G178728


Basic Information

Item Value
gene id G178728
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29544159 ~ 29544741 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241959
gtgagacatctcacttctgttccatctttgttgggagtcgcacatgctcagtacctaggtaaggactactagccagtcagaagcagagtatgagggtgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaagaactactagccagtcagaagcagagtttgagggcgagcattataacatgtgttccaaagtgaccatgtctgtctctgaagtaaaggctggactacaatagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtccctttgggggggactttgggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241959 True 351 lncRNA 0.49 2 29544159 29544741

Neighbor

gene id symbol gene type direction distance location
pi4kaa LOC104948040 coding upstream 16687 29474565 ~ 29527472 (+)
slc25a1b LOC101069509,LOC103373622,LOC106568272 coding upstream 71184 29460509 ~ 29472975 (+)
tor4aa tor4a coding upstream 103123 29430110 ~ 29441036 (+)
LOC120546010 brap,LOC102795910 coding upstream 115977 29412197 ~ 29428182 (+)
naa25 naa25 coding upstream 132622 29377691 ~ 29411537 (+)
oclna LOC103389949,LOC103373407 coding downstream 8617 29553358 ~ 29568249 (+)
LOC120544985 NA coding downstream 39302 29584043 ~ 29587640 (+)
ckmt2a ckmt2 coding downstream 124831 29669572 ~ 29690308 (+)
zfyve16 LOC101158542,LOC107104482,LOC106569324 coding downstream 195691 29740432 ~ 29790668 (+)
sec14l7 LOC103371288,LOC105915608,LOC104948033,LOC101066937,LOC106935672 coding downstream 286622 29831363 ~ 29841705 (+)
G178725 NA non-coding upstream 12800 29528425 ~ 29531359 (+)
G178710 NA non-coding upstream 85623 29445053 ~ 29458536 (+)
G178521 NA non-coding upstream 511797 29031515 ~ 29032362 (+)
G178491 NA non-coding upstream 635788 28904473 ~ 28908371 (+)
G178468 NA non-coding upstream 695276 28846471 ~ 28848883 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding downstream 147697 29692438 ~ 29701839 (+)
G178847 NA non-coding downstream 227579 29772320 ~ 29790111 (+)
G178848 NA non-coding downstream 227910 29772651 ~ 29773165 (+)
G178858 NA non-coding downstream 257556 29802297 ~ 29803683 (+)
G178854 NA non-coding downstream 295095 29839836 ~ 30106722 (+)
G178529 NA other upstream 451833 29084949 ~ 29092326 (+)
ptpn11a ptpn11 other upstream 461148 29006621 ~ 29083011 (+)
G178506 NA other upstream 598715 28944507 ~ 28945444 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 956127 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 971764 28567146 ~ 28572395 (+)
rasgrf2a NA other downstream 56790 29601531 ~ 29667231 (+)
G178845 NA other downstream 197882 29742623 ~ 29750295 (+)
LOC120545429 LOC104948058 other downstream 249063 29793804 ~ 29795825 (+)
G178881 NA other downstream 476578 30021319 ~ 30022217 (+)
zmiz2 zmiz2 other downstream 714625 30259366 ~ 30310894 (+)

Expression


Co-expression Network