gfm2 (gfm2,LOC102784364)


Basic Information

Item Value
gene id gfm2
gene name gfm2,LOC102784364
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 25997920 ~ 26005107 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780758.1
GTTTCTAGGGGTGTATTTTGTAGCCGCACTTTATGAAAGCGTGACATTTAACTGCAGATTATGTTGTTTTCTAGGACGTTGTATTGTTTTTAGTGTGTGATAGATTAAGTATTTATCTGATGGCTATAAGCATACGTCTCCCTCGTTTTTATGTCTTGTATTGTTATGGTGTAGCCATTGCAAGCTGGCTGACGTAGCTCCGTCTTCTGTTAACTGCTTAGCAATGGTTCGTCTGAAGTTAAGACTAAGGAAAAAGCTTGGAAGATAAGCAGACATTAAAGATACACGTTAGAGCCTGTCGGATATTAAGCACGATGATGTCGGGAAGGTATTTATTAACTGCTGGACTCCAGTGCTGCAGATGCAGAGTGAGCTGTCATGTAAAACGACACTACAGCTTTCTTCCAGATGATGTCAAATCACTGCGGGCTGTGGTCAACCCTGATATATCCAAGATCCGAAACATCGGCATTATGGCCCACATTGATGCAGGAAAGACAACAACCACAGAAAGGATGCTTTATTACTCTGGCTATACGAGAGCACTAGGAGACGTGGACGACGGGGATACGGTCACAGATTTTATGGCTCAAGAGAGGGAGCGTGGCATCACCATACAGTCGGCAGCAGTCACGTTTGATTGGAAAACTCATAGAATAAACCTCATAGACACCCCAGGACATGTTGACTTCACTCTCGAGGTAGAGCGGGCACTTCGTGTTCTTGATGGGGCTGTTGCCGTGTTTGATGCTTCTGCCGGTGTTGAGGCTCAGACTCTAACTGTGTGGAGACAAGCAGAGAAGCACCATGTTCCCTGTCTATGTTTCCTGAATAAGATGGATAAGCCTGCAGCAAACCTACGTTTTTCCATTCAGAGCATAAAAcagaaattaaaagccaatCCGGTCCTCCTGCAGATTCCTGTTGGCAGTGGCAGAGACTTCTCAGGTGTGGTTGACTTGTTAACCAGCCAGAAGATGATATGGAAGCCAAAATCTATGAGACCCGATGATGGACGAATGTTTGAAAGCAAACCTCTCGACCAGTCGGATGAGCCAGAACTTTTGCAGGCGGTCAGTGAGGCCAGGGCAGCTTTAATTGAGCAGGTTGCTGATCTGGATGATGAGTTTACGGAACTGCTGCTGACTGACTTTAGTGACAATTTTGATGCTGTTCCCTCAATCAAACTACAGGAGGCTGTGCGGCGGGTGACTCTGGCCCGTAAAGGCGTCCCAGTACTCTGTGGGAGCTCTTTGAGAAACAAAGGTGTTCAGCCTCTTTTAGATGCTATCACTGCCTACCTGCCTGCCCCCAATGAACGACACCATGACCTGGTGCGGTGGTACAAGGACGACTTATGTGCTCTGGCCTTCAAGGTTCTGCATGACAAGCAGCGTGGTCCTCTGGTATTTCTCAGGATTTACTCTGGTACTCTGAAACCACAGACTGCTGTCCACAACATCAACAGGAACAGCATTGAGAGGATGAGCCGGCTGCTGGTGCCGTTTGCTGATCAGCATGTAGAAATCCCCTCGATGACAGCGGGAAACATCGCTCTGACTGTAGGACTGAAGCAGACAGTCACGGGGGACACCATCGTTTCATCGAAGGcttcagcagcagctgcagcccgCCGAGCCCAAAATGACGGTGTGGAAAGCAAGAAGCGTGGCGAACATGCCAGCGTTGTCCTTTCAGGAGTGGAGGTCCCTGATCCCGTCTTCTTCTGCACCATAGAACCGCCCACCATGGCCAAACAGGCTGATCTTGAGAATGCACTCAACTGCCTCCAGAGAGAAGACCCCAGTCTTAAAGTCAGGCTTGACCCTGACTCTGGACAGACCATTTTGTGTGGGATGGGAGAGCTGCACATCGAGATCATCCATGATCGAATCAGAAGAGAGTATGGCATTGAGACTCACCTTGGACCGCTACAGGTGGCTTACAGGGAGTCTATTCTCCACGAGGTCTCTACTACAGATACGCTGGACCGTACTGTTGGGGAGAGACGACATCTTGCGACAGTGGAGCTGGCTATCACACCTCATGAAATCTCCACTACCGGTAGTTCATGTGAATTAGCGTTTACAGAGGAATTGGGGGGGCAGCTATCACCAGAAATAAAGGATGCAGTGGAGAATGGAGTACACAGCTCCTACCTTCAAGGTCCCTTGCTAGGATATCCTTTACGGGGTGTATCGACACTGATCAAAAGTGTCAAGATGGAACCAGGGACGTCTCCTGCCATGGTGTCCGCCTGTGTGTCCCGCTGCATGCTGAAGGCTCTAAGGCTAGCTGGAGGTCAGGTCCTGGAGCCAGTGATGTCCCTTGAGGTGACTGTGGGGGAGGAACGCCTTAGCTCTGTGCTGGGGGACTTAGCCCAAAGACGAGGAACGGTTCGAGACATCCAGAGTCGTCACGACGACAAGGTGCTGCTAGCAACTGTGCCCTTGGCTGAGATGATGGGCTATTCCACCATCCTGCGAACACTGACGTCCGGCAATGCAACCTTCTCCCTGGAGCTGGACACCTATGAGGCCATGAACCCCCAGGACCAGAACACCCTTATTAAAAGAATGGCTGGTCTGCTGTGATTTCCCGTTCTCAACAATGTGAAACCGTTCAGCAATGGGACCAATGGCCTTCTGAAACCGAGGCATACCCAAACAGATTTTCCAGGACTAATGGTATATATCAGACTAAGCAAGTAAATTCTATTTATAGTATGAATACCCACTGCAGGGAGGACAATACAAATGTCATAGTGTACCATGTTCTTatctaaatacaaaataaatgtgaagcaaaatgttg

