G178529


Basic Information

Item Value
gene id G178529
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29084949 ~ 29092326 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241682
aggCTGTATCACGTGTCTATTCTTTGTACATGATCTTGCAGTGGGAGGACTGAGGGCCATGTTGAAGCGGTTTCCCTTCATGTTTTGTAGAAGCCCCCAACTTCGGTTTAGTCACATGGTTAAGTTTATAAGTTTATTATCATGGATAAACACTGTCTGCGACACTATCTGTGACATACAAGGGTTTCTAGCTATAGAacatgtgtgtagtgtgttcctGGCAGTGGAGGAAGAAGTACTCCGGTGTTTTACTTCAGTATAAGTAGCAGTCAGTACAACATGCATTCTCATAGGAACTCTTCAGACTTGTCATTTCCCATCCGTCCACCAGATGCCCTCACACTGTCTCCTGACTCCTACATCCACCTCCTCATTCCTCACTCACATAAATCAGCCCTTCTAATCTCCACCTGCTCCTGGCAAGAGTGAAACTCAAACATTTGCACATCTGGGAGGTACGCCGTCTGCTTCCCAAGTCTCTTATTTCATATCTCCTCGAACCGCAATTCCTTCTGGCCCTCCCGTCTGAAAGCTCTTATGACTGCCGAGGATTGaggagcgaggatggaggagggatctctgaggagctatgagcgaggaaaTACAAGAGCAGCCTTCCCAGACGCTGAAAGCCGTTACCAACTCCCCCCATACAGCTGACTTATTCACGTGAGGCTTCAGAGGAAAACACACAACCTagttttcctctctcctcgcgTCTCTCCCATGCTTCCTTGGTGGGGCTGGCTAAGACgggaggaagggaagcaagtgaagataacgtggatgcaatttaaggaACTGGGACATTCCCATAGTACAGCCTGTAACGTTTGATGGACCGCTGATCTCTGTGCAGTGAAGAAACGCCACGGCAATCTGCTCTCGGCAACAAGCACGgagataaaataaaagtttaaatcCCTTCAAAGACTTCtgactatttcagtttacacagcTCAGCAGTGGCTCCAGGAGAAGAGAAAGGAAAGCAGTCATAAAACCGAAGTCCGGCGTAGAGCGGCTGAGTGAacgtggtctggactctgtggaggagagtcatggagtcagagacgctgtagaaggacaggACACCTGcgctgtgatccaggtacactcctactctggaggacacAGGACCTGAGACGGGAGTGTGGACTTTGTCGCACCAAAATGTAGAACTGTTCTGGAAACAATCCAACgcccaagatttgtcatttCGTCCAAATACAGATTCATTCGACGCCCCTGTTCTGCCGATGttcttgtatgcgactgctacagaaactcctcctcctctcctcttcaccTCCCAGTAACgacgtccagtcagactctctctgCTCAGGACCTGACTAAATTCAGTGAATCTGTCTGCGTGACTAGAATAAGACTGTTGATGGTACATGAATGTTGCCTTtctgttcccctcagataataacagctgtgtgtttgctgtgtttggatccagtgtgattttacgtgaatattttaagaacccagctctggtcttgggctctggttctggttctggcaGTAACATGTCCACTTTAGTCCCGGTCAGTGAGTCGTttgtcctcttctctctcaggacgtcctgtagtttctctctgacttctgacacggccgctgtcacgtcctcaaagcagctcagaggacggatatggatgctggatgctgattggctgagtggtgacagtgaggggtagttgtgtagaaactggttgtgatcctctgtgtgtgagagcttcttcagctcagcgtctctcctcttcagctcagtgatctcctgctccagcttctcctgaagctctcTGACTCGACTCTCTTCACTTTTCTGCCtggatctgacctgctgcttcacatcagagcttcttttctccaggagacggatcagctcagtgaagatcttctcgctgtcctccgctgctttatcagcagagagattgatggcctccgcctgctgctgaagcagcttcacatctttctctctgtcctggattctctgctggatgttttgtCTACTCCCCTcgagctctctctgcctctcagctctctctgctgcagctgagactgtgtcgtggcctttatgtttatccatagagcagagataacagataagctgctgatcagtacggcagaacatcttcatcacctcatcGTGATGagagcagacgttctcctggagattcttggacggctccaccagcttgtgtttctttaacTGAGCGACATCATAATGAGGCTGAAGGTGTTTCTCGCAGTAAGAGACCAGACAGATCAGACAGGACTTGTGTGCTTTCAGTTTTCTCCCGGTGCAGATatcacaggccacatctccagctccagcatagcagtgatcagcaggagcagcttggagtccagtcttcttcagctcctccactaaaactgctaacatggtgtttttcagcaggacaggcctcggtgtgaagCTCTGTCTACACTGAGGGCAGCTGTGGGTTTCCTTCTCATCCCCTTCATCCCAGAAACTgttaatacagttcatgcagtagctgtgtccacagggaatagccaccggatccttcagtagatccagacagatggaacaagagaaaGTTTCTCGGTCCAGCTCAAGTcctttctgcgccatttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241682 True 2637 TUCP 0.49 2 29084949 29092326

