Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545668 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 28522284 ~ 28524840 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241519 | False | 415 | lncRNA | 0.42 | 3 | 28522293 | 28524832 |
| XR_005636721.1 | True | 432 | lncRNA | 0.42 | 3 | 28522284 | 28524840 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lin54 | lin54 | coding | upstream | 2411 | 28504277 ~ 28519873 (+) |
| LOC120545644 | plac8,LOC106528717 | coding | upstream | 29248 | 28490614 ~ 28493036 (+) |
| LOC120545883 | plac8,LOC106528717 | coding | upstream | 58271 | 28461584 ~ 28464013 (+) |
| cwc27 | cwc27 | coding | upstream | 147117 | 28346148 ~ 28375167 (+) |
| trim23 | trim23,LOC102785252 | coding | upstream | 183970 | 28327180 ~ 28338314 (+) |
| sec31a | sec31a | coding | downstream | 1667 | 28526507 ~ 28551949 (+) |
| LOC120545217 | NA | coding | downstream | 32070 | 28556910 ~ 28564117 (+) |
| mat2al | LOC103371477,LOC108250364,LOC100699062,LOC102202437,LOC101466580,LOC102780929 | coding | downstream | 70560 | 28595400 ~ 28607882 (+) |
| LOC120544911 | NA | coding | downstream | 83969 | 28608809 ~ 28631829 (+) |
| zswim6 | LOC103369940,LOC100698789 | coding | downstream | 145480 | 28670320 ~ 28718250 (+) |
| G178348 | NA | non-coding | upstream | 310692 | 28211159 ~ 28211592 (+) |
| G178267 | NA | non-coding | upstream | 582536 | 27938904 ~ 27939748 (+) |
| G178266 | NA | non-coding | upstream | 589265 | 27932818 ~ 27933019 (+) |
| G178256 | NA | non-coding | upstream | 708406 | 27813483 ~ 27813878 (+) |
| G178210 | NA | non-coding | upstream | 816221 | 27702859 ~ 27706063 (+) |
| G178426 | NA | non-coding | downstream | 27987 | 28552827 ~ 28554101 (+) |
| G178435 | NA | non-coding | downstream | 69752 | 28594592 ~ 28594932 (+) |
| G178439 | NA | non-coding | downstream | 115448 | 28640288 ~ 28640868 (+) |
| G178441 | NA | non-coding | downstream | 133645 | 28658485 ~ 28701406 (+) |
| G178460 | NA | non-coding | downstream | 303269 | 28828109 ~ 28832330 (+) |
| lhfpl2a | lhfpl2,LOC101175333 | other | upstream | 824352 | 27656536 ~ 27697932 (+) |
| erbin | erbin | other | upstream | 1456578 | 27012889 ~ 27065706 (+) |
| nln | nln | other | upstream | 1510835 | 27002459 ~ 27011449 (+) |
| LOC120545040 | LOC103353292 | other | upstream | 1591990 | 26727810 ~ 26930294 (+) |
| LOC120546038 | NA | other | upstream | 1907325 | 26586647 ~ 26614959 (+) |
| LOC120545218 | NA | other | downstream | 42306 | 28567146 ~ 28572395 (+) |
| LOC120544907 | hnrnpd,LOC104960871 | other | downstream | 55428 | 28580268 ~ 28588032 (+) |
| G178506 | NA | other | downstream | 419667 | 28944507 ~ 28945444 (+) |
| ptpn11a | ptpn11 | other | downstream | 481781 | 29006621 ~ 29083011 (+) |
| G178529 | NA | other | downstream | 560109 | 29084949 ~ 29092326 (+) |
