G178256


Basic Information

Item Value
gene id G178256
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 27813483 ~ 27813878 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU241305
cgtagcttcccggccctgGCAAGTTTAATGAagaaaacatggaggaccacacatattcaaaatccaaatttcaggaacaagagtcttcttcttcgcccagataaaagaaaaaggagattgaaaagagcaagagaccggcatcatcagaaaaaagcgtgaaggctaccgtagctgtaatacgtactttgaactgcgtggcgcgagagagttgattgcgatatatgatctcaacgctagatgggagaaattcctacacattggacctttaatgttaGTCACAGGTAGTCATCATGTGGTGTGAAAGACATCAACCTACAATTACTTGATAACTACTTACTTTTGTAGAAAAGTTAGAGATGTGTGTCATCATAATTCCTCAATAAAAAATGATTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241305 True 396 lncRNA 0.40 1 27813483 27813878

Neighbor

gene id symbol gene type direction distance location
ap3b1a ap3b1,LOC104966876 coding upstream 29477 27720197 ~ 27784006 (+)
arsb arsb,LOC102799236 coding upstream 161394 27633737 ~ 27652089 (+)
dmgdh dmgdh coding upstream 182402 27610802 ~ 27631081 (+)
LOC120545398 homer1,LOC102798051 coding upstream 245374 27539440 ~ 27568109 (+)
pik3r1 pik3r1,LOC104930938,LOC103371488,LOC102795099,LOC105915567,LOC102216923 coding upstream 551881 27235532 ~ 27261602 (+)
tbca tbca coding downstream 15501 27829379 ~ 27844258 (+)
otpa otp,LOC107093773,LOC102789457 coding downstream 35787 27849665 ~ 27854808 (+)
wdr41 wdr41 coding downstream 53780 27867658 ~ 27880080 (+)
LOC120544969 crhbp coding downstream 146448 27960326 ~ 27966434 (+)
ch25hl2 LOC103367457,LOC102290525 coding downstream 181959 27995837 ~ 27997659 (+)
G178210 NA non-coding upstream 107420 27702859 ~ 27706063 (+)
G178205 LOC103362269,LOC105918759 non-coding upstream 205270 27607480 ~ 27608213 (+)
G178198 NA non-coding upstream 239805 27570553 ~ 27573678 (+)
G178166 tia1,LOC100703764,LOC102796970,LOC103362264,LOC101155125 non-coding upstream 289335 27516823 ~ 27524148 (+)
G178155 NA non-coding upstream 299575 27471911 ~ 27513908 (+)
G178266 NA non-coding downstream 118940 27932818 ~ 27933019 (+)
G178267 NA non-coding downstream 125026 27938904 ~ 27939748 (+)
G178348 NA non-coding downstream 397281 28211159 ~ 28211592 (+)
LOC120545668 NA non-coding downstream 708406 28522284 ~ 28524840 (+)
G178426 NA non-coding downstream 738949 28552827 ~ 28554101 (+)
lhfpl2a lhfpl2,LOC101175333 other upstream 115551 27656536 ~ 27697932 (+)
erbin erbin other upstream 747777 27012889 ~ 27065706 (+)
nln nln other upstream 802034 27002459 ~ 27011449 (+)
LOC120545040 LOC103353292 other upstream 883189 26727810 ~ 26930294 (+)
LOC120546038 NA other upstream 1198524 26586647 ~ 26614959 (+)
LOC120545218 NA other downstream 753268 28567146 ~ 28572395 (+)
LOC120544907 hnrnpd,LOC104960871 other downstream 766390 28580268 ~ 28588032 (+)
G178506 NA other downstream 1130629 28944507 ~ 28945444 (+)
ptpn11a ptpn11 other downstream 1192743 29006621 ~ 29083011 (+)
G178529 NA other downstream 1271071 29084949 ~ 29092326 (+)

Expression


Co-expression Network