Gene
RNA
| Item | Value |
|---|---|
| gene id | tbca |
| gene name | tbca |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 27829379 ~ 27844258 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| tbca | Predicted to enable tubulin binding activity. Predicted to be involved in protein folding and tubulin complex assembly. Predicted to act upstream of or within post-chaperonin tubulin folding pathway. Predicted to be located in cytoplasm and microtubule. Predicted to be active in cytosol and microtubule cytoskeleton. Orthologous to human TBCA (tubulin folding cofactor A). |
| description |
|---|
| tubulin-specific chaperone A |
| id | name | namespace |
|---|---|---|
| GO:0007021 | tubulin complex assembly | biological_process |
| GO:0005874 | microtubule | cellular_component |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| K17292 | TBCA; tubulin-specific chaperone A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039780363.1 | True | 1297 | mRNA | 0.40 | 4 | 27829379 | 27844258 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ap3b1a | ap3b1,LOC104966876 | coding | upstream | 45373 | 27720197 ~ 27784006 (+) |
| arsb | arsb,LOC102799236 | coding | upstream | 177290 | 27633737 ~ 27652089 (+) |
| dmgdh | dmgdh | coding | upstream | 198298 | 27610802 ~ 27631081 (+) |
| LOC120545398 | homer1,LOC102798051 | coding | upstream | 261270 | 27539440 ~ 27568109 (+) |
| pik3r1 | pik3r1,LOC104930938,LOC103371488,LOC102795099,LOC105915567,LOC102216923 | coding | upstream | 567777 | 27235532 ~ 27261602 (+) |
| otpa | otp,LOC107093773,LOC102789457 | coding | downstream | 5407 | 27849665 ~ 27854808 (+) |
| wdr41 | wdr41 | coding | downstream | 23400 | 27867658 ~ 27880080 (+) |
| LOC120544969 | crhbp | coding | downstream | 116068 | 27960326 ~ 27966434 (+) |
| ch25hl2 | LOC103367457,LOC102290525 | coding | downstream | 151579 | 27995837 ~ 27997659 (+) |
| LOC120545491 | LOC104964569 | coding | downstream | 209696 | 28053954 ~ 28058239 (+) |
| G178256 | NA | non-coding | upstream | 15501 | 27813483 ~ 27813878 (+) |
| G178210 | NA | non-coding | upstream | 123316 | 27702859 ~ 27706063 (+) |
| G178205 | LOC103362269,LOC105918759 | non-coding | upstream | 221166 | 27607480 ~ 27608213 (+) |
| G178198 | NA | non-coding | upstream | 255701 | 27570553 ~ 27573678 (+) |
| G178166 | tia1,LOC100703764,LOC102796970,LOC103362264,LOC101155125 | non-coding | upstream | 305231 | 27516823 ~ 27524148 (+) |
| G178266 | NA | non-coding | downstream | 88560 | 27932818 ~ 27933019 (+) |
| G178267 | NA | non-coding | downstream | 94646 | 27938904 ~ 27939748 (+) |
| G178348 | NA | non-coding | downstream | 366901 | 28211159 ~ 28211592 (+) |
| LOC120545668 | NA | non-coding | downstream | 678026 | 28522284 ~ 28524840 (+) |
| G178426 | NA | non-coding | downstream | 708569 | 28552827 ~ 28554101 (+) |
| lhfpl2a | lhfpl2,LOC101175333 | other | upstream | 131447 | 27656536 ~ 27697932 (+) |
| erbin | erbin | other | upstream | 763673 | 27012889 ~ 27065706 (+) |
| nln | nln | other | upstream | 817930 | 27002459 ~ 27011449 (+) |
| LOC120545040 | LOC103353292 | other | upstream | 899085 | 26727810 ~ 26930294 (+) |
| LOC120546038 | NA | other | upstream | 1214420 | 26586647 ~ 26614959 (+) |
| LOC120545218 | NA | other | downstream | 722888 | 28567146 ~ 28572395 (+) |
| LOC120544907 | hnrnpd,LOC104960871 | other | downstream | 736010 | 28580268 ~ 28588032 (+) |
| G178506 | NA | other | downstream | 1100249 | 28944507 ~ 28945444 (+) |
| ptpn11a | ptpn11 | other | downstream | 1162363 | 29006621 ~ 29083011 (+) |
| G178529 | NA | other | downstream | 1240691 | 29084949 ~ 29092326 (+) |
