ankra2 (ankra2)


Basic Information

Item Value
gene id ankra2
gene name ankra2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 26210937 ~ 26218273 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779006.1
TGCACCCCGTTCTGGACGCAACTAATTGCGCATGCGTAAATTTATCAAAACATCGAATAAAGAGCATAGACAGTATGATAAAGAGGGGTGACCGCATGAagatatttaaataaaacaatgccTTATCGAgtgTGCGCTGGCTTCAGTTTAATCTCGGTGTGACAGCTCGGTGAGTAAATCAGAGGATGGACAACGTTACCGTGTCAGCCTCTGGTGGGTCAGCAGAAGACATGGAGGGGATCTGTGTAATGCCGGACTTGAGTGCCATCAAGACTGAGCAGTCGGTAGGAGCGAGCCCAGATGACACGGGCGCCCAAAATGTGGCTATGGGCATCAAGTTCATCCTGCCCAACCGCTTTGACATGAACGTTTGCTCAAGATTTGTCAAGTCGCTCAACGAGGAGGACAGCAAGAACATCCAGGACCAGGTCAACTCTGATCTGGAGGTGGCTTCTGTTTTATTCAAAGCTGAGTGCAACATCCAGACCTCACCTTCCCCGGGGATACAAGTGCGCCACGTTTATACGCCATCCACCACCAAACACTTCTCCCCCATCAAACAGTCCACCACACTCACCAATAAACACCGTGGCAATGAGGTTTCTTCCACACCTCTTTTGGTGCATTCTTTGTCCATTCATCAGCTTGCAGCCCAGGGTGAAATGGTGTTTCTGGCCAGCAGGATTGAACAAGAGACTGTCATCAACCTCCAAGATGAAGAAGGCTTTACCCCCCTGATGTGGGCAGCTGCACATGGACAAATCGCTGTGGTCGAGTTTCTGCTCCAAAATGGTGCCGATCCCAACCTCCTGGCCAAAGGGAGGGAAAGTGCTCTGTCCTTGGCCTGCAGCAAGGGATACACTGATATTGTGAAGATGCTCATTGACTGTGGTGTTGATGTCAATGAATATGACTGGAATGGAGGAGCCCCTTTGCTGTACGCTGTCCATGGGAACCATGTGCGCTGTGTTGAAATCTTGTTAGAGAGTGGTGCTGATCCTACCATTGAGTCAGATTCCGGATTCAATGCAATGGACATGGCTGTGGCTATGGGCCACCGGAATGTTCAACAGGTGATGGAGGCGCACTTACTGAAGTTACTGATGGCAATCAGAGAATGAACTGCGACGCCTGAGGAAAACAAAAATCCTGAAGGGGCGCCGCTCGGCTCTGGACAATCATGTAGCACGCCCACGCTGTCGGCCAACGGGACTATTTTGTTCCACTAAGTGATATTTTAACAGCGTTAACCTAACCTTATTTAGTTGCCATCATGCACATGAAGCTTTGCACTGTGTGACTTTTCAATTTTAACTTCTTCAAACTGTCTTACTCTTTACACTTTTCACATTGAATGCAGCAGTAGCATATCTGATCTGGACACAATGGCAGATTTTTCTATAAGAACATAAAACAAAGTTGAAGTTTCTCACTTCAGCCCAGCATGCACTGCACTCCACCTGTAGTATGCTGCCAAATGTGGAGAGCACTTTACCTAAAAACATGTAGGTTTTGAATCTTTTCATATcgtatattacattacatgcaaTCATTGGCTGTTCCAACCTAGTCCCGTAGtggcaagtgtttttttttttttttaaacgtattAACCGTTATAAGAAACCGTTTTTAAGAGTGAAAGAATATTAATGTAATCTGTTGAATTGCCTCATGCTCATACCGTCTGGTCTTCATGGTGAGCCCAAGCACATTCAGTCTGTGGCTCATTCACTTCTGAAGACTGGAAGTGGATTGGAAATACGTTCTCGCAGACTGGAATGCACACGGTACCGGCTGTTTGCGGATCCTGAAGATCTTTGTGTTGGTTGTACcgagtttatttattttttgcgtTGTAATGCGATAGAATTCTCAttgatgtatgtgtattgtgatACCAATGTCCACTGATGTGTAGTGAATTTTAAAAGACCTCATTTGAATTGTCCCACAAGGTTATTGTGGTGCCGTTTGCCACTGTACGATGGTGCTCGTGTTTTACACCAGTCAGAGGTGGTGGATTAACAAATAACTTGTACTGACCTCAGTATCGCCCATCCTTCTGTACAGATATTTAACTGATAGCAAGTTGAAAAGGTCAAACCACTGTTTTGTAATCACTGATATAAAGCGGTTATTTAATTAAAAGatctttttaaactgca

