mat2al (LOC103371477,LOC108250364,LOC100699062,LOC102202437,LOC101466580,LOC102780929)


Basic Information

Item Value
gene id mat2al
gene name LOC103371477,LOC108250364,LOC100699062,LOC102202437,LOC101466580,LOC102780929
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 28595400 ~ 28607882 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778780.1
ttatttaatttaattaagcTCATGGATGTATGAAGGGTATTAAGAGATTAAGCTTTCAGCGCCATCTTGAGGCTGTCCGTGCTGCTGCCTGAAAGACTTCCACTTGTAAACATCCTCGTTCAGCAGCTCACAGCCGTTTACAGAAAACCCACCGAAAAGATGAGTACTTAAATGTGTGTATTCATAAgactatttattttaataattatttcaaACAACCTCATACGACTACCAGCGAGACGTTGCATCGGTTGTTTTCCGTTAAACCCGCCTGTCTTAAATCGACTTTACTAACAGTTAAAATCAGGCAAACATCCAACCGAGCAGTCTACGCTTCACATGCTTCTTAGCTCAGCCGTCATAGTTAATTATTGCTTATTATAATCGGTGTCGGCGGACGTCAGAAGGTACTTTCACTTAAAGTGCAACGGTGCCGTTTATTCGGTTAAATTCAACTTCCCTGCACCGACCAACGAGCTGAAGATGAATCCGAGCGGAGCAGCCCGCAGCGGGAAGACTTTCCTGTTCACATCCGAGTCTGTTGGAGAGGGACACTCCGATAAAATGTGTGACCAGATCAGTGATGCTGTGCTTGATGCGTACCTGAGTCAAGACCCCGACTCTAAAGTGGCTTGTGAATGTGTGGCGAAGACGGGCATGATTTTACTGGTCGGAGAAGTGACGTCTAAAGCCATCGTGGATCTCCAGTCAGTGGTCCGAAATACTGTGAAGAAGATTGGCTATGATGACTCGTCAAAAGGTTTTGACTATAAGACCTGCAATGTGCTGGTGGCGCTGGAGCCGCAGGCTGTGGAGATATCGGACTGTGTGTTTGAAGGCAGGGATCAGGAGGACATCGGTGCAGGGGACCAGGGTTTGATGTTCGGCTACGCCACGGACGAGACCGATGAGTGCATGCCCTTAACCATCATTCTGGCTCACAAACTGAACTACAGGATGAAGGAGCTCTCGCTGAACGGAGAGTGTCCTTGGATACGACCGGACTCCAAATCACAAGTCACAGTGGAGTATAGAGACAACATGGGAGCCATGGAGCCGATGCGCGTTCACACTGTGGTCATCTCCGTACAACACAGCCCGGACATCACCCTGGAGGAGATCAGACGCAATCTGATAGAGAAGGTGGTGAAGCTCGTCATTCCCGCCAAGTACTTGGATGACAAGACCATCTACCATCTGCTGCCAAGCGGGAAATTCCTTACGGGTGGCCCGCAGAGCGATGCAGGACTCACAGGGCGTAAAATCATAGTGGACACATACGGAGGATGGGGTGGTCACGGAGGAGGGGCTTTCTCCGGAAAAGACTACTCCAAAGTGGATCGGTCCGGAGCTTATGCGGCACGCTGGGTCGCCAAGTCTTTGGTCAAAGCCGGACTGTGCAGGAGAGCCCTCGTTCAGATCTCCTATGCGATCGGTGTGAGCCAcccactctccatctctgtgtTTCACTACGGCTCGTCGAACAGGGACGAAGACGAGCTGCTGCAAATAGTACAAAAGAACTTTGACCTGAGGCCCGGGGTCATTGTGAAAGAGCTGGGTTTGAAGCGGCCAATCTACCAGGCCACTGCCTGCTACGGTCACTTTGGCAGAGAGGAGTTCCCCTGGGAAAAACCAAAGTCTCTGGTGTTTTGAGCTCCAATCCCATTCCAGTCATGTCCTAACAACCAGTCGTGAAACAATCAAGAGTCACTGAATCCATATATCTAAATACGACAGAGATGTTTTTCTCTGACCTCAAACTGTAGGGCAGTGGTCAGTGCCTTTTGTGAGAAatgaatttagatttttttttatcatgattGAGCTACTTTCCTGTATGAGAAACTGTACTTATTGTTAAAAAGAAATGATGCAATCAATGTGATTTTTGAATATCAAGGAAGAATTGTCAGATTCTGTGAAATGTATAAAAATCATGCATTTTGGTAACttgtaataaataatatttggtGATTGAAACGCTG

Function

NR:

description
S-adenosylmethionine synthase-like

GO: NA

KEGG:

id description
K00789 metK; S-adenosylmethionine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778780.1 True 1988 mRNA 0.47 9 28595400 28607882

Neighbor

gene id symbol gene type direction distance location
LOC120545217 NA coding upstream 31283 28556910 ~ 28564117 (+)
sec31a sec31a coding upstream 43451 28526507 ~ 28551949 (+)
lin54 lin54 coding upstream 75527 28504277 ~ 28519873 (+)
LOC120545644 plac8,LOC106528717 coding upstream 102364 28490614 ~ 28493036 (+)
LOC120545883 plac8,LOC106528717 coding upstream 131387 28461584 ~ 28464013 (+)
LOC120544911 NA coding downstream 927 28608809 ~ 28631829 (+)
zswim6 LOC103369940,LOC100698789 coding downstream 62438 28670320 ~ 28718250 (+)
LOC120546066 LOC103369939,LOC102300272,LOC101486468,LOC102201162 coding downstream 146326 28754208 ~ 28768403 (+)
kmt5aa LOC104947636,LOC103369788,LOC104940038 coding downstream 289608 28897490 ~ 28904319 (+)
denr denr coding downstream 363518 28971400 ~ 28978927 (+)
G178435 NA non-coding upstream 468 28594592 ~ 28594932 (+)
G178426 NA non-coding upstream 41299 28552827 ~ 28554101 (+)
LOC120545668 NA non-coding upstream 70560 28522284 ~ 28524840 (+)
G178348 NA non-coding upstream 383808 28211159 ~ 28211592 (+)
G178267 NA non-coding upstream 655652 27938904 ~ 27939748 (+)
G178439 NA non-coding downstream 32406 28640288 ~ 28640868 (+)
G178441 NA non-coding downstream 50603 28658485 ~ 28701406 (+)
G178460 NA non-coding downstream 220227 28828109 ~ 28832330 (+)
G178468 NA non-coding downstream 238589 28846471 ~ 28848883 (+)
G178491 NA non-coding downstream 296591 28904473 ~ 28908371 (+)
LOC120544907 hnrnpd,LOC104960871 other upstream 7368 28580268 ~ 28588032 (+)
LOC120545218 NA other upstream 23005 28567146 ~ 28572395 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 897468 27656536 ~ 27697932 (+)
erbin erbin other upstream 1529694 27012889 ~ 27065706 (+)
nln nln other upstream 1583951 27002459 ~ 27011449 (+)
G178506 NA other downstream 336625 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 398739 29006621 ~ 29083011 (+)
G178529 NA other downstream 477067 29084949 ~ 29092326 (+)
rasgrf2a NA other downstream 993649 29601531 ~ 29667231 (+)
G178845 NA other downstream 1134741 29742623 ~ 29750295 (+)

Expression


Co-expression Network