGGAAGAGccgcaaatatgacaaatactCAGAGAGGATTTGACATGATTTGTTGGCCTGCAGAGTTGGGATTATCTAGCAAAGTGCCCGACTGCACAAATATGAGTGGATAAGTCCAGGATGGACTCATTTTAGTAGAAGAGGGTTTTCTGTGGCTCGTTATAATTTCACTTTAGTACGTATACTGTGTTTAAGCATACACCCACGTTAATACAAATTCATACTAACACAGATGACAGCCACAGCTTTAGCATTACTTAGATTATACAGAATTTCTGTGGTAATTCACTGGTTGCTACAGGTTTGCGATCATGGTGGATAGAAGCCTCAAAGCTGCTACGTGTGGCTGTAAGGACTTTCCATGCAACAAGTTGGACCATACATGGACTCACAAATATGTTGATCACAATGCAACTGCTTAAAACTGTAAACTGAAATCCATCTGGATCTATGAGTATTTTACTTCATTACATGCATTCAGTTTTATTAAAGTTGTTTACCCTCGGA
>XM_039778053.1
GAACGGCGATCGTAACGGCATAAGTGGTCGCTCGAAACAAGGATGCCGAGCGTACGCCGCTCCACCGCTGAAGcCTCAGCTTTTCCCTGAGGATCATCCTGGAGTCAGTGACCACAGCCTTGGATATTAAACCCCTCTCTGTTGACACATCCATTGATCCACTGCTGCTATTGGACGATGAAGGACCAAGACACAATGTCTACAGCATGACCTGACGCTGCAGGTCTTTCCAAGATTATGAAGAAATGAGTCACATCTTCTCACTCCTAATCCATGAAATGGCCTTCCACTGAGGTGAGAGACAGTAACCAGGATGGTGGCGCCCCACTACAGGCTGCACTGCTTCTTGAAGCGGGCTCAGATGCTGTTGCTCTGCCTGGGTATTGCCTATCTGATGGCAGGCAGCATCCTTCTGCTGCAGCGCTCCAGCATCAGAATAGCCCAGCCAAACCTGGCCAGCCTGCCGCCTCTGCTGTCCCTCGCAGCGCCTCCTACCGCCCTCAGGGCGTCAGGCCTGGGCGTGAGGGCGCGCTCCAGATGGGCCGCCATTCAGCCTGTGTCTGCAGCGGGAGCCAAGGCAGGGCGACACTGGCCCGCTTCCCAAAGCCTGGGGGTCCAACACGTGCATCGCCGCTGGTTTCACAGTCTGCTGCCAGAGAGCCCAGAGCAGAGAGTATCTCTCCACAGGAACAGCAGACATAAAGGAACCTACATGGGTTGCTTTCTGCACAACGCCAGCGAGCGAGCCCTGGGAGGAACCATGCTTTATGACCTGCGCAAAATGACCAGTTCTCTGTGTCAAGACACCTGCTCAGAAAGtGGGTACCAGTTTGCAGGTCTGGAGTATGGAGCTGAATGCCACTGCGGGAACCGGATCAGTAGCCCACAGGCTCCTGAAGAGGATTGTAGTCTGGTGTGTCGGGGAGAGAGGGGGACTCCCTGTGGAGGTGTAGGCCGACTCTCCATTTACAAGGTGGAGGAGCAGCTGCCAGGTCACAGAAAGTTCAGAAATGTTCACTACCGCGGTTGCTTCAAGTTGCCGAAAAGCACCATCAGCACCTTCCCCGTCCATTCCTTTCAGCCCAACCTAACCACGCAGTCCTGCATCGAGACCTGCACAGACAAGGAGCTGCTGCTGGCTGTGTTCAAGAAGCCCCACTGTTTCTGTGCGTGGACGTCCTCTCTTTTCAGTCTCAGCCAGCAGTCTGACAGCCAGCAGTGCGTGGGGCTGAATCACACCATCAACGCCACGCCCACAGCACCCACTGAGCATGACCACTACCAGGTGTATCACACACCTGTGCTTGACTCCAGGTGCAAAGAGAGGATGTTTCTGCCTCAGAGATCCAGCTCCCTGGTGGCTCTTTCTAGTTTTCCTGGTGCAGGCAACACCTGGGTACGACACCTGATCGAGCTCGTGACTGGCTACTACACTGGCAGCTTCTATTTCGACGGCACACTGTACAACAGAGGTTTCAAAGGAGAGAAGGACTACTGGAAGAGTGGCCGCAGCATCTGCGTCAAGACCCACGAGAGCGGTCAGAAAGAGATTGAGATGTTCGATTCGGCCATCCTGCTGATTCGAAACCCTTACCGCTCCCTCGTGGCTGAATTCAACCGCAAGTGTGCCGGCCATTTAGGACACGCCACAGATGCACAGTGGAAAAGCAAAGAATGGCCAGAATTTGTCTCCAGTTACGCCCCCTGGTGGGCGTCCCACGCTCTGAGCTGGGTAAAGTTTGGACGCCGCCTGCTGGTGGTGCATTACGAGGAGCTGCAGAGAGCTCTTCTCCCTCAGCTCCAGCTCATCACAGCCTTTCTAAACGTCAGTATGACTGAGGAGAGGCTGCTCTGTGCCCAGAGCAACCAGGACGGCCATTTCAAGCGCTCGGGGGCGCAGCAGCCCTCTTTTGATCCATTCACTCCTGACATGAGACAGATGATTGACCCCTTCATTCACACTGTTGACGAGGCACTGCAGAGCAGGAACCTTAGCGGACTTCCACATGAATACCTTCCCAGATGATGATCTGAAAAGGTCATACATtagcccttttttttaaatgttccagCAGGGGTTTGTGAGAGAGAAGTTCTTCCCCTGAGTGCTCTGCAgggaacagacacacactggcTGATGTAAGTGGGCCACCAGACTCTTTGATAAGCCAGACGCGCCGTGAATGGCCGTAGACTCATGAAAGCAGACTGGAGGTCACTGGAGGAAACATGATAATTCATTGTGAAATCCGATGGTGAAGAGTGAGTAAAAGCCTCGGGGCCGGGACTGCCTCTCGGAAGAGccgcaaatatgacaaatactCAGAGAGGATTTGACATGATTTGTTGGCCTGCAGAGTTGGGATTATCTAGCAAAGTGCCCGACTGCACAAATATGAGTGGATAAGTCCAGGATGGACTCATTTTAGTAGAAGAGGGTTTTCTGTGGCTCGTTATAATTTCACTTTAGTACGTATACTGTGTTTAAGCATACACCCACGTTAATACAAATTCATACTAACACAGATGACAGCCACAGCTTTAGCATTACTTAGATTATACAGAATTTCTGTGGTAATTCACTGGTTGCTACAGGTTTGCGATCATGGTGGATAGAAGCCTCAAAGCTGCTACGTGTGGCTGTAAGGACTTTCCATGCAACAAGTTGGACCATACATGGACTCACAAATATGTTGATCACAATGCAACTGCTTAAAACTGTAAACTGAAATCCATCTGGATCTATGAGTATTTTACTTCATTACATGCATTCAGTTTTATTAAAGTTGTTTACCCTCGGA
>XM_039778054.1
GTAAGCGGGGGAACGGCGATCGTAACGGCATAAGTGGTCGCTCGAAACAAGGATGCCGAGCGTACGCCGCTCCACCGCTGAAGCTTTTCCCTGAGGATCATCCTGGAGTCAGTGACCACAGCCTTGGATATTAAACCCCTCTCTGTTGACACATCCATTGATCCACTGCTGCTATTGGACGATGAAGGACCAAGACACAATGTCTACAGCATGACCTGACGCTGCAGGTCTTTCCAAGATTATGAAGAAATGAGTCACATCTTCTCACTCCTAATCCATGAAATGGCCTTCCACTGAGGTGAGAGACAGTAACCAGGATGGTGGCGCCCCACTACAGGCTGCACTGCTTCTTGAAGCGGGCTCAGATGCTGTTGCTCTGCCTGGGTATTGCCTATCTGATGGCAGGCAGCATCCTTCTGCTGCAGCGCTCCAGCATCAGAATAGCCCAGCCAAACCTGGCCAGCCTGCCGCCTCTGCTGTCCCTCGCAGCGCCTCCTACCGCCCTCAGGGCGTCAGGCCTGGGCGTGAGGGCGCGCTCCAGATGGGCCGCCATTCAGCCTGTGTCTGCAGCGGGAGCCAAGGCAGGGCGACACTGGCCCGCTTCCCAAAGCCTGGGGGTCCAACACGTGCATCGCCGCTGGTTTCACAGTCTGCTGCCAGAGAGCCCAGAGCAGAGAGTATCTCTCCACAGGAACAGCAGACATAAAGGAACCTACATGGGTTGCTTTCTGCACAACGCCAGCGAGCGAGCCCTGGGAGGAACCATGCTTTATGACCTGCGCAAAATGACCAGTTCTCTGTGTCAAGACACCTGCTCAGAAAGtGGGTACCAGTTTGCAGGTCTGGAGTATGGAGCTGAATGCCACTGCGGGAACCGGATCAGTAGCCCACAGGCTCCTGAAGAGGATTGTAGTCTGGTGTGTCGGGGAGAGAGGGGGACTCCCTGTGGAGGTGTAGGCCGACTCTCCATTTACAAGGTGGAGGAGCAGCTGCCAGGTCACAGAAAGTTCAGAAATGTTCACTACCGCGGTTGCTTCAAGTTGCCGAAAAGCACCATCAGCACCTTCCCCGTCCATTCCTTTCAGCCCAACCTAACCACGCAGTCCTGCATCGAGACCTGCACAGACAAGGAGCTGCTGCTGGCTGTGTTCAAGAAGCCCCACTGTTTCTGTGCGTGGACGTCCTCTCTTTTCAGTCTCAGCCAGCAGTCTGACAGCCAGCAGTGCGTGGGGCTGAATCACACCATCAACGCCACGCCCACAGCACCCACTGAGCATGACCACTACCAGGTGTATCACACACCTGTGCTTGGTTTCAAAGGAGAGAAGGACTACTGGAAGAGTGGCCGCAGCATCTGCGTCAAGACCCACGAGAGCGGTCAGAAAGAGATTGAGATGTTCGATTCGGCCATCCTGCTGATTCGAAACCCTTACCGCTCCCTCGTGGCTGAATTCAACCGCAAGTGTGCCGGCCATTTAGGACACGCCACAGATGCACAGTGGAAAAGCAAAGAATGGCCAGAATTTGTCTCCAGTTACGCCCCCTGGTGGGCGTCCCACGCTCTGAGCTGGGTAAAGTTTGGACGCCGCCTGCTGGTGGTGCATTACGAGGAGCTGCAGAGAGCTCTTCTCCCTCAGCTCCAGCTCATCACAGCCTTTCTAAACGTCAGTATGACTGAGGAGAGGCTGCTCTGTGCCCAGAGCAACCAGGACGGCCATTTCAAGCGCTCGGGGGCGCAGCAGCCCTCTTTTGATCCATTCACTCCTGACATGAGACAGATGATTGACCCCTTCATTCACACTGTTGACGAGGCACTGCAGAGCAGGAACCTTAGCGGACTTCCACATGAATACCTTCCCAGATGATGATCTGAAAAGGTCATACATtagcccttttttttaaatgttccagCAGGGGTTTGTGAGAGAGAAGTTCTTCCCCTGAGTGCTCTGCAgggaacagacacacactggcTGATGTAAGTGGGCCACCAGACTCTTTGATAAGCCAGACGCGCCGTGAATGGCCGTAGACTCATGAAAGCAGACTGGAGGTCACTGGAGGAAACATGATAATTCATTGTGAAATCCGATGGTGAAGAGTGAGTAAAAGCCTCGGGGCCGGGACTGCCTCTCGGAAGAGccgcaaatatgacaaatactCAGAGAGGATTTGACATGATTTGTTGGCCTGCAGAGTTGGGATTATCTAGCAAAGTGCCCGACTGCACAAATATGAGTGGATAAGTCCAGGATGGACTCATTTTAGTAGAAGAGGGTTTTCTGTGGCTCGTTATAATTTCACTTTAGTACGTATACTGTGTTTAAGCATACACCCACGTTAATACAAATTCATACTAACACAGATGACAGCCACAGCTTTAGCATTACTTAGATTATACAGAATTTCTGTGGTAATTCACTGGTTGCTACAGGTTTGCGATCATGGTGGATAGAAGCCTCAAAGCTGCTACGTGTGGCTGTAAGGACTTTCCATGCAACAAGTTGGACCATACATGGACTCACAAATATGTTGATCACAATGCAACTGCTTAAAACTGTAAACTGAAATCCATCTGGATCTATGAGTATTTTACTTCATTACATGCATTCAGTTTTATTAAAGTTGTTTACCCTCGGA

Function

symbol description
wscd1 Predicted to enable sulfotransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: WSC domain-containing protein 1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778052.1 True 2805 mRNA 0.52 9 31243993 31265687
