G178521


Basic Information

Item Value
gene id G178521
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29031515 ~ 29032362 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241671
TCTTCTTATTTTTGTTCTTGTCGTCCGATTTGGGCTCCGTCACCGGCACCCACTTGTAGATGCGAAGGGACGTGTCTCCAACCGTCACCCATTTCTTCTCCCtgtgaaggagagaaaaaacaagCTGACTCAGCGGCTCAGAGTCCCCAAACAGCGCAGACACTGTGAAGCAGCTCCCTGGCACAAACAACTGTAGTAATTCTATAAATTAGGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241671 True 216 lncRNA 0.50 2 29031515 29032362

Neighbor

gene id symbol gene type direction distance location
clip1b LOC103361300 coding upstream 12744 28981477 ~ 29018771 (+)
LOC120545038 denr,LOC100690406,LOC101472698,LOC103375039,LOC102800030 coding upstream 50145 28979028 ~ 28981370 (+)
denr denr coding upstream 52588 28971400 ~ 28978927 (+)
kmt5aa LOC104947636,LOC103369788,LOC104940038 coding upstream 127196 28897490 ~ 28904319 (+)
LOC120546066 LOC103369939,LOC102300272,LOC101486468,LOC102201162 coding upstream 263112 28754208 ~ 28768403 (+)
eif2b1 eif2b1 coding downstream 4707 29037069 ~ 29045131 (+)
rph3aa LOC104964590,LOC107086068,LOC102797992,LOC103361309 coding downstream 75854 29108216 ~ 29159101 (+)
pla2g3 NA coding downstream 131870 29164232 ~ 29176814 (+)
ttc28 NA coding downstream 147450 29179812 ~ 29346058 (+)
pitpnb LOC108247152,LOC107396064,LOC101477519,LOC106533593,LOC104948049,LOC103370350,LOC101162302 coding downstream 314407 29346769 ~ 29373529 (+)
G178491 NA non-coding upstream 123144 28904473 ~ 28908371 (+)
G178468 NA non-coding upstream 182632 28846471 ~ 28848883 (+)
G178460 NA non-coding upstream 199185 28828109 ~ 28832330 (+)
G178441 NA non-coding upstream 330109 28658485 ~ 28701406 (+)
G178439 NA non-coding upstream 390647 28640288 ~ 28640868 (+)
G178710 NA non-coding downstream 412691 29445053 ~ 29458536 (+)
G178725 NA non-coding downstream 496063 29528425 ~ 29531359 (+)
G178728 NA non-coding downstream 511797 29544159 ~ 29544741 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding downstream 660076 29692438 ~ 29701839 (+)
G178847 NA non-coding downstream 739958 29772320 ~ 29790111 (+)
G178506 NA other upstream 86071 28944507 ~ 28945444 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 443483 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 459120 28567146 ~ 28572395 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 1333583 27656536 ~ 27697932 (+)
erbin erbin other upstream 1965809 27012889 ~ 27065706 (+)
G178529 NA other downstream 52587 29084949 ~ 29092326 (+)
rasgrf2a NA other downstream 569169 29601531 ~ 29667231 (+)
G178845 NA other downstream 710261 29742623 ~ 29750295 (+)
LOC120545429 LOC104948058 other downstream 761442 29793804 ~ 29795825 (+)
G178881 NA other downstream 988957 30021319 ~ 30022217 (+)

Expression


Co-expression Network