Function

symbol description
gfm2 Predicted to enable GTPase activity. Predicted to be involved in mitochondrial translation and ribosome disassembly. Predicted to act upstream of or within translation. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 39. Orthologous to human GFM2 (GTP dependent ribosome recycling factor mitochondrial 2).

NR:

description
ribosome-releasing factor 2, mitochondrial

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K02355 fusA, GFM, EFG; elongation factor G

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780758.1 True 2814 mRNA 0.49 20 25997920 26005107

Neighbor

gene id symbol gene type direction distance location
LOC120545449 LOC104943206,LOC100700751,LOC102783804,LOC103374055,LOC102290254,LOC101481254,LOC102208360 coding upstream 4744 25982681 ~ 25993176 (+)
LOC120545450 NA coding upstream 11242 25982670 ~ 25986678 (+)
LOC120545451 NA coding upstream 25135 25969456 ~ 25972785 (+)
agpat2 agpat2,LOC103360602,LOC103390057 coding upstream 69781 25907225 ~ 25928139 (+)
LOC120545226 dab2ip,LOC102777858 coding upstream 564916 25276529 ~ 25433004 (+)
enc1 enc1,LOC106529253,LOC104945826 coding downstream 26591 26031698 ~ 26043300 (+)
ankra2 ankra2 coding downstream 205830 26210937 ~ 26218273 (+)
foxd1 foxd1,LOC102786484,LOC102309925 coding downstream 230045 26235152 ~ 26237093 (+)
dck dck,LOC102787471 coding downstream 407993 26413100 ~ 26421846 (+)
LOC120545881 LOC103353282,LOC104952208 coding downstream 417978 26423085 ~ 26464694 (+)
G177802 nsa2 non-coding upstream 222 25995444 ~ 25997698 (+)
G177769 NA non-coding upstream 67636 25928297 ~ 25930284 (+)
G177760 NA non-coding upstream 171931 25825743 ~ 25825989 (+)
LOC120545910 NA non-coding upstream 184685 25812468 ~ 25813235 (+)
G177751 LOC103360605,LOC101079510 non-coding upstream 264916 25729673 ~ 25733004 (+)
G177874 NA non-coding downstream 355287 26360394 ~ 26361272 (+)
G177876 NA non-coding downstream 364734 26369841 ~ 26373688 (+)
G177937 NA non-coding downstream 509419 26514526 ~ 26514962 (+)
LOC120546076 NA non-coding downstream 686274 26691381 ~ 26692888 (+)
G178045 NA non-coding downstream 1099671 27104778 ~ 27105030 (+)
G177759 NA other upstream 148798 25829718 ~ 25849122 (+)
G177715 NA other upstream 464231 25533132 ~ 25533689 (+)
zgc:63972 cuta,LOC103373665 other upstream 692888 25245562 ~ 25305032 (+)
G177596 map1b other upstream 1286279 24702971 ~ 24711641 (+)
dnlz dnlz,LOC104941974 other upstream 1840299 24155385 ~ 24157621 (+)
G177809 hexb,LOC102784651 other downstream 13057 26018164 ~ 26021831 (+)
G177848 btf3,LOC104954705,LOC107080991 other downstream 214374 26219481 ~ 26244891 (+)
LOC120545651 mol1a,LOC100706667,LOC102220180,LOC105027268,LOC103353284,LOC106562938,LOC103389989 other downstream 331200 26336307 ~ 26412013 (+)
LOC120546038 NA other downstream 581540 26586647 ~ 26614959 (+)
LOC120545040 LOC103353292 other downstream 722703 26727810 ~ 26930294 (+)

Expression


Co-expression Network