G178348


Basic Information

Item Value
gene id G178348
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 28211159 ~ 28211592 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241421
cctgacagtagggaattacaatagtccagcctggaagtaataaatgcatggactagtttttttcagcgtcgttttgagacaggatattcctaattttggcaatgttacgaagatgaaaaaaggctgttcttaaggtttgttttagattggcattaaaggatatatcctgatcaaagataactcctaaatttctaacagtggtgctggaggccagggcaacaccatccagagtagctatatctttagataatgaagttcagaggtgtttagggcccagcacaataacttcagttttgttagggtttaacatcagaaaattataggtcatccaggattttatatccttaatgcacgcttgaaatttagctagctgactggtttcgtctggtttgattgacaagtataattgggtgtcatccgcataacagtgaaag

Function

GO: NA

KEGG:

id description
ko04360 Axon guidance

RNA

RNA id representative length rna type GC content exon number start site end site
TU241421 True 434 lncRNA 0.38 1 28211159 28211592

Neighbor

gene id symbol gene type direction distance location
LOC120546064 gcnt4,LOC103373574 coding upstream 3202 28204951 ~ 28207957 (+)
LOC120545370 LOC103373575 coding upstream 22302 28157821 ~ 28188857 (+)
LOC120545491 LOC104964569 coding upstream 152920 28053954 ~ 28058239 (+)
ch25hl2 LOC103367457,LOC102290525 coding upstream 213500 27995837 ~ 27997659 (+)
LOC120544969 crhbp coding upstream 244725 27960326 ~ 27966434 (+)
trim23 trim23,LOC102785252 coding downstream 115588 28327180 ~ 28338314 (+)
cwc27 cwc27 coding downstream 134556 28346148 ~ 28375167 (+)
LOC120545883 plac8,LOC106528717 coding downstream 249992 28461584 ~ 28464013 (+)
LOC120545644 plac8,LOC106528717 coding downstream 279022 28490614 ~ 28493036 (+)
lin54 lin54 coding downstream 292685 28504277 ~ 28519873 (+)
G178267 NA non-coding upstream 271411 27938904 ~ 27939748 (+)
G178266 NA non-coding upstream 278140 27932818 ~ 27933019 (+)
G178256 NA non-coding upstream 397281 27813483 ~ 27813878 (+)
G178210 NA non-coding upstream 505096 27702859 ~ 27706063 (+)
G178205 LOC103362269,LOC105918759 non-coding upstream 602946 27607480 ~ 27608213 (+)
LOC120545668 NA non-coding downstream 310692 28522284 ~ 28524840 (+)
G178426 NA non-coding downstream 341235 28552827 ~ 28554101 (+)
G178435 NA non-coding downstream 383000 28594592 ~ 28594932 (+)
G178439 NA non-coding downstream 428696 28640288 ~ 28640868 (+)
G178441 NA non-coding downstream 446893 28658485 ~ 28701406 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 513227 27656536 ~ 27697932 (+)
erbin erbin other upstream 1145453 27012889 ~ 27065706 (+)
nln nln other upstream 1199710 27002459 ~ 27011449 (+)
LOC120545040 LOC103353292 other upstream 1280865 26727810 ~ 26930294 (+)
LOC120546038 NA other upstream 1596200 26586647 ~ 26614959 (+)
LOC120545218 NA other downstream 355554 28567146 ~ 28572395 (+)
LOC120544907 hnrnpd,LOC104960871 other downstream 368676 28580268 ~ 28588032 (+)
G178506 NA other downstream 732915 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 795029 29006621 ~ 29083011 (+)
G178529 NA other downstream 873357 29084949 ~ 29092326 (+)

Expression


Co-expression Network