XM_039778053.1 False 2801 mRNA 0.52 9 31243993 31265677
XM_039778054.1 False 2640 mRNA 0.52 8 31243993 31265687

Neighbor

gene id symbol gene type direction distance location
samsn1b NA coding downstream 255416 30966631 ~ 30988577 (-)
serpinh1a LOC103370387,LOC104930320 coding downstream 333629 30903631 ~ 30910364 (-)
acer3 acer3 coding downstream 342432 30890492 ~ 30901561 (-)
LOC120543607 NA coding downstream 368233 30859601 ~ 30875760 (-)
LOC120543889 NA coding downstream 386773 30853556 ~ 30857220 (-)
bhlha9 bhlha9 coding upstream 70314 31336001 ~ 31337657 (-)
riox2 mina coding upstream 92142 31357829 ~ 31371006 (-)
hlcs hlcs,LOC102212994,LOC105419148 coding upstream 164753 31430440 ~ 31476434 (-)
ska2 NA coding upstream 243873 31509560 ~ 31528558 (-)
tiprl NA coding upstream 265970 31531657 ~ 31542171 (-)
G170154 NA non-coding downstream 99405 31143942 ~ 31144588 (-)
G170147 NA non-coding downstream 103119 31140478 ~ 31140874 (-)
G170138 NA non-coding downstream 108608 31134891 ~ 31135385 (-)
G170129 NA non-coding downstream 133785 31108042 ~ 31110208 (-)
G170106 NA non-coding downstream 221753 31021904 ~ 31022240 (-)
G170202 NA non-coding upstream 25024 31290711 ~ 31291013 (-)
G170205 NA non-coding upstream 80887 31346574 ~ 31347401 (-)
G170209 NA non-coding upstream 116522 31382209 ~ 31382491 (-)
LOC120544288 NA non-coding upstream 300681 31566368 ~ 31590013 (-)
G170332 NA non-coding upstream 479164 31744851 ~ 31745684 (-)
G170098 NA other downstream 285495 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 392939 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 413684 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 511911 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 829258 30411229 ~ 30414735 (-)
G170463 NA other upstream 936022 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1177599 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2302934 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 3043307 34308994 ~ 34309714 (-)
cblb cblb other upstream 3657686 34923373 ~ 35016119 (-)

Expression


Co-expression Network