Neighbor

gene id symbol gene type direction distance location
eif2b1 eif2b1 coding upstream 39818 29037069 ~ 29045131 (+)
clip1b LOC103361300 coding upstream 66178 28981477 ~ 29018771 (+)
LOC120545038 denr,LOC100690406,LOC101472698,LOC103375039,LOC102800030 coding upstream 103579 28979028 ~ 28981370 (+)
denr denr coding upstream 106022 28971400 ~ 28978927 (+)
kmt5aa LOC104947636,LOC103369788,LOC104940038 coding upstream 180630 28897490 ~ 28904319 (+)
rph3aa LOC104964590,LOC107086068,LOC102797992,LOC103361309 coding downstream 15890 29108216 ~ 29159101 (+)
pla2g3 NA coding downstream 71906 29164232 ~ 29176814 (+)
ttc28 NA coding downstream 87486 29179812 ~ 29346058 (+)
pitpnb LOC108247152,LOC107396064,LOC101477519,LOC106533593,LOC104948049,LOC103370350,LOC101162302 coding downstream 254443 29346769 ~ 29373529 (+)
naa25 naa25 coding downstream 285365 29377691 ~ 29411537 (+)
G178521 NA non-coding upstream 52587 29031515 ~ 29032362 (+)
G178491 NA non-coding upstream 176578 28904473 ~ 28908371 (+)
G178468 NA non-coding upstream 236066 28846471 ~ 28848883 (+)
G178460 NA non-coding upstream 252619 28828109 ~ 28832330 (+)
G178441 NA non-coding upstream 383543 28658485 ~ 28701406 (+)
G178710 NA non-coding downstream 352727 29445053 ~ 29458536 (+)
G178725 NA non-coding downstream 436099 29528425 ~ 29531359 (+)
G178728 NA non-coding downstream 451833 29544159 ~ 29544741 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding downstream 600112 29692438 ~ 29701839 (+)
G178847 NA non-coding downstream 679994 29772320 ~ 29790111 (+)
ptpn11a ptpn11 other upstream 1938 29006621 ~ 29083011 (+)
G178506 NA other upstream 139505 28944507 ~ 28945444 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 496917 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 512554 28567146 ~ 28572395 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 1387017 27656536 ~ 27697932 (+)
rasgrf2a NA other downstream 509205 29601531 ~ 29667231 (+)
G178845 NA other downstream 650297 29742623 ~ 29750295 (+)
LOC120545429 LOC104948058 other downstream 701478 29793804 ~ 29795825 (+)
G178881 NA other downstream 928993 30021319 ~ 30022217 (+)
zmiz2 zmiz2 other downstream 1167040 30259366 ~ 30310894 (+)

Expression


Co-expression Network