G178845


Basic Information

Item Value
gene id G178845
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29742623 ~ 29750295 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU242097
TATAAAGTAGCTGAAATTAGCTCCACGTCAACCAGCTGTGATATTAGAATGCTGCATGAGTAATAATGTTCCAGTTATGATACAAATGATAATATATCACTctcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtg
>TU242100
TATAAAGTAGCTGAAATTAGCTCCACGTCAACCAGCTGTGATATTAGAATGCTGCATGAGTAATAATGTTCCAGTTATGATACAAATGATAATATATCACTctcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctctctctgtgtgtgtgtctctgtgtgtgtctctctctgtgtgtgtatgtgtgtgtctctctctctatgtgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtgtgtctctctctctctctctgtgtgtgtgtctctctctgtgtgtgtctctctgtgtgtgtgtctctctctgtgtgtgtctctctctctatgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtgtctctctctctctctgtgtctctctctgtgtgtgtgtatgtgtgtgtctctctgtgtgtgtgtgtgtgtgtg
>TU242102
TATAAAGTAGCTGAAATTAGCTCCACGTCAACCAGCTGTGATATTAGAATGCTGCATGAGTAATAATGTTCCAGTTATGATACAAATGATAATATATCACTctcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtctctgtgtgtgtgtctctctgtgtctctgtgtgtgtgtgtgtgtgtctctctgtgtgtgtctctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctctatgtgtgtgtgtgtgtgtgtct
>TU242103
TATAAAGTAGCTGAAATTAGCTCCACGTCAACCAGCTGTGATATTAGAATGCTGCATGAGTAATAATGTTCCAGTTATGATACAAATGATAATATATCACTctcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctctctctgtgtgtgtgtctctgtgtgtgtgtgtctctctctgtgtgtgtgtctctgtgtgtgtgtctctctgtgtctctgtgtgtgtgtgtgtgtgtctctctgtgtgtgtctctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctctatgtgtgtgtgtgtgtgtgtct
>TU242104
TATAAAGTAGCTGAAATTAGCTCCACGTCAACCAGCTGTGATATTAGAATGCTGCATGAGTAATAATGTTCCAGTTATGATACAAATGATAATATATCACTctcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242097 False 293 lncRNA 0.44 2 29742623 29750295
TU242100 True 637 TUCP 0.47 2 29742623 29744075
TU242102 False 436 lncRNA 0.46 3 29742623 29743330
TU242103 False 470 lncRNA 0.46 3 29742623 29743330
TU242104 False 229 lncRNA 0.42 2 29742623 29750295

Neighbor

gene id symbol gene type direction distance location
ckmt2a ckmt2 coding upstream 52315 29669572 ~ 29690308 (+)
LOC120544985 NA coding upstream 154983 29584043 ~ 29587640 (+)
oclna LOC103389949,LOC103373407 coding upstream 174374 29553358 ~ 29568249 (+)
marveld2a marveld2 coding upstream 194601 29535795 ~ 29548022 (+)
pi4kaa LOC104948040 coding upstream 215151 29474565 ~ 29527472 (+)
sec14l7 LOC103371288,LOC105915608,LOC104948033,LOC101066937,LOC106935672 coding downstream 81068 29831363 ~ 29841705 (+)
LOC120545067 cnnm4,LOC103473218,LOC107395816 coding downstream 96058 29846353 ~ 29882921 (+)
LOC120545406 cnnm3 coding downstream 145382 29895677 ~ 29925265 (+)
il1b NA coding downstream 201157 29951452 ~ 29965248 (+)
gnsb gns,LOC104931705,LOC103374629 coding downstream 311305 30061600 ~ 30088020 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding upstream 40784 29692438 ~ 29701839 (+)
G178728 NA non-coding upstream 197882 29544159 ~ 29544741 (+)
G178725 NA non-coding upstream 211264 29528425 ~ 29531359 (+)
G178710 NA non-coding upstream 284087 29445053 ~ 29458536 (+)
G178521 NA non-coding upstream 710261 29031515 ~ 29032362 (+)
G178847 NA non-coding downstream 22025 29772320 ~ 29790111 (+)
G178848 NA non-coding downstream 22356 29772651 ~ 29773165 (+)
G178858 NA non-coding downstream 52002 29802297 ~ 29803683 (+)
G178854 NA non-coding downstream 89541 29839836 ~ 30106722 (+)
G178851 NA non-coding downstream 140050 29890345 ~ 29893184 (+)
rasgrf2a NA other upstream 75392 29601531 ~ 29667231 (+)
G178529 NA other upstream 650297 29084949 ~ 29092326 (+)
ptpn11a ptpn11 other upstream 659612 29006621 ~ 29083011 (+)
G178506 NA other upstream 797179 28944507 ~ 28945444 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 1154591 28580268 ~ 28588032 (+)
LOC120545429 LOC104948058 other downstream 43509 29793804 ~ 29795825 (+)
G178881 NA other downstream 271024 30021319 ~ 30022217 (+)
zmiz2 zmiz2 other downstream 509071 30259366 ~ 30310894 (+)
LOC120545414 LOC106676976 other downstream 573817 30324112 ~ 30331614 (+)
G179407 NA other downstream 1637452 31387747 ~ 31480094 (+)

Expression


Co-expression Network