Function

symbol description
ankra2 Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human ANKRA2 (ankyrin repeat family A member 2).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21486 ANKRA2; ankyrin repeat family A protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779006.1 True 2168 mRNA 0.45 9 26210937 26218273

Neighbor

gene id symbol gene type direction distance location
enc1 enc1,LOC106529253,LOC104945826 coding upstream 167637 26031698 ~ 26043300 (+)
gfm2 gfm2,LOC102784364 coding upstream 205830 25997920 ~ 26005107 (+)
LOC120545449 LOC104943206,LOC100700751,LOC102783804,LOC103374055,LOC102290254,LOC101481254,LOC102208360 coding upstream 217761 25982681 ~ 25993176 (+)
LOC120545450 NA coding upstream 224259 25982670 ~ 25986678 (+)
LOC120545451 NA coding upstream 238152 25969456 ~ 25972785 (+)
foxd1 foxd1,LOC102786484,LOC102309925 coding downstream 16879 26235152 ~ 26237093 (+)
dck dck,LOC102787471 coding downstream 194827 26413100 ~ 26421846 (+)
LOC120545881 LOC103353282,LOC104952208 coding downstream 204812 26423085 ~ 26464694 (+)
LOC120545806 LOC103353293,LOC100699672 coding downstream 255293 26473566 ~ 26475470 (+)
fbp1b LOC103389985,LOC104953344,LOC103353278 coding downstream 294550 26512823 ~ 26519174 (+)
G177802 nsa2 non-coding upstream 213239 25995444 ~ 25997698 (+)
G177769 NA non-coding upstream 280653 25928297 ~ 25930284 (+)
G177760 NA non-coding upstream 384948 25825743 ~ 25825989 (+)
LOC120545910 NA non-coding upstream 397702 25812468 ~ 25813235 (+)
G177751 LOC103360605,LOC101079510 non-coding upstream 477933 25729673 ~ 25733004 (+)
G177874 NA non-coding downstream 142121 26360394 ~ 26361272 (+)
G177876 NA non-coding downstream 151568 26369841 ~ 26373688 (+)
G177937 NA non-coding downstream 296253 26514526 ~ 26514962 (+)
LOC120546076 NA non-coding downstream 473108 26691381 ~ 26692888 (+)
G178045 NA non-coding downstream 886505 27104778 ~ 27105030 (+)
G177809 hexb,LOC102784651 other upstream 189106 26018164 ~ 26021831 (+)
G177759 NA other upstream 361815 25829718 ~ 25849122 (+)
G177715 NA other upstream 677248 25533132 ~ 25533689 (+)
zgc:63972 cuta,LOC103373665 other upstream 905905 25245562 ~ 25305032 (+)
G177596 map1b other upstream 1499296 24702971 ~ 24711641 (+)
G177848 btf3,LOC104954705,LOC107080991 other downstream 1208 26219481 ~ 26244891 (+)
LOC120545651 mol1a,LOC100706667,LOC102220180,LOC105027268,LOC103353284,LOC106562938,LOC103389989 other downstream 118034 26336307 ~ 26412013 (+)
LOC120546038 NA other downstream 368374 26586647 ~ 26614959 (+)
LOC120545040 LOC103353292 other downstream 509537 26727810 ~ 26930294 (+)
nln nln other downstream 784186 27002459 ~ 27011449 (+)

Expression


Co-expression Network