LOC120545413


Basic Information

Item Value
gene id LOC120545413
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30333307 ~ 30335753 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779708.1
TTGCAGATTGGTGTAACCAACACGCTGCTGAAGTACAACAGAGTATCACTGCTGTTTTTAGATCAGAGCTCAGACTAGTTCCACTTCTCAGGAAGTGAGACTCAGACAGTCGTTGTCACTGAGCGGTAAAATGGCgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaacAGTTTCTGGGATGAAGGGGATGAGAAGGAAACCCACAGCTGTCCTCAGTGCAGACAGAGcttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctggAGATGTGGTCTGTGATTTCTGCACCGGGAGAAAACTGAAAGCACACAAGTCCTGTCTCGTCTGTCTGGCTTCTTACTGTGAGAAACACCTTCAGCCTCATTATGATGTCGCTCCattaaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagatgttctgccgtaatgatcagcagcttatctgttatctctgctctgtggaggaacataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctcgaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatctctctgctgataaaacagtggaggacagcgagaagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtggagcagcaggtcagatccaGGCAGAAAAGTGAAGAGAGTCGAGTCAgagagcttcaggagaagctggagcaggagatcactgagctgaagaggagagacgctgagctgaagaagctctcgcacacagaggatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagaggacaaacatctcactgacagggactgaagtggacgttttactgccacaaccacaaccagagcccaagaccagagctggattcttaaaatattcacgtgacatcacactggatccaaacacagcacacacacggctgttattatctgaggggaacaggaaagTAACATTCATGAATCAACAACAGtcttattctagtcacccagacagattcactaactggtctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagaggagaggaggaggagtttatgtagcagtcgcatacaagaaCATCATCAGAGCAGGGGGGTCGGCTGAATGTGGATTTGGATACAATGACAAATCTTGGGCGTTATATTGCAACAACAGTTATATATTTTGGTACAACAATGTCCACACTCATGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtatcctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTAATGGTTCATTATTCTGGAgactctgctgagttgtgtaaactgaaatagacagaagtcatttaagggttaaattctgtgttttaactctTCAACTTATTCAGGGTTCAACAACAAGGGTTTCCTGATGGCCCGGGGCAAATAAAACACCACATGGGGCAAATAAATATAACAACCCACCTGCCTGACAcgagatgtttaaaaaaaaaaaaaagcttttacaCTTTTGACGGTTTCGAACATTTTCCAAGTAATTTTTTACGTTTTAggacttttttcttttacatttgacTTGTTTTCCAATGACTTCGactttataaaaaaatgttttttcacgtttttttcacagtttttccgaagtttgacatgtttttcccaatgtttttctttactttttcaatgcttttaaaaaaaacgttttttcaAACATTCCTCTttgaggtttaaaaaaagaaaggggccagtaaaaactgTCTCCGGACAAGTAGAAACCTTCACGTTGAACCGTGTTATTTTAGGCTCCATGTTTGTTGTTTAGAGCTGAttgtttatgtctttttttttatgtttttgttgcttttatcaatgttttttttgtcagtttttcaacatttctttttttgagaTGACCATcacctgttgtttttttcagccAACATTTCCTCTCTGAGACAATAAATATTAAGCTAAAACTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779708.1 True 2447 mRNA 0.44 1 30333307 30335753

Neighbor

gene id symbol gene type direction distance location
ppiab ppia,LOC104934128,LOC104948019 coding upstream 11304 30316459 ~ 30322003 (+)
ogdhb ogdh coding upstream 104690 30190270 ~ 30228617 (+)
LOC120545415 camk2b,LOC102196557,LOC101473593 coding upstream 155610 30120357 ~ 30177697 (+)
nudcd3 nudcd3 coding upstream 217761 30108774 ~ 30115546 (+)
gnsb gns,LOC104931705,LOC103374629 coding upstream 245287 30061600 ~ 30088020 (+)
LOC120545426 LOC103129635,LOC106953379,LOC106904245,LOC107386157,LOC105916632,LOC103470758,LOC100699155,LOC102206240,LOC102305468 coding downstream 2957 30338710 ~ 30344803 (+)
ddx56 ddx56 coding downstream 46228 30381981 ~ 30399109 (+)
ash2l ash2l coding downstream 114684 30450437 ~ 30466212 (+)
scarb1 NA coding downstream 176208 30511961 ~ 30542533 (+)
slc4a5b LOC102799615,LOC102199953,LOC101477060,LOC107395321,LOC102294077,LOC108245384 coding downstream 251254 30587007 ~ 30683074 (+)
G178918 NA non-coding upstream 57735 30235218 ~ 30275572 (+)
G178896 NA non-coding upstream 149831 30088279 ~ 30183476 (+)
G178933 NA non-coding downstream 29007 30364760 ~ 30368909 (+)
G178934 NA non-coding downstream 39061 30374814 ~ 30375165 (+)
G178950 NA non-coding downstream 88200 30423953 ~ 30430650 (+)
LOC120544906 NA non-coding downstream 240556 30576309 ~ 30577206 (+)
G178983 NA non-coding downstream 348446 30684199 ~ 30684478 (+)
LOC120545414 LOC106676976 other upstream 1693 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 22413 30259366 ~ 30310894 (+)
G178881 NA other upstream 311090 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 537482 29793804 ~ 29795825 (+)
G178845 NA other upstream 583012 29742623 ~ 29750295 (+)
G179407 NA other downstream 1051994 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 1229492 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 1475976 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 1724172 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 1743424 32079177 ~ 32099542 (+)

Expression


Co-expression Network