LOC120544502


Basic Information

Item Value
gene id LOC120544502
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 36954669 ~ 36956821 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636509.1
aataaataaaacttaattCACAGATCTCCCCTATGCTGCTAGATAATGGAATGCaattatatcagaaatatatatCCTATGATTTACTTTCCCCCTCGCATTTTTCATGGACTGCAGAGGAAATGTCTCgtattttttaaaacttcaagATGCTTTGGCGCTGCGTTATCTGCCTCGTTTTCCTCACTTTTTCACTGAAACAGTTATTGAGCCATATTAATCGAATGCACAGCCGTAGCCCTGATTTCAGGTTGCTCTGTGGTATTGACGGATGCACTGAGGAATATCGAGTGTATAACTCATTCTATCATCATGTGAAAAGAAGACACTCTCAACACCTTATTGAAAGCAACAGACCAGGCGATGGCAACCATGTAGGTGAACAGCCACAGGAGGAGAGTCAAGGAACACACCAGCAACAAGACAACATTCAACTCAACTTCCAGGGGACTCTAGTATCACCAATCAACAGCTCTGTACACCTGATACAGATGAAGGGCAAATGGACATTAACCAAGATGGAGCTGCCACAGTACAACCAGATCTGACAACACGCCTTTGTCATAAATGCCCGAGCCAAACATCGTCTCTCACAGaaagGCATGAATGACATTGTTGCTGGAGTGCAGCAGTATCAGTCATCATTGTTGGACAACCTCAGGGGGCAGATGAAGCAAGTACTAAAGAATCATTCAGGAAGCACATCAGGACACCTTCAAAAAGAAGTAATGGGCATATTTGATAATTTTATTGACCCTTTTGCAAGTGTTGCAACAATATTTCAACAGAACAGTGTTATTAAGAAGCAGTTCAGTGTTGTGGATGCAGAAGAAATTTCAATTGCTCGAAGCATATGCAGGACGAAACGTGGAGGATCTAAAGACTTTTTCATCAAAGACAAAGCATTTCATTATGTACCATTAGTCAAAAGTCTAGAACAGTTCTTATCACATCCAAGGATATCTGATATATGATTGACAAGGGACCACAGAGGTGCAGAGAAGGTTTTTTTGTGAACATTGTTGATGGCACCCTTCTACAATCACATCCCTTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636509.1 True 1056 lncRNA 0.41 4 36954669 36956821

Neighbor

gene id symbol gene type direction distance location
LOC120543623 NA coding upstream 548279 36404414 ~ 36406390 (+)
LOC120575649 NA coding upstream 629031 36316843 ~ 36325638 (+)
LOC120575655 NA coding upstream 982876 35968403 ~ 35971793 (+)
LOC120543618 NA coding upstream 1177044 35775979 ~ 35777625 (+)
LOC120543616 NA coding upstream 1251585 35700064 ~ 35703084 (+)
LOC120575584 NA coding downstream 230988 37187809 ~ 37223409 (+)
LOC120543587 NA coding downstream 721780 37678601 ~ 37695632 (+)
LOC120543545 NA coding downstream 740195 37697016 ~ 37697394 (+)
LOC120543626 NA coding downstream 756973 37713794 ~ 37715491 (+)
LOC120544361 NA non-coding upstream 44586 36907954 ~ 36910083 (+)
G171310 NA non-coding upstream 97927 36856417 ~ 36856742 (+)
LOC120543550 NA non-coding upstream 114504 36837190 ~ 36840165 (+)
G171284 NA non-coding upstream 142207 36812213 ~ 36812462 (+)
G171248 NA non-coding upstream 538864 36415345 ~ 36415805 (+)
G171376 NA non-coding downstream 137245 37094066 ~ 37094386 (+)
G171378 NA non-coding downstream 145604 37102425 ~ 37102684 (+)
LOC120544372 NA non-coding downstream 228132 37184953 ~ 37186028 (+)
LOC120544374 NA non-coding downstream 301250 37258071 ~ 37259380 (+)
G171416 NA non-coding downstream 318513 37275334 ~ 37275666 (+)
LOC120575668 NA other upstream 1630417 35322260 ~ 35324252 (+)
LOC120575607 NA other upstream 1866772 35083889 ~ 35087897 (+)
G170896 NA other upstream 1914298 35039942 ~ 35040371 (+)
G170775 dlg2 other upstream 2512519 34436960 ~ 34442150 (+)
G170735 hyou1 other upstream 2618321 34332414 ~ 34336348 (+)
G171409 NA other downstream 305095 37261916 ~ 37262336 (+)
G171468 NA other downstream 586779 37543600 ~ 37669599 (+)
G171483 NA other downstream 649209 37606030 ~ 37616661 (+)
G171572 NA other downstream 747862 37704683 ~ 37707766 (+)

Expression


Co-expression Network