ppiab (ppia,LOC104934128,LOC104948019)


Basic Information

Item Value
gene id ppiab
gene name ppia,LOC104934128,LOC104948019
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30316459 ~ 30322003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779733.1
GATCCAGTGTCTCTGACGCGTTGTCAGGAATTCATACAAGTGCGTATTTCCATCATCATACCCGTATCACAGGCAGGTCTATCAACATGGGGAACCCCAAAGTTTTCTTTGACATCACCATTGATGGAGCCAACGCTGGCAGGATTATAATGGAGCTCCGGGCTGATGTGGTCCCAAAGACTGCAGAAAATTTCCGTGCTTTGTGCACCGGGGAGAAGGGTTTTGGCTACAAGGGCTCCACGTTCCACCGTCTCATCCCTAAATTCATGTGCCAGGGAGGGGACTTCACCAATCACAATGGAACTGGAGGCAAATCCATCTACGGGGAGAAGTTTGCAGATGAGAACTTCCAGCTGAAGCACACAGGCCCGGGCATCCTGTCCATGGCTAATGCCGGGCCCAACACCAACGGATCCCAGTTCTTCCTCTGCACAGAAAAAACTGACTGGCTGAACGGCAAGCACGTGGTGTTTGGCTGCGTTGTGGAGGGCATGGATGTTGTCAAGGCGATGGAGAAGCAAGGCACGAAGAGCGGCACTCCTAAAGCCAAGGTTGTCATCGCCGACTGTGGGGAATTAAACTAGAGCGACGAGGCTCCTTCAGCTGGGATGTATCCTCTACCGTCCACAGCCCAGTTAATCTCTGAGATAGTCGTGTATATCTGCTCCATCCGTAGAGAACCCCCCAGTTAACCCTGCTTCCTCCTCCGAAAATGTCCGTCTCCTGCGTTGATATTCGTTGTGTAATATTTTGTACCTTCTAATTTGTTCCTTGAGGACCACGTTTGTTAACAAAATCTGAATGAAATGATCTCGATGTTGTAAATAAAACAACTTGAAAGCTTA

Function

symbol description
ppia Enables cyclosporin A binding activity; heparan sulfate binding activity; and peptidyl-prolyl cis-trans isomerase activity. Involved in several processes, including cell adhesion molecule production; regulation of intracellular signal transduction; and regulation of protein modification process. Located in cytoplasm; extracellular region; and nucleus. Part of protein-containing complex.

NR:

description
2-peptidylprolyl isomerase A

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0001666 response to hypoxia biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K01802 E5.2.1.8; peptidylprolyl isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779733.1 True 845 mRNA 0.49 5 30316459 30322003

Neighbor

gene id symbol gene type direction distance location
ogdhb ogdh coding upstream 87842 30190270 ~ 30228617 (+)
LOC120545415 camk2b,LOC102196557,LOC101473593 coding upstream 138762 30120357 ~ 30177697 (+)
nudcd3 nudcd3 coding upstream 200913 30108774 ~ 30115546 (+)
gnsb gns,LOC104931705,LOC103374629 coding upstream 228439 30061600 ~ 30088020 (+)
il1b NA coding upstream 351211 29951452 ~ 29965248 (+)
LOC120545413 NA coding downstream 11304 30333307 ~ 30335753 (+)
LOC120545426 LOC103129635,LOC106953379,LOC106904245,LOC107386157,LOC105916632,LOC103470758,LOC100699155,LOC102206240,LOC102305468 coding downstream 16707 30338710 ~ 30344803 (+)
ddx56 ddx56 coding downstream 59978 30381981 ~ 30399109 (+)
ash2l ash2l coding downstream 128434 30450437 ~ 30466212 (+)
scarb1 NA coding downstream 189958 30511961 ~ 30542533 (+)
G178918 NA non-coding upstream 40887 30235218 ~ 30275572 (+)
G178896 NA non-coding upstream 132983 30088279 ~ 30183476 (+)
G178910 NA non-coding upstream 159681 30156365 ~ 30156778 (+)
G178907 NA non-coding upstream 191248 30124638 ~ 30125211 (+)
G178902 NA non-coding upstream 207904 30106993 ~ 30108555 (+)
G178933 NA non-coding downstream 42757 30364760 ~ 30368909 (+)
G178934 NA non-coding downstream 52811 30374814 ~ 30375165 (+)
G178950 NA non-coding downstream 101950 30423953 ~ 30430650 (+)
LOC120544906 NA non-coding downstream 254306 30576309 ~ 30577206 (+)
G178983 NA non-coding downstream 362196 30684199 ~ 30684478 (+)
zmiz2 zmiz2 other upstream 5565 30259366 ~ 30310894 (+)
G178881 NA other upstream 294242 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 520634 29793804 ~ 29795825 (+)
G178845 NA other upstream 566164 29742623 ~ 29750295 (+)
rasgrf2a NA other upstream 649228 29601531 ~ 29667231 (+)
LOC120545414 LOC106676976 other downstream 2109 30324112 ~ 30331614 (+)
G179407 NA other downstream 1065744 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 1243242 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 1489726 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 1737922 32059925 ~ 32078010 (+)

Expression


Co-expression Network