il1b


Basic Information

Item Value
gene id il1b
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 29951452 ~ 29965248 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779729.1
CGGGTCGGACGAGGCTATACGCTGGCAGCTTCGGTGAAATCAGAAATCATTCATATTTCATCTTCAAACTGCTTACATCGAGACGATGTGTGACTTCGACCTGTCTCAAGCTTTGGATGGCTCACCGGACTGTGATGAGTCAGGATTTGAGTCCTGCTGCTTTGACACAACGGACGTTCAGGATGAGTTCTTCCCACTCGACGAGGGACTGAACATGTTGGTTAGCCGCAATCGGAAGACCATGCAGTCTGTGGCTAACCTGCTGCTGGCGGTGAACAGGATGAAGAAGTCCCTGACGCGCTGCGACAGCGAGCTCAGCGACGAGGAGCTCTGCAGCGCCATCATGGAGAGCCTGGTGACCGTAACACTCGTCACGACGACGGAGGCTTCGTCCACGGGCATGAAGAGAATATTCCAGCGTCTCAACAGCGATCCTCTGTGCACGCTGTGTGACCATTCACAGAAATACATCGTCCAGGCGTCAGGGGGGTTAAAACTGCAGGCCGTGACTCTGCAGGGAGGAAACGGCGACAAGAAAGTGAACTTCAAGTTGTCGCGGTACATGACTCCGAACGTCTCGGCTGGTGAAGTAGGGGCCGTGGTCCTGTCCATCACCAACAAGCTGCACATGTCCTGCTGCATGAAGGACGGGAAGGCTGTGCTCAATCtggagGAACGCAGCAAggaggatttaaaaaagatCAGCGCCGACGGAGACATGGACCGGTTCCTCTTCTACAAGAGGACCACGGGGATGTCTCTGAACACGTTCGAGTCGGTCCGGTGCAGAGGCTGGTTCATCAGCACTTCCTACGAGGCCGAATACCAGCCGGTGGAGATGTGTGAACGGGACGCCAGCCGCCGCCTCACCCACTTCAAAGTTATCTGAAAAGTATATTGCTGTTAAACAGTTTGAATGTATCCAGAATTATGCAAAGATATAtagtgtatctgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K04519 IL1B; interleukin 1 beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779729.1 True 956 mRNA 0.53 6 29951452 29965248

Neighbor

gene id symbol gene type direction distance location
LOC120545406 cnnm3 coding upstream 26187 29895677 ~ 29925265 (+)
LOC120545067 cnnm4,LOC103473218,LOC107395816 coding upstream 68531 29846353 ~ 29882921 (+)
sec14l7 LOC103371288,LOC105915608,LOC104948033,LOC101066937,LOC106935672 coding upstream 109747 29831363 ~ 29841705 (+)
zfyve16 LOC101158542,LOC107104482,LOC106569324 coding upstream 160784 29740432 ~ 29790668 (+)
ckmt2a ckmt2 coding upstream 261144 29669572 ~ 29690308 (+)
gnsb gns,LOC104931705,LOC103374629 coding downstream 96352 30061600 ~ 30088020 (+)
nudcd3 nudcd3 coding downstream 143526 30108774 ~ 30115546 (+)
LOC120545415 camk2b,LOC102196557,LOC101473593 coding downstream 155109 30120357 ~ 30177697 (+)
ogdhb ogdh coding downstream 225022 30190270 ~ 30228617 (+)
ppiab ppia,LOC104934128,LOC104948019 coding downstream 351211 30316459 ~ 30322003 (+)
G178851 NA non-coding upstream 58268 29890345 ~ 29893184 (+)
G178858 NA non-coding upstream 147769 29802297 ~ 29803683 (+)
G178847 NA non-coding upstream 161341 29772320 ~ 29790111 (+)
G178848 NA non-coding upstream 178287 29772651 ~ 29773165 (+)
G178835 LOC104948034,LOC103371291,LOC107101750,LOC105915605 non-coding upstream 249613 29692438 ~ 29701839 (+)
G178882 NA non-coding downstream 57783 30023031 ~ 30023479 (+)
G178896 NA non-coding downstream 123031 30088279 ~ 30183476 (+)
G178902 NA non-coding downstream 141745 30106993 ~ 30108555 (+)
G178907 NA non-coding downstream 159390 30124638 ~ 30125211 (+)
G178910 NA non-coding downstream 191117 30156365 ~ 30156778 (+)
LOC120545429 LOC104948058 other upstream 155627 29793804 ~ 29795825 (+)
G178845 NA other upstream 201157 29742623 ~ 29750295 (+)
rasgrf2a NA other upstream 284221 29601531 ~ 29667231 (+)
G178529 NA other upstream 859126 29084949 ~ 29092326 (+)
ptpn11a ptpn11 other upstream 868441 29006621 ~ 29083011 (+)
G178881 NA other downstream 56071 30021319 ~ 30022217 (+)
zmiz2 zmiz2 other downstream 294118 30259366 ~ 30310894 (+)
LOC120545414 LOC106676976 other downstream 358864 30324112 ~ 30331614 (+)
G179407 NA other downstream 1422499 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 1599997 31565245 ~ 31653583 (+)

Expression


Co-expression Network