G178491


Basic Information

Item Value
gene id G178491
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 28904473 ~ 28908371 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241615
CCACACTTCGATTAATGTCTCTCTGCCTTGTCAGAGGacatatgtatttttatttatgtgtatatgAAACATTCTGGTTGTTTTGCAGCACATTtcttttgtacattttgtattaCAATGCTTCTACCAGCATGCAGGTAGTAGTTAATGCTCTGCATTTTTATACGTTTTTCTTAATTCGTAGTAGTTACAAACTTAGCAATACTTACAAGGCCCCAGAGCCCTCTTTCTTCGGTCGGCAAGATCTGTGAGATGCAAACTACAAAATATATGTTCTGTTCAAGTGGAATTTGATTTCAGCCATCAGAACTCACACAACCTACCGTTGTTTAGTGGAAGTTTAATAGTTTACCAAACTCATGGTTCACTCTGCATTTTTGGGGTCTTAATTACAAAGAAACGGTGATGTGACTGACACTGGGTCGAAGTATTCCTGTTGTACAGACTTTAAAGATTAGATAGAAATACAGAAAATAGTCCGtagtttttctctctttttttttttcttccatgctttatttttaacctatattgtattttttaataatgaatTAATATGCGCAACACACTTGAATTATCATGTAGTGAAGTTTGTTGCAAATACCTTTACAGTATCTTCTGCTGtgtctctaaatacaaatgtataTTGAAGTTTCTTAGGTAAAGATTTACTAATATAAATAGaatcaaataattaaaagacGGTTTAAATTTCTCCCTGACTGGCCGACATGATTGTCTAGGCGGCGTACTGGTAATTTCACTTTCAATTTAGATTCTTCACTGTCTGTATATCACAgcactatgtaaatatatttattggtTTGCTGTTGCAAAATCAAGGGCGGTTTAAAGGAAACgtgttgacatttttattttttttttcttcaccttCTTGCAAAGAGTAAAGTGTGCTCTATGCTTCTGTGTAAAATTGCCGCCGTGGCTACGTACATAGGTACTTGGAGACACAgcgaccctacgccgtagcctgacgtgcgcATCTCAAAAACTGTTCGTACACGTCGCGGTGACGCGCGgcgcttggtagcgttgcatttcctggttctcctcctccataaacaacgtgaaatcaaggagagggttaacttttcctgcttcagatttcccaccgtggtcagaaaacacaggggagacactttggttctcccactaggactctagagtcgctactcgctccgaagataATCACAgtcactctcacttctccctcgctctaccacacacacacacaagcgcacaagtataaacatcaggcctcttacgtaggctacggcgaaagcttaACAAACAACCCATTTAATGAAAACTGTCTCCACTTCTGTGAACATGTGTAAAGTTTAATCATAAAGCTATGACCaaataatttgatttaaaaaaaaaaaaaaaaaaaaatgttccagCTTCGTCTTGATGAACATTTGTACATCCAATCAAATAAAAAGTAGCTCAATCGCGTGTAAAACTGTTGTTTTGGGACCGAGCCTAATGCtacctttatgctaagctaagctaactcaTTACCTCCCTGAAGTAGCTTTGAATTTAACCGGCAGATATGAGGGTGGTGTCGCTCTTCTCGAAAGGGAGGATGTGCGTTTCCCAAAACGTCGAGCTCTTCCTTTTAAAGACTTGACGACAACAACGCCAGGTTAAAGCGTCCGCTGGGAATTTGTCAAACATTTTATGTTGTATGTACACACAACACCAGCCTCTCCAACACGTGTACCACGTCTGTGGTGAACAGTGGCACTCCTTCTGTATATTTAAGGTCTTTGCAGGTTTTCTACACATCACGCTCACTAAATATTATTCATTTTCTTCCATGTGAAATTTGTATTGACAGCTGAACCGCAAACAGGTCATTCTTTTACTTTAAGTAgctttttttgaaatgtttttttttttttttcaattgtagCCAGAAAGTCAAATATAACCCCAAATAATTCTCCCTTTTATCTTATCTTGATTTGTGTTTGATTTTCCCTCATTGAGAACATGACTAAAATGACCAAATTGTTATAGCTAATTAGTTACAAGTATattcagtatttttatttttttaaagaagagtTCCACTTCTTCTTTTTCCCGATCCAAACACATAAATCACAGTGGCACCTAATATATCTAATTTAGAATACagtattgtaataataatagcaTTACTTTTGGTCAAGTCACTTAATTACATTCATTATAAATTCATGTACCACAGAAAAAAGGGCACGTGCAGTGCAGCAATTGTGATTTTGAACAATGGACAGCTAACAAGTGAATTTGTCACCTGAAAGTGTTCAAATTAGAATAATAAATCAGTTTTAAAGCATTAAGCGTGGCgatattctacatttttggaacagtcaacaaatcccataaaaAGACCCAATCCAACAATGCGTCTCTTTAAAAAGTCCGTGatttgtagggctgggtaccgataCCGTTAACTCCATACCGGTTCCTGGACGATACCTGAACATTATACATTATGGGaaacattttctatttttaaacattgtttttatttttatataaaataaaactcagaATGTTAACTCCTCTTCACctcaagcaacaacaaaaacaggtcTTATACTGTATAGTaatctgctgattttcattctggatcagaTGAAAATGTTCTGCAGATTCCACCTGGTTCCGTTAATCACTTTTCATAGCATTgtaactatttttttattttattgtacagCACTTTCTCTTATGTTACATTTGTATTATTGCTCTTAAATtacaatagatttttttttattagtttggtATTTTGGGGCTTTGACTTAGAGGAATAGTTGGACGTTTTTGGGGTTATTATGCCTACTTGtcgagagttagatgaaaagacGAGACCACtcatATCTGAGAGTGGTGTCGGTCTTCTCATCTAACGCTCTGCAAGAAAGGGAGGCTGTgcgtttcccaaaatgtcgaacaATCAAActtattttaaaacaatgtaCCAAATATAATACATCACGCCTCGATACATCTCTGTGGCGGTTTAGTTTGTACAGAGTTTCCATTAAAAGTGTTCACAAATCATGAAAGATCTTAACGTTTCCAAAATATTCAGTATATTATTGAATGATTCCTTCATTGCCGGTTTTAATGTTATTAAAATACCACGAAGAAACGCATCATCTGTGTTATATAAATGCTGTGCAATATATCTACATGTGCGATAAAGTAAAACCCATTTACATTTTGACCTTTCTAACAGTAGCATTGTGTTACATGTGTGACATGTTTTCATGTGAGCCTTTTTCTTAACATTTCTGAATTATtcctttcttgtttttttactgtaaatgtagaACTAATGGAATAATACCAGAAGGGGCAAAAGCTGACCGGTTGGCCATTTTGGGACATAATAGATCTTTGCTGTTGTAGCGTTGAATAAATCTTAATGCTGGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241615 True 3464 lncRNA 0.36 2 28904473 28908371

