lhfpl2a (lhfpl2,LOC101175333)


Basic Information

Item Value
gene id lhfpl2a
gene name lhfpl2,LOC101175333
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 27656536 ~ 27697932 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780750.1
ACGGGGGCAGTCACTCCCATCCCAACGGTAGTATGTCTGGGGGCAGAAGAGGAGGACGGAACCATTCATTCTTCTGTGGTTCCCGGAGAAAACgtggaggatgaagaagagacactaaagggggaaaaaataataacagttCAAATCAAACCCGAAGACTTAAACTGCACGAGGAAGACACCCATAAAGACCCTGCTGGACTTTAGAGGCGCCGCTTCAAAAAAATCGCACCGCCAGCAGTTAGGCGTTGTGAGGAGTTGAAAGATTTGGATCGTTTGGATTTAACTGAAGAATTTGTCTCTGCGTCCACACGAGAGGTGTGTCTGATGTGACGCCAGCGGGCTGGCTCAGGGAACACAACTTCAATACAATGTAGACACCGAAAACCAGACAGAATAAGAGCCTGAAGACCGAGTCGACCAAAGGAGGGTGAGTtcaaggaggaggaagaacagCTGTGCTGAAACGACACCGGAAGAAGATAAGAAGTGAAAGgagcagagagaaaaaggggGAAGCAGCAGACTGTGAATCATTGACCAGAACCTTGTCTGTACAGCGCTGTCGTCCACTCCTTCCCGAGAAGTGTTCACTTGCTCTCATATCTCCGCCGGAGAAGAATCCCAACCACCGGCTCTCGGCCTTTCGAGGGCCTCACGCTCTACCTGTCCACCTCTCAGCAGCGTTGAAATCTGAGCAGAGAGAGACTCCAGCCACCGTCAGAATGTGCCATGTCATTGTCACCTGCCGCTCCATGCTGTGGACTCTGCTGAGTATTGTGACCGCTTTCGGAGAGCTCATCGCCTTCATGAGCACTGACTGGCTGGTGGGATTCCCCCGCACACCTGATGCTGTCTTCGGCCCCCATGGGGCCACCGCAGCCGGAGAGGCCTACAGGCCCACTTTAGGCATCTACGGCCGCTGTATAAAACTGCCCCACCTTAAGCGTGGAATACTGTGCGGACCGTACGCGATACACTTTGGGGAGATTGCCAGCGGGTTCTGGCAGGCAACTTCTATCTTCCTGGCGGCAGGGATCCTGCTGCTGTGTGCTGTGGCGTTCATCTCGGTCTTCACCATGTGCTTccagagcatcatgaagaagaGCATCTTCAACGTGTGTGGACTGCTGCAAGGGATCGCAGGTCTGTTCCTGATCCTGGGTCTGATGCTGTACCCCGCTGGCTGGGGTTCAGACAAGGTCCAGCTGTACTGCGGTCCCGACGCGGCTCCGTACCGGGCCGGGCTCTGCTCCATGGGCTGGGCCTTCTACACCGCCATGGGCGGCACCGTGCTCACCTTCATCTGCGCTGTCTTCTCCGCACAGGCCGAGATCGCCACCTCCAGCGACAAGGTCCAGGAGGAGATCGAGGAAGGGAAAAGCCTCATCTGCCTCCTCTGAGGCCCAGATACTTTTGTCCTGttgggaaaagaagaagaagaagaagacctgCCTTCTGTCTTTTCTCATAAGACTGGCCTGTGAAATGGAGGCCCCTGCGTTGTTTACCACTAAAactgactgtttgtctgtcGCTGTTTTGTGTTCATGTGGGAGAAATCTACAAGTGCCAAGTTTTTTTCTCagtgtttgtctttgtctttcagCAACGAGAGGTGCTGTGTCTGTTATTGTATTCACCTTTCACAATGTGGACGCCCAGAGAGGCTTTGTCTGTCGCCACCTGTTCTGTAAATAAGtgtgattatatatattttgtacatAGTTATGATGATCGCAGAATGATCGGTCGGCTTGATCCAGGCTGGGCTGATGATGTCACTCTTGCCTTAAAAACACTGGTGTTTTTGTCACCAGACTACAACCAGCTAAACCTGGATCTGTTAACTGTTTGCCACGTGTGAGTATAAACTCAACAAGGGAACCACTACTCAGTCAGAATAAACTACTCACAGAACAAAATGGCTTCCGCTCGGAGCGGATGTCCTTTTTTAAAGCTTACAGAATGTACATGTCATTTGAATGATTTAATGTGTTTGCAGACCCTTGAAATGTATCGATGGAAAATGGATCTCAACCCAGACTGCGCGAGGACGTGCAGAGGAAAGCTCTGTGGTGCCTTCTCGTTTGTCCCCTCTCCCGAAATGAAGTCAGCTTAATCCTAGCCTGAGCGGAGAGCTGACCTGTGAAGGGTCTGTGCCTGGTCCTCGTTCAGCAGACATCCTGGAATCTGTGCACAAAGACATGGACAATGAATGCTGAGGACACATGCAGTACATGaagtattgttattgttattagtaATGTCTGGTTTCAGGGAGTCTGCCGAGTCCTAGATGGTGTCCTATCTGTTCCCATGTGTCTGTTCTACCGAAAGAATAAAgagaagggagaaaaaaaaa
>XM_039780751.1
TCGGGAGTCAGGAgtctgagagaaagagagcagcaTTAAAAGTGTGTGAGCAGAGGAGAAGAGTCAGGCCAGAGAAGCCACATCTCCAGGAGAGCTGGACTATCCACAGACCAATGGAGACAGGTGTGTCTGATGTGACGCCAGCGGGCTGGCTCAGGGAACACAACTTCAATACAATGTAGACACCGAAAACCAGACAGAATAAGAGCCTGAAGACCGAGTCGACCAAAGGAGGGTGAGTtcaaggaggaggaagaacagCTGTGCTGAAACGACACCGGAAGAAGATAAGAAGTGAAAGgagcagagagaaaaaggggGAAGCAGCAGACTGTGAATCATTGACCAGAACCTTGTCTGTACAGCGCTGTCGTCCACTCCTTCCCGAGAAGTGTTCACTTGCTCTCATATCTCCGCCGGAGAAGAATCCCAACCACCGGCTCTCGGCCTTTCGAGGGCCTCACGCTCTACCTGTCCACCTCTCAGCAGCGTTGAAATCTGAGCAGAGAGAGACTCCAGCCACCGTCAGAATGTGCCATGTCATTGTCACCTGCCGCTCCATGCTGTGGACTCTGCTGAGTATTGTGACCGCTTTCGGAGAGCTCATCGCCTTCATGAGCACTGACTGGCTGGTGGGATTCCCCCGCACACCTGATGCTGTCTTCGGCCCCCATGGGGCCACCGCAGCCGGAGAGGCCTACAGGCCCACTTTAGGCATCTACGGCCGCTGTATAAAACTGCCCCACCTTAAGCGTGGAATACTGTGCGGACCGTACGCGATACACTTTGGGGAGATTGCCAGCGGGTTCTGGCAGGCAACTTCTATCTTCCTGGCGGCAGGGATCCTGCTGCTGTGTGCTGTGGCGTTCATCTCGGTCTTCACCATGTGCTTccagagcatcatgaagaagaGCATCTTCAACGTGTGTGGACTGCTGCAAGGGATCGCAGGTCTGTTCCTGATCCTGGGTCTGATGCTGTACCCCGCTGGCTGGGGTTCAGACAAGGTCCAGCTGTACTGCGGTCCCGACGCGGCTCCGTACCGGGCCGGGCTCTGCTCCATGGGCTGGGCCTTCTACACCGCCATGGGCGGCACCGTGCTCACCTTCATCTGCGCTGTCTTCTCCGCACAGGCCGAGATCGCCACCTCCAGCGACAAGGTCCAGGAGGAGATCGAGGAAGGGAAAAGCCTCATCTGCCTCCTCTGAGGCCCAGATACTTTTGTCCTGttgggaaaagaagaagaagaagaagacctgCCTTCTGTCTTTTCTCATAAGACTGGCCTGTGAAATGGAGGCCCCTGCGTTGTTTACCACTAAAactgactgtttgtctgtcGCTGTTTTGTGTTCATGTGGGAGAAATCTACAAGTGCCAAGTTTTTTTCTCagtgtttgtctttgtctttcagCAACGAGAGGTGCTGTGTCTGTTATTGTATTCACCTTTCACAATGTGGACGCCCAGAGAGGCTTTGTCTGTCGCCACCTGTTCTGTAAATAAGtgtgattatatatattttgtacatAGTTATGATGATCGCAGAATGATCGGTCGGCTTGATCCAGGCTGGGCTGATGATGTCACTCTTGCCTTAAAAACACTGGTGTTTTTGTCACCAGACTACAACCAGCTAAACCTGGATCTGTTAACTGTTTGCCACGTGTGAGTATAAACTCAACAAGGGAACCACTACTCAGTCAGAATAAACTACTCACAGAACAAAATGGCTTCCGCTCGGAGCGGATGTCCTTTTTTAAAGCTTACAGAATGTACATGTCATTTGAATGATTTAATGTGTTTGCAGACCCTTGAAATGTATCGATGGAAAATGGATCTCAACCCAGACTGCGCGAGGACGTGCAGAGGAAAGCTCTGTGGTGCCTTCTCGTTTGTCCCCTCTCCCGAAATGAAGTCAGCTTAATCCTAGCCTGAGCGGAGAGCTGACCTGTGAAGGGTCTGTGCCTGGTCCTCGTTCAGCAGACATCCTGGAATCTGTGCACAAAGACATGGACAATGAATGCTGAGGACACATGCAGTACATGaagtattgttattgttattagtaATGTCTGGTTTCAGGGAGTCTGCCGAGTCCTAGATGGTGTCCTATCTGTTCCCATGTGTCTGTTCTACCGAAAGAATAAAgagaagggagaaaaaaaaa
>XM_039780752.1
ACGGGGGCAGTCACTCCCATCCCAACGGTAGTATGTCTGGGGGCAGAAGAGGAGGACGGAACCATTCATTCTTCTGTGGTTCCCGGAGAAAACgtggaggatgaagaagagacactaaagggggaaaaaataataacagttCAAATCAAACCCGAAGACTTAAACTGCACGAGGAAGACACCCATAAAGACCCTGCTGGACTTTAGAGGCGCCGCTTCAAAAAAATCGCACCGCCAGCAGTTAGGCGTGTGTCTGATGTGACGCCAGCGGGCTGGCTCAGGGAACACAACTTCAATACAATGTAGACACCGAAAACCAGACAGAATAAGAGCCTGAAGACCGAGTCGACCAAAGGAGGGTGAGTtcaaggaggaggaagaacagCTGTGCTGAAACGACACCGGAAGAAGATAAGAAGTGAAAGgagcagagagaaaaaggggGAAGCAGCAGACTGTGAATCATTGACCAGAACCTTGTCTGTACAGCGCTGTCGTCCACTCCTTCCCGAGAAGTGTTCACTTGCTCTCATATCTCCGCCGGAGAAGAATCCCAACCACCGGCTCTCGGCCTTTCGAGGGCCTCACGCTCTACCTGTCCACCTCTCAGCAGCGTTGAAATCTGAGCAGAGAGAGACTCCAGCCACCGTCAGAATGTGCCATGTCATTGTCACCTGCCGCTCCATGCTGTGGACTCTGCTGAGTATTGTGACCGCTTTCGGAGAGCTCATCGCCTTCATGAGCACTGACTGGCTGGTGGGATTCCCCCGCACACCTGATGCTGTCTTCGGCCCCCATGGGGCCACCGCAGCCGGAGAGGCCTACAGGCCCACTTTAGGCATCTACGGCCGCTGTATAAAACTGCCCCACCTTAAGCGTGGAATACTGTGCGGACCGTACGCGATACACTTTGGGGAGATTGCCAGCGGGTTCTGGCAGGCAACTTCTATCTTCCTGGCGGCAGGGATCCTGCTGCTGTGTGCTGTGGCGTTCATCTCGGTCTTCACCATGTGCTTccagagcatcatgaagaagaGCATCTTCAACGTGTGTGGACTGCTGCAAGGGATCGCAGGTCTGTTCCTGATCCTGGGTCTGATGCTGTACCCCGCTGGCTGGGGTTCAGACAAGGTCCAGCTGTACTGCGGTCCCGACGCGGCTCCGTACCGGGCCGGGCTCTGCTCCATGGGCTGGGCCTTCTACACCGCCATGGGCGGCACCGTGCTCACCTTCATCTGCGCTGTCTTCTCCGCACAGGCCGAGATCGCCACCTCCAGCGACAAGGTCCAGGAGGAGATCGAGGAAGGGAAAAGCCTCATCTGCCTCCTCTGAGGCCCAGATACTTTTGTCCTGttgggaaaagaagaagaagaagaagacctgCCTTCTGTCTTTTCTCATAAGACTGGCCTGTGAAATGGAGGCCCCTGCGTTGTTTACCACTAAAactgactgtttgtctgtcGCTGTTTTGTGTTCATGTGGGAGAAATCTACAAGTGCCAAGTTTTTTTCTCagtgtttgtctttgtctttcagCAACGAGAGGTGCTGTGTCTGTTATTGTATTCACCTTTCACAATGTGGACGCCCAGAGAGGCTTTGTCTGTCGCCACCTGTTCTGTAAATAAGtgtgattatatatattttgtacatAGTTATGATGATCGCAGAATGATCGGTCGGCTTGATCCAGGCTGGGCTGATGATGTCACTCTTGCCTTAAAAACACTGGTGTTTTTGTCACCAGACTACAACCAGCTAAACCTGGATCTGTTAACTGTTTGCCACGTGTGAGTATAAACTCAACAAGGGAACCACTACTCAGTCAGAATAAACTACTCACAGAACAAAATGGCTTCCGCTCGGAGCGGATGTCCTTTTTTAAAGCTTACAGAATGTACATGTCATTTGAATGATTTAATGTGTTTGCAGACCCTTGAAATGTATCGATGGAAAATGGATCTCAACCCAGACTGCGCGAGGACGTGCAGAGGAAAGCTCTGTGGTGCCTTCTCGTTTGTCCCCTCTCCCGAAATGAAGTCAGCTTAATCCTAGCCTGAGCGGAGAGCTGACCTGTGAAGGGTCTGTGCCTGGTCCTCGTTCAGCAGACATCCTGGAATCTGTGCACAAAGACATGGACAATGAATGCTGAGGACACATGCAGTACATGaagtattgttattgttattagtaATGTCTGGTTTCAGGGAGTCTGCCGAGTCCTAGATGGTGTCCTATCTGTTCCCATGTGTCTGTTCTACCGAAAGAATAAAgagaagggagaaaaaaaaa
>XR_005636773.1
ACGGGGGCAGTCACTCCCATCCCAACGGTAGTATGTCTGGGGGCAGAAGAGGAGGACGGAACCATTCATTCTTCTGTGGTTCCCGGAGAAAACgtggaggatgaagaagagacactaaagggggaaaaaataataacagttCAAATCAAACCCGAAGACTTAAACTGCACGAGGAAGACACCCATAAAGACCCTGCTGGACTTTAGAGGCGCCGCTTCAAAAAAATCGCACCGCCAGCAGTTAGGCGTTGTGAGGAGTTGAAAGATTTGGATCGTTTGGATTTAACTGAAGAATTTGTCTCTGCGTCCACACGAGAGGTGTGTCTGATGTGACGCCAGCGGGCTGGCTCAGGGAACACAACTTCAATACAATGTAGACACCGAAAACCAGACAGAATAAGAGCCTGAAGACCGAGTCGACCAAAGGAGGGTGAGTtcaaggaggaggaagaacagCTGTGCTGAAACGACACCGGAAGAAGATAAGAAGTGAAAGgagcagagagaaaaaggggGAAGCAGCAGACTGTGAATCATTGACCAGAACCTTGTCTGTACAGCGCTGTCGTCCACTCCTTCCCGAGAAGTGTTCACTTGCTCTCATATCTCCGCCGGAGAAGAATCCCAACCACCGGCTCTCGGCCTTTCGAGGGCCTCACGCTCTACCTGTCCACCTCTCAGCAGCGTTGAAATCTGAGCAGAGAGAGACTCCAGCCACCGTCAGAATGTGCCATGTCATTGTCACCTGCCGCTCCATGCTGTGGACTCTGCTGAGTATTGTGACCGCTTTCGGAGAGCTCATCGCCTTCATGAGCACTGACTGGCTGGTGGGATTCCCCCGCACACCTGATGCTGTCTTCGGCCCCCATGGGGCCACCGCAGCCGGAGAGGCCTACAGGCCCACTTTAGGCATCTACGGCCGCTGTATAAAACTGCCCCACCTTAAGCGTGGAATACTGTGCGGACCGTACGCGATACACTTTGGGGAGATTGCCAGCGGGTTCTGGCAGGCAACTTCTATCTTCCTGGCGGCAGGGATCCTGCTGCTGTGTGCTGTGGCGTTCATCTCGGTCTTCACCATGTGCTTccagagcatcatgaagaagaGCATCTTCAACGTGTGTGGACTGCTGCAAGGGATCGCAGGTCTGTTCCTGATCCTGGGTCTGATGCTGTACCCCGCTGGCTGGGGTTCAGACAAGGTCCAGCTGTACTGCGGTCCCGACGCGGCTCCGTACCGGGCCGGGCTCTGCTCCATGGGCTGGGCCTTCTACACCGCCATGGGCGGCACCGTGCTCACCTTCATCTGCGCTGTCTTCTCCGCACAGGCCGAGATCGCCACCTCCAGCGACAAGGTCCAGGAGGAGATCGAGGAAGGGAAAAGCCTCATCTGCCTCCTCTGAGGCCCAGATACTTTTGTCCTGttgggaaaagaagaagaagaagaagacctgCCTTCTGTCTTTTCTCATAAGACTGGCCTGTGAAATGGAGGCCCCTGCGTTGTTTACCACTAAAactgactgtttgtctgtcGCTGTTTTGTGTTCATGTGGGAGAAATCTACAAGTGCCAAGTTTTTTTCTCagtgtttgtctttgtctttcagCAACGAGAGGTGCTGTGTCTGTTATTGTATTCACCTTTCACAATGTGGACGCCCAGAGAGGCTTTGTCTGTCGCCACCTGTTCTGTAAATAAGtgtgattatatatattttgtacatAGTTATGATGATCGCAGAATGATCGGTCGGCTTGATCCAGGCTGGGCTGATGATGTCACTCTTGCCTTAAAAACACTGGTGTTTTTGTCACCAGACTACAACCAGCTAAACCTGGATCTGTTAACTGTTTGCCACGTACCCTTGAAATGTATCGATGGAAAATGGATCTCAACCCAGACTGCGCGAGGACGTGCAGAGGAAAGCTCTGTGGTGCCTTCTCGTTTGTCCCCTCTCCCGAAATGAAGTCAGCTTAATCCTAGCCTGAGCGGAGAGCTGACCTGTGAAGGGTCTGTGCCTGGTCCTCGTTCAGCAGACATCCTGGAATCTGTGCACAAAGACATGGACAATGAATGCTGAGGACACATGCAGTACATGaagtattgttattgttattagtaATGTCTGGTTTCAGGGAGTCTGCCGAGTCCTAGATGGTGTCCTATCTGTTCCCATGTGTCTGTTCTACCGAAAGAATAAAgagaagggagaaaaaaaaa

