tiprl


Basic Information

Item Value
gene id tiprl
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31531657 ~ 31542171 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778449.1
TaggaccaggagacagactgcaACAGCAGGAAACGGACACAAAGAAAGAGCGGAACGACAGCGTCAGCGTAGCAACATAACCGGACAGTTTATACCGGCGCACTCACGTAGCCTCCATGACAGGTAGCTAACTAACAGTTGACAGCATCCAAGTTGATGTTGGCCTCTCTGTCCACGATGATGTCCCATGGCTTTAAGAGCAGTAAGCAGGACTACACCTTTGGACCATGGACAGTTACTGCTGCCAGAAACCACATCATGAAATCCAAAGACATTGAACGGTTAGCGGAGGAGATGAACATGCCCTCCCTTCCAGAGATGATGTTTGGTGACAACATCCTGCGCATCCAACACACAGAAGGCTACGGCATCGAATTCAACGCCATCGACGCCCTTAAGAGAGTCAACAACATGGAGGACGCTGTCAAGGTGGCCTGTGCTCAGGAATGGCAGGAGAGCAGAGCTGACTCTGAACATTCCAAGGAGGTGGTGAGACCTTACGACTGGACATACACTACAGACTACAAAGGCACTCTTATAGGAGAAAGTATGCAGCTGCAGGTGGTGAAGACGGCGGAGCGTATCGACATGGAGAAGCTCAAGGCTCGGGAACAGATCATGTTCTTCGACGAGGTGCTGCTGTTCGAGGACGAGCTGCACGACCACGGCGTCTCGATGATCAGCGCCAAAATTAGGGTGATGCCCACCAGTTTCTTCTTGTTGCTGCGTTTCTTCCTACGAGTGGACGGAGTGCTGATCAGAATAAATGACACACGACTGTATCACGAGGCTGGGAAGAACTTCATGCTACGAGAGTTCAGCACGAGAGAAAGCCAGATAGCAGAACTGAAGAATGTTCCTGCTGCACTGTACACAGAACCCAATGACATCGCCCAGCACCTAACGCTGAAGCTGACAGAGTGTGAGAGGCTGGAGCTCCCTGGGATGCAGCCTGGGAGCGCTGTCAATGACGTCCTTCCGTGACCAGTATACTAAGAGGTCCACAGTGATGTGTTGCATGATGAAAAAAACGGGAATAGTAGTCCAGAAGCACATCCTTAATCTTACAGTATCATAACAACCATTGATCTTCCCTGAAGTATCTGTACAGGAATAGTTTTTATATGTGACCACTATGATGGTGTGTTCTTAAAACTCAAACGCAACCTGACTTTAGACAGTTTGTAATATCATAGAAACTTTAACCCCCCCCGGTTAAATACTTCGGTCAAGCTTCTGGCTCTGTTCATATTTGAACTGATTTTGTTTTatgagacattttttttcactctcAAAATTGATCGCCCTTTTGACATAAAAGACTTATTAGTAGGTAGGGTAGCTGCTTCCACGCTTGTAATATTAGTATGTCGCTAatgtgtttgtaaaaaaaaacaaaaaaaaaacgcaaccGCTACACAAAACGGCACTGTATTTTCTGAAGTCATCAAGAATTTCTGTAAATATGTCTACTGTATTTTCTACGGTGACTTACGGACGGTGAAAAagcttgtttttccatttgtgAATATATCTTCGATATGGCCAAATAAATTCTGTTTGTGCAAATGTAGCTAACTGC
>XM_039778450.1
CAGCATCCAAGGTAAACAGATTTTTCTTTCTGTTAATGTTCGTTATAACACCCAGTTGTAGTGACTGCGAGTTTTCTGGTCATGGACGGCCGTCTTTAAGGTTCAACCGCCACGACAGAGTGCTCTCTGAAGCAGTTGATGTTGGCCTCTCTGTCCACGATGATGTCCCATGGCTTTAAGAGCAGTAAGCAGGACTACACCTTTGGACCATGGACAGTTACTGCTGCCAGAAACCACATCATGAAATCCAAAGACATTGAACGGTTAGCGGAGGAGATGAACATGCCCTCCCTTCCAGAGATGATGTTTGGTGACAACATCCTGCGCATCCAACACACAGAAGGCTACGGCATCGAATTCAACGCCATCGACGCCCTTAAGAGAGTCAACAACATGGAGGACGCTGTCAAGGTGGCCTGTGCTCAGGAATGGCAGGAGAGCAGAGCTGACTCTGAACATTCCAAGGAGGTGGTGAGACCTTACGACTGGACATACACTACAGACTACAAAGGCACTCTTATAGGAGAAAGTATGCAGCTGCAGGTGGTGAAGACGGCGGAGCGTATCGACATGGAGAAGCTCAAGGCTCGGGAACAGATCATGTTCTTCGACGAGGTGCTGCTGTTCGAGGACGAGCTGCACGACCACGGCGTCTCGATGATCAGCGCCAAAATTAGGGTGATGCCCACCAGTTTCTTCTTGTTGCTGCGTTTCTTCCTACGAGTGGACGGAGTGCTGATCAGAATAAATGACACACGACTGTATCACGAGGCTGGGAAGAACTTCATGCTACGAGAGTTCAGCACGAGAGAAAGCCAGATAGCAGAACTGAAGAATGTTCCTGCTGCACTGTACACAGAACCCAATGACATCGCCCAGCACCTAACGCTGAAGCTGACAGAGTGTGAGAGGCTGGAGCTCCCTGGGATGCAGCCTGGGAGCGCTGTCAATGACGTCCTTCCGTGACCAGTATACTAAGAGGTCCACAGTGATGTGTTGCATGATGAAAAAAACGGGAATAGTAGTCCAGAAGCACATCCTTAATCTTACAGTATCATAACAACCATTGATCTTCCCTGAAGTATCTGTACAGGAATAGTTTTTATATGTGACCACTATGATGGTGTGTTCTTAAAACTCAAACGCAACCTGACTTTAGACAGTTTGTAATATCATAGAAACTTTAACCCCCCCCGGTTAAATACTTCGGTCAAGCTTCTGGCTCTGTTCATATTTGAACTGATTTTGTTTTatgagacattttttttcactctcAAAATTGATCGCCCTTTTGACATAAAAGACTTATTAGTAGGTAGGGTAGCTGCTTCCACGCTTGTAATATTAGTATGTCGCTAatgtgtttgtaaaaaaaaacaaaaaaaaaacgcaaccGCTACACAAAACGGCACTGTATTTTCTGAAGTCATCAAGAATTTCTGTAAATATGTCTACTGTATTTTCTACGGTGACTTACGGACGGTGAAAAagcttgtttttccatttgtgAATATATCTTCGATATGGCCAAATAAATTCTGTTTGTGCAAATGTAGCTAACTGC
>XM_039778451.1
CGGTGTTTaggaccaggagacagactgcaACAGCAGGAAACGGACACAAAGAAAGAGCGGAACGACAGCGTCAGCGTAGCAACATAACCGGACAGTTTATACCGGCGCACTCACGTAGCCTCCATGACAGTTGATGTTGGCCTCTCTGTCCACGATGATGTCCCATGGCTTTAAGAGCAGTAAGCAGGACTACACCTTTGGACCATGGACAGTTACTGCTGCCAGAAACCACATCATGAAATCCAAAGACATTGAACGGTTAGCGGAGGAGATGAACATGCCCTCCCTTCCAGAGATGATGTTTGGTGACAACATCCTGCGCATCCAACACACAGAAGGCTACGGCATCGAATTCAACGCCATCGACGCCCTTAAGAGAGTCAACAACATGGAGGACGCTGTCAAGGTGGCCTGTGCTCAGGAATGGCAGGAGAGCAGAGCTGACTCTGAACATTCCAAGGAGGTGGTGAGACCTTACGACTGGACATACACTACAGACTACAAAGGCACTCTTATAGGAGAAAGTATGCAGCTGCAGGTGGTGAAGACGGCGGAGCGTATCGACATGGAGAAGCTCAAGGCTCGGGAACAGATCATGTTCTTCGACGAGGTGCTGCTGTTCGAGGACGAGCTGCACGACCACGGCGTCTCGATGATCAGCGCCAAAATTAGGGTGATGCCCACCAGTTTCTTCTTGTTGCTGCGTTTCTTCCTACGAGTGGACGGAGTGCTGATCAGAATAAATGACACACGACTGTATCACGAGGCTGGGAAGAACTTCATGCTACGAGAGTTCAGCACGAGAGAAAGCCAGATAGCAGAACTGAAGAATGTTCCTGCTGCACTGTACACAGAACCCAATGACATCGCCCAGCACCTAACGCTGAAGCTGACAGAGTGTGAGAGGCTGGAGCTCCCTGGGATGCAGCCTGGGAGCGCTGTCAATGACGTCCTTCCGTGACCAGTATACTAAGAGGTCCACAGTGATGTGTTGCATGATGAAAAAAACGGGAATAGTAGTCCAGAAGCACATCCTTAATCTTACAGTATCATAACAACCATTGATCTTCCCTGAAGTATCTGTACAGGAATAGTTTTTATATGTGACCACTATGATGGTGTGTTCTTAAAACTCAAACGCAACCTGACTTTAGACAGTTTGTAATATCATAGAAACTTTAACCCCCCCCGGTTAAATACTTCGGTCAAGCTTCTGGCTCTGTTCATATTTGAACTGATTTTGTTTTatgagacattttttttcactctcAAAATTGATCGCCCTTTTGACATAAAAGACTTATTAGTAGGTAGGGTAGCTGCTTCCACGCTTGTAATATTAGTATGTCGCTAatgtgtttgtaaaaaaaaacaaaaaaaaaacgcaaccGCTACACAAAACGGCACTGTATTTTCTGAAGTCATCAAGAATTTCTGTAAATATGTCTACTGTATTTTCTACGGTGACTTACGGACGGTGAAAAagcttgtttttccatttgtgAATATATCTTCGATATGGCCAAATAAATTCTGTTTGTGCAAATGTAGCTAACTGC