Neighbor

gene id symbol gene type direction distance location
kmt5aa LOC104947636,LOC103369788,LOC104940038 coding upstream 154 28897490 ~ 28904319 (+)
LOC120546066 LOC103369939,LOC102300272,LOC101486468,LOC102201162 coding upstream 136070 28754208 ~ 28768403 (+)
zswim6 LOC103369940,LOC100698789 coding upstream 186223 28670320 ~ 28718250 (+)
LOC120544911 NA coding upstream 272644 28608809 ~ 28631829 (+)
mat2al LOC103371477,LOC108250364,LOC100699062,LOC102202437,LOC101466580,LOC102780929 coding upstream 296591 28595400 ~ 28607882 (+)
denr denr coding downstream 63029 28971400 ~ 28978927 (+)
LOC120545038 denr,LOC100690406,LOC101472698,LOC103375039,LOC102800030 coding downstream 70657 28979028 ~ 28981370 (+)
clip1b LOC103361300 coding downstream 73106 28981477 ~ 29018771 (+)
eif2b1 eif2b1 coding downstream 128698 29037069 ~ 29045131 (+)
rph3aa LOC104964590,LOC107086068,LOC102797992,LOC103361309 coding downstream 199845 29108216 ~ 29159101 (+)
G178468 NA non-coding upstream 55590 28846471 ~ 28848883 (+)
G178460 NA non-coding upstream 72143 28828109 ~ 28832330 (+)
G178441 NA non-coding upstream 203067 28658485 ~ 28701406 (+)
G178439 NA non-coding upstream 263605 28640288 ~ 28640868 (+)
G178435 NA non-coding upstream 309541 28594592 ~ 28594932 (+)
G178521 NA non-coding downstream 123144 29031515 ~ 29032362 (+)
G178710 NA non-coding downstream 536682 29445053 ~ 29458536 (+)
G178725 NA non-coding downstream 620054 29528425 ~ 29531359 (+)
G178728 NA non-coding downstream 635788 29544159 ~ 29544741 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding downstream 784067 29692438 ~ 29701839 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 316441 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 332078 28567146 ~ 28572395 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 1206541 27656536 ~ 27697932 (+)
erbin erbin other upstream 1838767 27012889 ~ 27065706 (+)
nln nln other upstream 1893024 27002459 ~ 27011449 (+)
G178506 NA other downstream 36136 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 98250 29006621 ~ 29083011 (+)
G178529 NA other downstream 176578 29084949 ~ 29092326 (+)
rasgrf2a NA other downstream 693160 29601531 ~ 29667231 (+)
G178845 NA other downstream 834252 29742623 ~ 29750295 (+)

Expression


Co-expression Network