Function

symbol description
lhfpl2 Predicted to be involved in development of primary female sexual characteristics; development of primary male sexual characteristics; and positive regulation of fertilization. Predicted to be located in plasma membrane and platelet alpha granule membrane. Predicted to be active in membrane.

NR:

description
PREDICTED: lipoma HMGIC fusion partner-like 2 protein

GO: NA

KEGG:

id description
K23893 LHFPL; LHFPL tetraspan subfamily member protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780750.1 True 2364 mRNA 0.51 4 27656536 27697932
XM_039780751.1 False 2170 mRNA 0.51 3 27682699 27697932
XM_039780752.1 False 2293 mRNA 0.51 3 27656536 27697932
XR_005636773.1 False 2222 transcript 0.52 5 27656536 27697932

Neighbor

gene id symbol gene type direction distance location
arsb arsb,LOC102799236 coding upstream 4447 27633737 ~ 27652089 (+)
dmgdh dmgdh coding upstream 25455 27610802 ~ 27631081 (+)
LOC120545398 homer1,LOC102798051 coding upstream 88427 27539440 ~ 27568109 (+)
pik3r1 pik3r1,LOC104930938,LOC103371488,LOC102795099,LOC105915567,LOC102216923 coding upstream 394934 27235532 ~ 27261602 (+)
mast4 mast4,LOC103371489 coding upstream 444395 27110753 ~ 27212141 (+)
ap3b1a ap3b1,LOC104966876 coding downstream 22265 27720197 ~ 27784006 (+)
tbca tbca coding downstream 131447 27829379 ~ 27844258 (+)
otpa otp,LOC107093773,LOC102789457 coding downstream 151733 27849665 ~ 27854808 (+)
wdr41 wdr41 coding downstream 169726 27867658 ~ 27880080 (+)
LOC120544969 crhbp coding downstream 262394 27960326 ~ 27966434 (+)
G178205 LOC103362269,LOC105918759 non-coding upstream 48323 27607480 ~ 27608213 (+)
G178198 NA non-coding upstream 82858 27570553 ~ 27573678 (+)
G178166 tia1,LOC100703764,LOC102796970,LOC103362264,LOC101155125 non-coding upstream 132388 27516823 ~ 27524148 (+)
G178155 NA non-coding upstream 142628 27471911 ~ 27513908 (+)
G178045 NA non-coding upstream 551506 27104778 ~ 27105030 (+)
G178210 NA non-coding downstream 4927 27702859 ~ 27706063 (+)
G178256 NA non-coding downstream 115551 27813483 ~ 27813878 (+)
G178266 NA non-coding downstream 234886 27932818 ~ 27933019 (+)
G178267 NA non-coding downstream 240972 27938904 ~ 27939748 (+)
G178348 NA non-coding downstream 513227 28211159 ~ 28211592 (+)
erbin erbin other upstream 590830 27012889 ~ 27065706 (+)
nln nln other upstream 645087 27002459 ~ 27011449 (+)
LOC120545040 LOC103353292 other upstream 726242 26727810 ~ 26930294 (+)
LOC120546038 NA other upstream 1041577 26586647 ~ 26614959 (+)
LOC120545651 mol1a,LOC100706667,LOC102220180,LOC105027268,LOC103353284,LOC106562938,LOC103389989 other upstream 1244523 26336307 ~ 26412013 (+)
LOC120545218 NA other downstream 869214 28567146 ~ 28572395 (+)
LOC120544907 hnrnpd,LOC104960871 other downstream 882336 28580268 ~ 28588032 (+)
G178506 NA other downstream 1246575 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 1308689 29006621 ~ 29083011 (+)
G178529 NA other downstream 1387017 29084949 ~ 29092326 (+)

Expression


Co-expression Network