Function

NR:

description
TIP41-like protein isoform X1

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0009790 embryo development biological_process

KEGG:

id description
K17607 TIPRL, TIP41; type 2A phosphatase activator TIP41

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778449.1 True 1582 mRNA 0.46 8 31531657 31542164
XM_039778450.1 False 1564 mRNA 0.45 8 31531657 31542022
XM_039778451.1 False 1559 mRNA 0.46 8 31531657 31542171

Neighbor

gene id symbol gene type direction distance location
ska2 NA coding downstream 3099 31509560 ~ 31528558 (-)
hlcs hlcs,LOC102212994,LOC105419148 coding downstream 55223 31430440 ~ 31476434 (-)
riox2 mina coding downstream 160651 31357829 ~ 31371006 (-)
bhlha9 bhlha9 coding downstream 194000 31336001 ~ 31337657 (-)
wscd1b wscd1 coding downstream 265970 31243993 ~ 31265687 (-)
LOC120543743 irf2bp1 coding upstream 69604 31611775 ~ 31616648 (-)
hnrnpl LOC102310682,LOC102197207,LOC103368863 coding upstream 77536 31619707 ~ 31633080 (-)
slc8a2a LOC106917460,LOC103141039 coding upstream 92765 31634936 ~ 31669195 (-)
nccrp1 NA coding upstream 129008 31671179 ~ 31680058 (-)
mark4a mark4,LOC101472647,LOC102194939,LOC100708718,LOC107386318 coding upstream 162838 31705009 ~ 31742252 (-)
G170209 NA non-coding downstream 149166 31382209 ~ 31382491 (-)
G170205 NA non-coding downstream 184256 31346574 ~ 31347401 (-)
G170202 NA non-coding downstream 240644 31290711 ~ 31291013 (-)
G170154 NA non-coding downstream 387069 31143942 ~ 31144588 (-)
G170147 NA non-coding downstream 390783 31140478 ~ 31140874 (-)
LOC120544288 NA non-coding upstream 24197 31566368 ~ 31590013 (-)
G170332 NA non-coding upstream 202680 31744851 ~ 31745684 (-)
G170424 NA non-coding upstream 357915 31900086 ~ 31901144 (-)
G170425 LOC103357888 non-coding upstream 359841 31902012 ~ 31906986 (-)
G170432 NA non-coding upstream 421429 31963600 ~ 32000128 (-)
G170098 NA other downstream 573159 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 680603 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 701348 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 799575 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 1116922 30411229 ~ 30414735 (-)
G170463 NA other upstream 659538 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 901115 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2026450 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 2766823 34308994 ~ 34309714 (-)
cblb cblb other upstream 3381202 34923373 ~ 35016119 (-)

Expression


Co-expression Network