kmt5aa (LOC104947636,LOC103369788,LOC104940038)


Basic Information

Item Value
gene id kmt5aa
gene name LOC104947636,LOC103369788,LOC104940038
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 28897490 ~ 28904319 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779115.1
CTCCGTCTACATCATTTACATGAAGAAAAATGGCGGAGAGGAGCTGTGGAGGCTGCATCGGTTGAGCTGCTGGCAGTTTAAACAACAACAGCGGGGCACACGGTCACCCTGGATCGGGGCCGGAGTGTACGGAGGGCACTGCCGTACGAGCAGGGCGAGGATAATCTCTGAACCGGCGGACACATTCGCTCATTCTTTGTCCTGGAAACGAGAGAGCCGAGCGGAGAGCCACGAAAACAAGTCGGACATGAACGGGGAGATTGTATGCAATAGCCAATCAGTCACTGTCTTAAGCTGCACAAACTCCATATCACCAGTTCACGATGAAATCAAGCTGACACAGCAGGGACGGTGCTCTCCAATATGCTTCCAGCAAAATAATGCTCAGAGGCAGGGAGAGGGCAGGAGAACAAACCCCATCAGCACTACACCGAAACACTCCAAGACTAGTTTCCCGGAGATGGAGAGCAGCTACAGCCAGTGTTCACCCTGCTGGTCAGATGATCAGCCATCGCCTCCGCAGCTCCACTGCGCTCAGAACTGCCTTCGTTCCCCCACCGAACTCCCCCTGCGCGACAGCTTTTCTCACGCTCCCCTCCTCGCCGCCAACAACAACGGCAGCACTCTTCACAGCCACCAGAGGAGAGGCGTCCGCCTCAAACCCAAAGGAAAGAAATCCACAATAAGAATTGCAGGCGGAAAAAACTCCCAAAACCGAAAAGTTACCGACTACTACCCAATAAGAAGAAGCTCaagaaaaagtaaaacagaGATTGAGTGTGAAGAAAAGAAGCTCATAGATGATCTCATCACAAAGGGAATAGAAGAAGGAATGGAGGTGCAGCACATAGAAGGAAAGGGGAGAGCAGTGTTCGCCACGCGGTGTTTCCAGAAAGGCGAGTACGTGGTGGAGTACCACGGAGACCTGCTGCAGATCACCGACGCCAAAAAGAGGGAGGCTGAATACGCTCTCAACCCTGCCACTGGCTGCTACATGTACTACTTCCAGTACCTCTGCAAAACTTACTGTGTGGACGCAACAAAAGAGACTGGTCGAATGGGTAGGTTGATAAATCACAGTAAAACCGGAAACTGCCAAACCAAACTCCACGACATCAACGGGGTCCCTCACCTCATCCTCGTCGCCTCTCGAGACATCGACGAAGGCGAGGAGTTGCTCTATGACTACGGAGACCGCAGCAAAGCCTCCATCGCAGCTCACCCGTGGCTCAAATATTGATCCTTCGAGaatgaatgagaaaaaaaaagaaa

Function

NR:

description
PREDICTED: N-lysine methyltransferase SETD8-A-like

GO: NA

KEGG:

id description
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779115.1 True 1272 mRNA 0.52 7 28897490 28904319

Neighbor

gene id symbol gene type direction distance location
LOC120546066 LOC103369939,LOC102300272,LOC101486468,LOC102201162 coding upstream 129087 28754208 ~ 28768403 (+)
zswim6 LOC103369940,LOC100698789 coding upstream 179240 28670320 ~ 28718250 (+)
LOC120544911 NA coding upstream 265661 28608809 ~ 28631829 (+)
mat2al LOC103371477,LOC108250364,LOC100699062,LOC102202437,LOC101466580,LOC102780929 coding upstream 289608 28595400 ~ 28607882 (+)
LOC120545217 NA coding upstream 333373 28556910 ~ 28564117 (+)
denr denr coding downstream 67081 28971400 ~ 28978927 (+)
LOC120545038 denr,LOC100690406,LOC101472698,LOC103375039,LOC102800030 coding downstream 74709 28979028 ~ 28981370 (+)
clip1b LOC103361300 coding downstream 77158 28981477 ~ 29018771 (+)
eif2b1 eif2b1 coding downstream 132750 29037069 ~ 29045131 (+)
rph3aa LOC104964590,LOC107086068,LOC102797992,LOC103361309 coding downstream 203897 29108216 ~ 29159101 (+)
G178468 NA non-coding upstream 48607 28846471 ~ 28848883 (+)
G178460 NA non-coding upstream 65160 28828109 ~ 28832330 (+)
G178441 NA non-coding upstream 196084 28658485 ~ 28701406 (+)
G178439 NA non-coding upstream 256622 28640288 ~ 28640868 (+)
G178435 NA non-coding upstream 302558 28594592 ~ 28594932 (+)
G178491 NA non-coding downstream 154 28904473 ~ 28908371 (+)
G178521 NA non-coding downstream 127196 29031515 ~ 29032362 (+)
G178710 NA non-coding downstream 540734 29445053 ~ 29458536 (+)
G178725 NA non-coding downstream 624106 29528425 ~ 29531359 (+)
G178728 NA non-coding downstream 639840 29544159 ~ 29544741 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 309458 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 325095 28567146 ~ 28572395 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 1199558 27656536 ~ 27697932 (+)
erbin erbin other upstream 1831784 27012889 ~ 27065706 (+)
nln nln other upstream 1886041 27002459 ~ 27011449 (+)
G178506 NA other downstream 40188 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 102302 29006621 ~ 29083011 (+)
G178529 NA other downstream 180630 29084949 ~ 29092326 (+)
rasgrf2a NA other downstream 697212 29601531 ~ 29667231 (+)
G178845 NA other downstream 838304 29742623 ~ 29750295 (+)

Expression


Co-expression Network