zgc:63972 (cuta,LOC103373665)


Basic Information

Item Value
gene id zgc:63972
gene name cuta,LOC103373665
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 25245562 ~ 25305032 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU240496
TTTATCTCTGCCTTTGACCGTCCGACCTAAAGTACCTGTCAACGCAATGCGCTTCTTCTGTAAAGGTAATGAGTTTTCTGAATGTTTTTCTCTCGCGAAGCAGCTGTTTAACCGGTGCTGAAATGCTTATTAAAAATGACGGAACACTAATCATCCCCGGAGAAAGTCTTAGCGGTTTTATGAACGAAGTGTGTCCCTCTTTTATTATCTGCACCAGCCGGCCGGACTTTGGGAATGACATTTGTTGCCACTGGCAGGATGGAGTGGCTGTTCCAGCGGTGCCCTAAAGAGGctgtcttcctctctgtctgtcggtcGATGCTGCTCATTTCATGTTTGCTCTTGGTCCTGTCCGTGTCCATGTATCCTGGGTTGCAGTCCATTGGGGTCCAGCTTCATTCAGCCATCACAGGGAGTTATGTACCAGGCCACCACTCTGTTCTTCTCATCAACAGTCCCAACAAACAGGCAGCCAAGGACATTGGCAGggcGATCATGGAGAGGCGGCTGGCAGCCAGCATTAACATTCTCTCCAGGACCTCTACAATGTACTATTGGAACGGTGAAATCCAGGATGCAAGTGAAGTTCTGATGGTCTGTCCACCCCTATGAAAACCCAGAAGTACtcagcttcccggtggaggacGGCAGTCTGGCTTACATGAAGTGGATGGATGAAGCCATTCCGGACGACTGATACATCATAAAAATCGGAGCCAATCTCTGCATGGACTGCAGCCGAACAGGGAAACTCAGCCATGCATGCAGGCGGTTAAAGGCTTCGGATCGAACGGTTCAGAAAGCACTCTATTGAACAAAAGTTCAGTATGTGACATTTATGCTATTTTGTGGCTCTGACCTTTTCATTGTAAATTCCACCATGTACTGTGGAGATTTTATTTCAGTCCTTTAAAAGACGTTTTTTTAGCACAGTCATAAAAATACTTGCTTCTGATTGATTAGCAAGTGTCAGCTTACATTACATAACAGTCCCAGTTGACCAGTcagttttaaagctatagtgggtagtttctgtcgcccctgTGAGGAATtccaagtaatgacaacaccactgttgttgcatccacatgacacaagccttccatAATCGCGCCCCCCCCCCAAccccccccccccccc
>TU240497
TTTATCTCTGCCTTTGACCGTCCGACCTAAAGTACCTGTCAACGCAATGCGCTTCTTCTGTAAAGGTAATGAGTTTTCTGAATGTTTTTCTCTCGCGAAGCAGCTGTTTAACCGGTGCTGAAATGCTTATTAAAAATGACGGAACACTAATCATCCCCGGAGAAAGTCTTAGCGGTTTTATGAACGAAGTGTGTCCCTCTTTTATTATCTGCACCAGCCGGCCGGACTTTGGGAATGACATTTGTTGCCACTGGCAGGATGGAGTGGCTGTTCCAGCGGTGCCCTAAAGAGGctgtcttcctctctgtctgtcggtcGATGCTGCTCATTTCATGTTTGGTAAGAGCCACTGTGATGATTCCATACGCTTCTTATGATCATTTCTCATTTGAAAACTTTGAGAAAAGTCCTAAGTAATCCGTAACAAGAAGGCTTCGCCGTCGGGAAACGCTAAATTGTTATTAATTGCGTTTGTTCTCTAACATATTTGTGTTAGGATTTACATGCAGTCTATGTCTGGCTGTGATGCCGTTGCTGTGCAGAGAAGTAGGACAGATTATAAATTGGTCACTGCGTCCAAGCCGAGGCCTATATACTCATTTATCTGTGACAGACAGCGCCAAATAATAAGAGGATAAATACtgaatccaatccaatccaaacATGCAATCCTTTCAGAGCACAGTAGATAATTAAATTGAGTTATAACTTTGTCTCATCCAAACATAAAACAGCAAGAAACAGCCAAATGTCCAAATAATTTATGTCAGACACAAAACATCATCCCGGGATGCCACAACCATGCATCTTAAAGCCTGTTAGGTAACTCTGACATTTCAACCATTTGAGATGTCCCTTATTgcatccacccacccacaccaCACCCAACCCCTGTATAGCTCTTGGTCCTGTCCGTGTCCATGTATCCTGGGTTGCAGTCCATTGGGGTCCAGCTTCATTCAGCCATCACAGGGAGTTATGTACCAGGCCACCACTCTGTTCTTCTCATCAACAGTCCCAACAAACAGGCAGCCAAGGACATTGGCAGggcGATCATGGAGAGGCGGattgaatgagaaggtgtgtccaaacttttggcctgtactgtattaatCTGTAGGTAACTATAACAGCACTTTGTGCTATGTCTCAGTTAACTCTACTTGGTTAAACTGACCTACAGTAACATGGCTGAAACTGACCACAAACAAGCTTTTAAAATTGGATGACAATTTAAACAGCCTGTGGAAAGTAACCATAGAATAAGTGAGATATTAAATTTAATGTATTCTTGCTTATACATTGCTGCACCTCTTTTACAAATAACACTATCCTCTAATGGCAGTAATCTTTGAGGATTTGCATTTGATGAAAATGCCCTCTAgtcctagcctggttgacaccagaccctcctcagttgtaactgagagtgggtctggggaaggttcactcacagctcatttccaaaggggcgtcaccactCAAATGCGTCTGGGCgtaattggatagtccttcaaccaatcagaccaaagatccggttgacgtagcagcgacagcggcatcaatgggttgctgcgcttcggtggcaatgttcggtggccgtcatgttgaatgtaaacaaaaagctgctcgccgtcgcttcgctatcgtcatcgtgtaaagcccgcctctacggttgtgattggtgcctcgatttggaaaaattggaaatgggcttgaatgggctcttggccagactgacttgcagagcaaatcttaaatttgccggaagttcgtcagggtttccCAGGCTACTCTAGTTCTGCTTTTTATGCGTTATGTTTTCGGTTCGGTTTgtccttttgtttttctgtcagaAAGCTATTGGCCTGATTTTAATGAAACTAAgtagaagggtgtagcatgggccaagcaagaacccattacatttggGAGTGGATCTGAATCACGTAGctgatacacaaattatttttcaatttgGTTAACTTTGACTTCCAAACTGCGAacattcacactgcattaacattgtgaaataGGTCAGATGTCCGCGTTCTCTGAATGCCCTTCtagttatttatgtatttattaagtTGACATCACTCTTGTCGGCGGCCATTAAGTTCTGCCTTTAAGGTAGGTTTAACGTAGTTTATGCTGGAACATATTGATGGCATGACTTATACTATACTGATAATAACTATAGTTATTGTAATTCCTATTAGCATAGACATGTTTTGCCTGTTATTGGACATAACATTGCCCATACTATAACATTACTTTATActagttattgttattaatttgaaagtaaaaaatgtTCTAAAGCTTTTCACTAAAACGTTAAAGCCTTCCAAAAGAGAGAAACCTGAGCAGCAACACTCAGACAGGACATCAAAGCAATCTACCTACGGTTCACTGGATTATTGAtctgtgtgaaaccaaaaccgTTTGCCTTTAGTACTGTATTTACAAGTAAAAAAGGCAACACTGCTGAATTTCAGTACTCCTTTGCTCCCGGTTAGCTCAGTTTGAACTACTGAAACATTCACTACCACCTTGTATAACCTCAAACAGAGCTACACCGTACTACGGAGGGTAAATTAACGAACCGTTATGACTGACAGCTCTCTGCATTATTGCCTACTTGAGCCCGTCTCTCCTTTGTATTTCTAACAACtaattataaaatgttttcattgttttgtttgcaTCGTGAAGTAACTGATGCTGTTCCGAGCAGGTCTCGTTTGGATAACGCATCCTCGTTCTCGATGGGTGCCACAGGAGTAGTCTTGCCAAATAAAACTTAAATtgaatcacaaaaacaaactaattTGGTCATCAGCTCTCAGCTATAGTTGCTCATCTTGAGAGCATCACAGGTCTTGTTATCTGGATTCCTGCTTCCACAAAAATTCATTGGAGATATGGTACATGGCCGCAGAGGTTTAATTAATTACATTTCAAAAAAGaactttattaatattctgAATTACAACAAATTCGGTTTTACCATGCCATATTTGCGGTTATACAGGTTAGCCATGCATGCTTACCTCGTTAGACAAAGATACGCACTCAGTCTGCAGAAAGTGTTTCCGGCATGAGGCCCTAACAAAAGAACTGCAGACACGGTTTAGTCAGTGTTGTGTCTGTGGGCCAAAATAATCCTCCCCATCAGGTCCGGAGATCAGGCCGTttagtggctgtgtgtgtgtgtgtgt
>XM_039780874.1
ACCAATTGAACGGCGCGGAGATTTATCTCTGCCTTTGACCGTCCGACCTAAAGTACCTGTCAACGCAATGCGCTTCTTCTGTAAAGCCGGCCGGACTTTGGGAATGACATTTGTTGCCACTGGCAGGATGGAGTGGCTGTTCCAGCGGTGCCCTAAAGAGGctgtcttcctctctgtctgtcggtcGATGCTGCTCATTTCATGTTTGCTCTTGGTCCTGTCCGTGTCCATGTATCCTGGGTTGCAGTCCATTGGGGTCCAGCTTCATTCAGCCATCACAGGGAGTTATGTACCAGGCCACCACTCTGTTCTTCTCATCAACAGTCCCAACAAACAGGCAGCCAAGGACATTGGCAGggcGATCATGGAGAGGCGGCTGGCAGCCAGCATTAACATTCTCTCCAGGACCTCTACAATGTACTATTGGAACGGTGAAATCCAGGATGCAAGTGAAGTTCTGATGCTGGTGAAAACAAAGACCTCCAGGATCCAGGAAGTCATAGAATATGTGAGGTCTGTCCACCCCTATGAAAACCCAGAAGTACtcagcttcccggtggaggacGGCAGTCTGGCTTACATGAAGTGGATGGATGAAGCCATTCCGGACGACTGATACATCATAAAAATCGGAGCCAATCTCTGCATGGACTGCAGCCGAACAGGGAAACTCAGCCATGCATGCAGGCGGTTAAAGGCTTCGGATCGAACGGTTCAGAAAGCACTCTATTGAACAAAAGTTCAGTATGTGACATTTATGCTATTTTGTGGCTCTGACCTTTTCATTGTAAATTCCACCATGTACTGTGGAGATTTTATTTCAGTCCTTTAAAAGACGTTTTTTTAGCACAGTCATAAAAATACTTGCTTCTGA

