G178902


Basic Information

Item Value
gene id G178902
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30106993 ~ 30108555 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU242182
CGGACCTGGCTAAAGCACCAACAGCCTCGCGCTCCCTGTGCTGGTCAAGGACGCCGCCATGTTTTTTGAATATTAAACGTAAGAGGCGTAGAGCGCTAAGACTATTTTctcaaatgtgttatttttccGATGTAGTTTTAACATGTAATTAAAACTGAAACACGCAACTGATTATAACTCGTgctaatattagtcaaaattaGTTTGTCTCCGGTAAGCAATGCATGTACACTGGAACTGTTTATCCAACAGTCGGGCATCTGTTTCCGCCGAACGACTGTTGACATGTACCAACCGGATAAAGACAAAGTAAAA

Function

GO: NA

KEGG:

id description
ko03020 RNA polymerase

RNA

RNA id representative length rna type GC content exon number start site end site
TU242182 True 315 lncRNA 0.42 2 30106993 30108555

Neighbor

gene id symbol gene type direction distance location
gnsb gns,LOC104931705,LOC103374629 coding upstream 18973 30061600 ~ 30088020 (+)
il1b NA coding upstream 141745 29951452 ~ 29965248 (+)
LOC120545406 cnnm3 coding upstream 181728 29895677 ~ 29925265 (+)
LOC120545067 cnnm4,LOC103473218,LOC107395816 coding upstream 224072 29846353 ~ 29882921 (+)
sec14l7 LOC103371288,LOC105915608,LOC104948033,LOC101066937,LOC106935672 coding upstream 265288 29831363 ~ 29841705 (+)
nudcd3 nudcd3 coding downstream 219 30108774 ~ 30115546 (+)
LOC120545415 camk2b,LOC102196557,LOC101473593 coding downstream 11802 30120357 ~ 30177697 (+)
ogdhb ogdh coding downstream 81715 30190270 ~ 30228617 (+)
ppiab ppia,LOC104934128,LOC104948019 coding downstream 207904 30316459 ~ 30322003 (+)
LOC120545413 NA coding downstream 224752 30333307 ~ 30335753 (+)
G178854 NA non-coding upstream 271 29839836 ~ 30106722 (+)
G178882 NA non-coding upstream 83514 30023031 ~ 30023479 (+)
G178859 NA non-coding upstream 111477 29925734 ~ 29995516 (+)
LOC120545430 NA non-coding upstream 148604 29956270 ~ 29958389 (+)
G178851 NA non-coding upstream 213809 29890345 ~ 29893184 (+)
G178907 NA non-coding downstream 16083 30124638 ~ 30125211 (+)
G178910 NA non-coding downstream 47810 30156365 ~ 30156778 (+)
G178918 NA non-coding downstream 126663 30235218 ~ 30275572 (+)
G178933 NA non-coding downstream 256205 30364760 ~ 30368909 (+)
G178934 NA non-coding downstream 266259 30374814 ~ 30375165 (+)
G178881 NA other upstream 84776 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 311168 29793804 ~ 29795825 (+)
G178845 NA other upstream 356698 29742623 ~ 29750295 (+)
rasgrf2a NA other upstream 439762 29601531 ~ 29667231 (+)
G178529 NA other upstream 1014667 29084949 ~ 29092326 (+)
zmiz2 zmiz2 other downstream 150811 30259366 ~ 30310894 (+)
LOC120545414 LOC106676976 other downstream 215557 30324112 ~ 30331614 (+)
G179407 NA other downstream 1279192 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 1456690 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 1703174 31811729 ~ 31832260 (+)

Expression


Co-expression Network