LOC120546076


Basic Information

Item Value
gene id LOC120546076
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 26691381 ~ 26692888 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636783.1
GTTTAGTCTTTCTTGTAGTATAGGTTTTGTTATTAAAGCTAGCGTTTTGTTTCATTAACCTGCGGACTGGTCTCCTGTATTTGGGTCCTCCTTTCAAACCCTGGTGCTGCATCAGGATCACTGAAGACAAACACTTCAGCGGTTAACGTTACTCATgaactttgttttcaagtaatGCGATCATCATTGGTTCATGTAATTGATAGGCGGGGCCATCCACTTGGGTTGAGTGGGAGCACCTGGGCCCAATGCTCCCACTCACTACATAAGCTACCACCTTGGTCCTCTCAGAgacttctttattttttttttcaccaacaCCCGCACACCATCCCACACATCCACTCACTGACATGGCTGGCTTTACTGCCATCCACATCTCTTTTGCAacttagttgttgtttttttgtaaataaatcaGTTAATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636783.1 True 430 lncRNA 0.43 2 26691381 26692888

Neighbor

gene id symbol gene type direction distance location
zgc:162472 NA coding upstream 105168 26566849 ~ 26586213 (+)
dab2 dab2 coding upstream 126774 26555227 ~ 26564607 (+)
gas1b LOC103353277,LOC104953345 coding upstream 159026 26530224 ~ 26532355 (+)
fbp1b LOC103389985,LOC104953344,LOC103353278 coding upstream 172207 26512823 ~ 26519174 (+)
LOC120545806 LOC103353293,LOC100699672 coding upstream 215911 26473566 ~ 26475470 (+)
LOC120545041 LOC104936786,LOC103353268,LOC104946837 coding downstream 247266 26940154 ~ 26966123 (+)
LOC120545850 NA coding downstream 280867 26973755 ~ 26975385 (+)
LOC120545882 NA coding downstream 284573 26977461 ~ 26979183 (+)
trappc13 trappc13 coding downstream 288268 26981156 ~ 26992779 (+)
srek1 srek1,LOC106947217,LOC103154506,LOC106917056 coding downstream 383622 27076510 ~ 27091059 (+)
G177937 NA non-coding upstream 176419 26514526 ~ 26514962 (+)
G177876 NA non-coding upstream 317693 26369841 ~ 26373688 (+)
G177874 NA non-coding upstream 330109 26360394 ~ 26361272 (+)
G177802 nsa2 non-coding upstream 693683 25995444 ~ 25997698 (+)
G177769 NA non-coding upstream 761097 25928297 ~ 25930284 (+)
G178045 NA non-coding downstream 411890 27104778 ~ 27105030 (+)
G178155 NA non-coding downstream 779023 27471911 ~ 27513908 (+)
G178166 tia1,LOC100703764,LOC102796970,LOC103362264,LOC101155125 non-coding downstream 823935 27516823 ~ 27524148 (+)
G178198 NA non-coding downstream 877665 27570553 ~ 27573678 (+)
G178205 LOC103362269,LOC105918759 non-coding downstream 914592 27607480 ~ 27608213 (+)
LOC120546038 NA other upstream 76422 26586647 ~ 26614959 (+)
LOC120545651 mol1a,LOC100706667,LOC102220180,LOC105027268,LOC103353284,LOC106562938,LOC103389989 other upstream 279368 26336307 ~ 26412013 (+)
G177848 btf3,LOC104954705,LOC107080991 other upstream 446490 26219481 ~ 26244891 (+)
G177809 hexb,LOC102784651 other upstream 669550 26018164 ~ 26021831 (+)
G177759 NA other upstream 842259 25829718 ~ 25849122 (+)
LOC120545040 LOC103353292 other downstream 34922 26727810 ~ 26930294 (+)
nln nln other downstream 309571 27002459 ~ 27011449 (+)
erbin erbin other downstream 320001 27012889 ~ 27065706 (+)
lhfpl2a lhfpl2,LOC101175333 other downstream 963648 27656536 ~ 27697932 (+)
LOC120545218 NA other downstream 1874258 28567146 ~ 28572395 (+)

Expression


Co-expression Network