Function

symbol description
cuta Enables enzyme binding activity. Involved in protein localization. Located in membrane.

NR:

description
protein CutA homolog isoform X1

GO:

id name namespace
GO:0010038 response to metal ion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240496 False 1140 TUCP 0.48 6 25245583 25305032
TU240497 True 3224 lncRNA 0.42 3 25245583 25257437
XM_039780874.1 False 874 mRNA 0.48 7 25245562 25254334

Neighbor

gene id symbol gene type direction distance location
fibcd1b fibcd1,LOC103369860,LOC102776889 coding upstream 60427 25053517 ~ 25185135 (+)
ptger4b ptger4,LOC104959373 coding upstream 482674 24758670 ~ 24762888 (+)
ptges ptges coding upstream 713603 24528667 ~ 24531959 (+)
usp20 usp20 coding upstream 729956 24500231 ~ 24515606 (+)
LOC120544878 surf1 coding upstream 752136 24488189 ~ 24493426 (+)
agpat2 agpat2,LOC103360602,LOC103390057 coding downstream 602193 25907225 ~ 25928139 (+)
LOC120545451 NA coding downstream 664424 25969456 ~ 25972785 (+)
LOC120545450 NA coding downstream 677638 25982670 ~ 25986678 (+)
LOC120545449 LOC104943206,LOC100700751,LOC102783804,LOC103374055,LOC102290254,LOC101481254,LOC102208360 coding downstream 677649 25982681 ~ 25993176 (+)
gfm2 gfm2,LOC102784364 coding downstream 692888 25997920 ~ 26005107 (+)
G177651 NA non-coding upstream 41075 25204255 ~ 25204487 (+)
G177645 NA non-coding upstream 56931 25187680 ~ 25188631 (+)
G177643 NA non-coding upstream 245521 24999803 ~ 25000041 (+)
G177608 aif1l,LOC102776310,LOC102215481 non-coding upstream 437943 24800117 ~ 24807619 (+)
G177586 NA non-coding upstream 558760 24684059 ~ 24686802 (+)
G177681 NA non-coding downstream 204287 25509319 ~ 25512952 (+)
G177711 NA non-coding downstream 207986 25513018 ~ 25513442 (+)
G177714 NA non-coding downstream 224679 25529711 ~ 25529954 (+)
G177747 LOC107090900,LOC101079510,LOC104964918,LOC103390068 non-coding downstream 391644 25696676 ~ 25697262 (+)
G177748 NA non-coding downstream 402915 25707947 ~ 25710600 (+)
G177596 map1b other upstream 533921 24702971 ~ 24711641 (+)
dnlz dnlz,LOC104941974 other upstream 1087941 24155385 ~ 24157621 (+)
rpl37 rpl37 other upstream 1518320 23723478 ~ 23727242 (+)
LOC120546141 NA other upstream 1519510 23725974 ~ 23726052 (+)
LOC120546142 NA other upstream 1521317 23724166 ~ 23724245 (+)
G177715 NA other downstream 228100 25533132 ~ 25533689 (+)
G177759 NA other downstream 524686 25829718 ~ 25849122 (+)
G177809 hexb,LOC102784651 other downstream 713132 26018164 ~ 26021831 (+)
G177848 btf3,LOC104954705,LOC107080991 other downstream 914449 26219481 ~ 26244891 (+)
LOC120545651 mol1a,LOC100706667,LOC102220180,LOC105027268,LOC103353284,LOC106562938,LOC103389989 other downstream 1031275 26336307 ~ 26412013 (+)

Expression


Co-expression Network