G177586


Basic Information

Item Value
gene id G177586
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 24684059 ~ 24686802 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU240402
GCAAGTTTGTTTAATTCACGAATTGATAAACAGGATCAGTATTCACATCAcaacacacattatacacataTCCCTTACAGCAAAATATGCACTCAAGTCTTGGATGCACGTCACTGCAATGAAATAAAACTGGATGGATGGTTGTGGACAAGGCAAGGAGTTTTATTTTACATCTTATTAAAACTATAGTGTAGGAAGTGTGTAGTGTCTAACTGTAGCATACTgctggtgtgtatgtgtagtgtTTAATCACTTGTGAACGATGGTTGTGCATGTTTAAAATGCTACACAAATGCTTTTCCATCTGCTCAAATGACATCCTAATTTCATAGTCATGCTTATGCTAGGTCCCATACATCTATGATCTATTCATAAACTACTTTGTATCTGTTCACGGTGCATTGTTAAGTATGATACCTGAGAACTGGTGGTAATTTGTGAATAATCCACTCAGTCACTGACCAGCCAGTAATAGATTTAGGATAGAAACAGCTGTAAGAGGTACGTATAAACAATTATTCCCAAAGTTCCTTTTTACACAACAGAGGCAaggcaacaaaacacaaacacaaatcgTACATTGCTGAACGCTGCATACCTCATTTGAGTGACAAAAGGCAAACCATGGCTCTGGTGATTGTGTGAGATACAGACTAAATCTTCCCTGAATCAAGACACTACTCCCTCATTGAATTTGTAATGGATTTTGGTAGAGTGTACTAATTAAGACTCATAATAAACACAGCAGATATTCAGTAACATATTCTAAAACGTTGTTTTACATGTTttcaaaaaggagaaaaaataaGCACAGTTTTCCAATTCATAATGTACCACAAAATCTGCAGCCACGACACAGCTACCGGCTGCTTGATCATGAGGAACCATACATACGTACACAAGCTGACACATGCACTGAAAGCTGTTCCTAAAAATTCCCTCTATACCGGAGTCCATGCTACCAAAAGTTTAGTGCAGGAATTCCCCAGCTGAGCTTAAACCAACTGAACAAATAATATATGAAAGAATACCTTGTTTATCTTTGGGTATACCAGGTACATTCCCCAATGTTAAACATATCTCTAATGCCtatgtatattttaaaatgcattcaGGCTGTTTCGTCTGCACAGTGGGTAGAATACTGTAATACCAAAATCCCTCCCATTTTCTTTACTCAAAAGTAGTCCAGTGAAGGTACATTTTGGGACTCAgaggaaaaactttttttttttcaataaatattACAATAAAGTTTAATAAGACCCCCATTATAAATTAAAGTAGAACTTTTGTAGCACAAGTTTTCACTGATAACTAAGTTGACTTGTATCATCTACATTCACTGCTTAAAGTAGGTTCTTCGGATTAAATGCAGAGTTAACGCAACAGGCTTTGGAAACCCCACTGGCCAATACTTTCCGATGATAATAAGGTTAGAGCTGCAAAAGAGCGGATATCGATATTTGGGTTTGCTGCTAAAACAAGTCTGAACCCCACGTTACCATTGGACTTATCTTTACCCACTTCATTCTCCAAGTGAGACACATTTGAATCAGCCTCAAAGTCATAGTGAATAACCTGATAACCTTAAGTTAATTATGTACATTTTACATTCACATTAATTTAGTTTAAGGATTTCCTGAAATGTTCTTGGGCTAGAAAGGTGTACCTCACATTTTTCGTGCAGAAAACGGGTTtacaactgacagcagcaacaaacaacaaaaggggaaaaaaatttaaaaataaatacaacccATGAGAAGACCATAAACCATGAAAAGCAAAACATACCATCTATGGTATCGAGTCACAATGAGAGATCCCATTTACACACCAAGTACCAAGTAATGGACTTAATCCAACGCCAATCCGTTTGGATACTATTAGGTCAGGACAACAAGAATGCAGCAgtgtaagtaaataagtaaactCAGTACCATAATTATGTAGTGACAGAAAtgggaaagaggaaagaagcaTGGAGGAAGAGGTAGGATGGATGGAGGGCGGTAACAACTGAAGAAAATAGAGGAAGAGGGTGGAAAGGCAGATGCCTTACTCCGGAGCCCCATTTGCCGTTTCTGTCATCTTCTCTTCATCTGCCTGTTTCTGATGCTGCAGTCTGGCATAAGTCACTGCGTCtcccCTTTTTGCCTAAAGAGGCGAGGCCGTACAGAACTCCTGTAGCGAAGGCGATGGCATTTCCAAACAAGGTTGTAAAAGAGAAACTCAAGAATACAGGAAACAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240402 True 2255 lncRNA 0.38 2 24684059 24686802

Neighbor

gene id symbol gene type direction distance location
ptges ptges coding upstream 152100 24528667 ~ 24531959 (+)
usp20 usp20 coding upstream 168453 24500231 ~ 24515606 (+)
LOC120544878 surf1 coding upstream 190633 24488189 ~ 24493426 (+)
st6galnac6 st6galnac6 coding upstream 221582 24456039 ~ 24462477 (+)
st6galnac4 st6galnac4,LOC100701389 coding upstream 231742 24443511 ~ 24452317 (+)
ptger4b ptger4,LOC104959373 coding downstream 71868 24758670 ~ 24762888 (+)
fibcd1b fibcd1,LOC103369860,LOC102776889 coding downstream 366715 25053517 ~ 25185135 (+)
LOC120545226 dab2ip,LOC102777858 coding downstream 589727 25276529 ~ 25433004 (+)
agpat2 agpat2,LOC103360602,LOC103390057 coding downstream 1220423 25907225 ~ 25928139 (+)
LOC120545451 NA coding downstream 1282654 25969456 ~ 25972785 (+)
G177578 NA non-coding upstream 78548 24605015 ~ 24605511 (+)
LOC120544882 NA non-coding upstream 157742 24522927 ~ 24526317 (+)
G177499 NA non-coding upstream 258520 24424040 ~ 24425539 (+)
G177494 NA non-coding upstream 278522 24405280 ~ 24405537 (+)
G177493 NA non-coding upstream 279007 24404620 ~ 24405052 (+)
G177608 aif1l,LOC102776310,LOC102215481 non-coding downstream 113315 24800117 ~ 24807619 (+)
G177643 NA non-coding downstream 313001 24999803 ~ 25000041 (+)
G177645 NA non-coding downstream 500878 25187680 ~ 25188631 (+)
G177651 NA non-coding downstream 517453 25204255 ~ 25204487 (+)
G177681 NA non-coding downstream 822517 25509319 ~ 25512952 (+)
dnlz dnlz,LOC104941974 other upstream 526438 24155385 ~ 24157621 (+)
rpl37 rpl37 other upstream 956817 23723478 ~ 23727242 (+)
LOC120546141 NA other upstream 958007 23725974 ~ 23726052 (+)
LOC120546142 NA other upstream 959814 23724166 ~ 23724245 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 1225454 23440983 ~ 23458605 (+)
G177596 map1b other downstream 16169 24702971 ~ 24711641 (+)
zgc:63972 cuta,LOC103373665 other downstream 558760 25245562 ~ 25305032 (+)
G177715 NA other downstream 846330 25533132 ~ 25533689 (+)
G177759 NA other downstream 1142916 25829718 ~ 25849122 (+)
G177809 hexb,LOC102784651 other downstream 1331362 26018164 ~ 26021831 (+)

Expression


Co-expression Network