LOC120545426 (LOC103129635,LOC106953379,LOC106904245,LOC107386157,LOC105916632,LOC103470758,LOC100699155,LOC102206240,LOC102305468)


Basic Information

Item Value
gene id LOC120545426
gene name LOC103129635,LOC106953379,LOC106904245,LOC107386157,LOC105916632,LOC103470758,LOC100699155,LOC102206240,LOC102305468
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 30338710 ~ 30344803 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779732.1
AGGCTCACTTAAATACGGAAGTGTATCCTGTCTGGCACGCTGTCCATACAAGAGTATCTTTCCCACTCTAAAGCACAAGCTCGTTGAGAAACATGGCGAAACCCAGAGTTTTCTTCGACATCACTATTAATGGAGCTAAGACTGGCAGGATTGTAATGGAGctcCGGGCTGATGTGGTCCCAAAGACTGCAGAAAATTTCCGTGCTTTGTGCACTGGGGAGAAGGGTTTTGGCTACAAGGGCTCCACGTTCCACCGTATCATCCCTAAATTCATGTGCCAGGGCGGGGACTTCACTAGGCACGATGGAACTGGAGGCAAATCCATCTACGGGGAGAAGTTTGCTGATGAGAACTTCCAGCTGAAGCACACAGGCCCGGGCATCCTGTCCATGGCTAATGCCGGGCCCAACACCAACGGATCCCAGTTCTTCCTCTGCACAGAAAAAACTAGCTGGCTGGACGGGAAGCACGTGGTGTTCGGCTGTGTTGTGGAGGGCATGGATGTTGTCAAGAAAATGGAGAGCTACGGCACAGACGGCGGCAAACCAAAAGACAAAGCCAAGGTTGTCATCGCCGACTGTGGCGAGCTAAAATAGTTTGGGCTTGTTCTCCCGTAAGATTTATTTGTTCGTGTACCATTTTGTACCTTCTAATCGGTTCTCTGAGGACATTTGTTAACACAATCTGAATAAAATGTTGCTGATGGTGTAAATAAAGCAACTTGAAAAGCTAA

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase-like

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K01802 E5.2.1.8; peptidylprolyl isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779732.1 True 733 mRNA 0.49 5 30338710 30344803

Neighbor

gene id symbol gene type direction distance location
LOC120545413 NA coding upstream 2957 30333307 ~ 30335753 (+)
ppiab ppia,LOC104934128,LOC104948019 coding upstream 16707 30316459 ~ 30322003 (+)
ogdhb ogdh coding upstream 110093 30190270 ~ 30228617 (+)
LOC120545415 camk2b,LOC102196557,LOC101473593 coding upstream 161013 30120357 ~ 30177697 (+)
nudcd3 nudcd3 coding upstream 223164 30108774 ~ 30115546 (+)
ddx56 ddx56 coding downstream 37178 30381981 ~ 30399109 (+)
ash2l ash2l coding downstream 105634 30450437 ~ 30466212 (+)
scarb1 NA coding downstream 167158 30511961 ~ 30542533 (+)
slc4a5b LOC102799615,LOC102199953,LOC101477060,LOC107395321,LOC102294077,LOC108245384 coding downstream 242204 30587007 ~ 30683074 (+)
crybb1 crybb1,LOC101477459 coding downstream 771049 31115852 ~ 31123205 (+)
G178918 NA non-coding upstream 63138 30235218 ~ 30275572 (+)
G178896 NA non-coding upstream 155234 30088279 ~ 30183476 (+)
G178933 NA non-coding downstream 19957 30364760 ~ 30368909 (+)
G178934 NA non-coding downstream 30011 30374814 ~ 30375165 (+)
G178950 NA non-coding downstream 79150 30423953 ~ 30430650 (+)
LOC120544906 NA non-coding downstream 231506 30576309 ~ 30577206 (+)
G178983 NA non-coding downstream 339396 30684199 ~ 30684478 (+)
LOC120545414 LOC106676976 other upstream 7096 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 27816 30259366 ~ 30310894 (+)
G178881 NA other upstream 316493 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 542885 29793804 ~ 29795825 (+)
G178845 NA other upstream 588415 29742623 ~ 29750295 (+)
G179407 NA other downstream 1042944 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 1220442 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 1466926 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 1715122 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 1734374 32079177 ~ 32099542 (+)

Expression


Co-expression Network