LOC120543548


Basic Information

Item Value
gene id LOC120543548
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 37698408 ~ 37699562 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636362.1
tctgctccaacccctcccatctgagagtgctggacctgagctacaatcatccaggagactcagGAACATAATAGGAGAAGAAGATATTCATCTTGACCGGACAAGCGGTCGATACATCCCGGCTGCTGCCCGGTGTCCTGTCCTGGAAATGTCTCTGGAGAAAAGGAACATTGTTCATGGCGGCGAGCTGAAGGAGAGCTGCACCAAGGTAGCCACAGTTAGCCACACTGGCTGGACTGGAAACAGGGAAgttaccttcaaaataaaagagcaACACAAAGGGTGAGTAAGGTTTATAAATACTCACAATGGACAGGGCCGTCCAAACCCAGTTTACTATGCAAGAGTTTGGTACAGATACATTTCCATGACATGAATTCAAGTTACTTTTCATTCACGTTAactgattaaaataaataatctaaatagttgctgattaatgTTCTATGTATTAActaataggggtgggaatcacctcACTATATGACTGATGTCACGATACGATGTTATTGCggttttaaacatattgcaatatccTGCAATTTATtacaatttattacctttttttccaacttcaaattttttcgAATTTCAAATGATGCCCCCAAAatgaaactttgtcaacatctgttttatctaaaaagatacatttctctgtttcttCTCACTTAAATTTTATTGCTACAAAatgtgattgtcaagcagacaaactgaccaacagatatataataatagatcaatATTCAGTGTCTATGTATTGATACAGTATCGCCACTAAAAATATCGCAATACTTTgatgtattgattttttccccGACCCCTGATAActagttgtttgtgttttttgaccATCAAAAGAGTAGATGTTTTATTCTATGTATATCAAAAACGACTGCCTGCTGAAATAGCACTGCACCTGACGTGAAGACGCAGCAATACAGTTTTAATTTCACCAAATCCACTTGTCTGTGTAAAGATATTtgtcaataaataataataaatttgtGAATTTCGGCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636362.1 True 1020 lncRNA 0.37 2 37698408 37699562

Neighbor

gene id symbol gene type direction distance location
LOC120543545 NA coding upstream 1014 37697016 ~ 37697394 (+)
LOC120543587 NA coding upstream 2776 37678601 ~ 37695632 (+)
LOC120575584 NA coding upstream 474999 37187809 ~ 37223409 (+)
LOC120543623 NA coding upstream 1292018 36404414 ~ 36406390 (+)
LOC120575649 NA coding upstream 1372770 36316843 ~ 36325638 (+)
LOC120543626 NA coding downstream 14232 37713794 ~ 37715491 (+)
LOC120544520 NA non-coding upstream 2407 37695667 ~ 37696001 (+)
G171558 NA non-coding upstream 26890 37671253 ~ 37671518 (+)
G171490 NA non-coding upstream 49832 37583967 ~ 37648576 (+)
G171482 NA non-coding upstream 89563 37551704 ~ 37608845 (+)
LOC120544402 NA non-coding downstream 20280 37719842 ~ 37721116 (+)
G171468 NA other upstream 28809 37543600 ~ 37669599 (+)
G171483 NA other upstream 81747 37606030 ~ 37616661 (+)
G171409 NA other upstream 436072 37261916 ~ 37262336 (+)
LOC120575668 NA other upstream 2374156 35322260 ~ 35324252 (+)
LOC120575607 NA other upstream 2610511 35083889 ~ 35087897 (+)
G171572 NA other downstream 5121 37704683 ~ 37707766 (+)

Expression


Co-expression Network