RNA id: TU241671


Basic Information

Item Value
RNA id TU241671
length 216
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G178521
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29031515 ~ 29032362 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCTTCTTATTTTTGTTCTTGTCGTCCGATTTGGGCTCCGTCACCGGCACCCACTTGTAGATGCGAAGGGACGTGTCTCCAACCGTCACCCATTTCTTCTCCCtgtgaaggagagaaaaaacaagCTGACTCAGCGGCTCAGAGTCCCCAAACAGCGCAGACACTGTGAAGCAGCTCCCTGGCACAAACAACTGTAGTAATTCTATAAATTAGGCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU241643 lncRNA upstream 86071 28944507 ~ 28945444 (+) False G178506
TU241615 lncRNA upstream 123144 28904473 ~ 28908371 (+) True G178491
TU241588 lncRNA upstream 182632 28846471 ~ 28848883 (+) True G178468
TU241578 lncRNA upstream 199185 28828109 ~ 28832330 (+) False G178460
TU241662 lncRNA downstream 28258 29060620 ~ 29082182 (+) False ptpn11a
TU241920 lncRNA downstream 412691 29445053 ~ 29458536 (+) True G178710
TU241945 lncRNA downstream 496063 29528425 ~ 29531359 (+) True G178725
TU241959 lncRNA downstream 511797 29544159 ~ 29544741 (+) True G178728
TU241973 lncRNA downstream 634416 29666778 ~ 29667208 (+) False rasgrf2a
XM_039778974.1 mRNA upstream 12744 28981477 ~ 29018771 (+) True clip1b
XM_039778973.1 mRNA upstream 12744 28981477 ~ 29018771 (+) False clip1b
XM_039778975.1 mRNA upstream 12744 28981477 ~ 29018771 (+) False clip1b
XM_039778976.1 mRNA upstream 50145 28979028 ~ 28981370 (+) True LOC120545038
XM_039778978.1 mRNA upstream 52588 28971400 ~ 28978927 (+) True denr
XM_039780303.1 mRNA downstream 4707 29037069 ~ 29045131 (+) True eif2b1
XM_039780318.1 mRNA downstream 27082 29059444 ~ 29082254 (+) False ptpn11a
XM_039780317.1 mRNA downstream 27083 29059445 ~ 29080240 (+) False ptpn11a
XM_039780319.1 mRNA downstream 27083 29059445 ~ 29080240 (+) False ptpn11a
XM_039780316.1 mRNA downstream 27083 29059445 ~ 29080239 (+) True ptpn11a
TU241633 other upstream 86071 28944507 ~ 28945444 (+) True G178506
XR_005636601.1 other upstream 443489 28580268 ~ 28588026 (+) False LOC120544907
XR_005636773.1 other upstream 1333583 27656536 ~ 27697932 (+) False lhfpl2a
TU241015 other upstream 2020120 27010197 ~ 27011395 (+) False nln
XR_005636777.1 other upstream 2416556 26589511 ~ 26614959 (+) False LOC120546038
TU241682 other downstream 52587 29084949 ~ 29092326 (+) True G178529
TU242100 other downstream 710261 29742623 ~ 29744075 (+) True G178845
TU242091 other downstream 761782 29794144 ~ 29795314 (+) False LOC120545429
TU242148 other downstream 988957 30021319 ~ 30022217 (+) True G178881
TU242149 other downstream 988957 30021319 ~ 30022217 (+) False G178881

Expression Profile