XLOC_000049 (CR352215.1)


Basic Information

Item Value
gene id XLOC_000049
gene name CR352215.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 2275605 ~ 2275742 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000099
GCCTTGTGGTTCCTTAAGACAGCTCATCGGTGCTGATGCTTGAGGTTGTGTTTGACGGGCACACATTGATCTCTGCAATTTAATGCGTGGTGGCTGACATTTCCATGCAGCTTCCACAGCCCGGTTGCAGAAACATGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082290

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000099 True 138 snoRNA 0.50 1 2275605 2275742

Neighbor

gene id symbol gene type direction distance location
XLOC_000047 rap2ab coding upstream 35486 2222363 ~ 2240119 (+)
XLOC_000046 mbnl2 coding upstream 57744 2101541 ~ 2217861 (+)
XLOC_000045 slc5a3a coding upstream 248505 2025085 ~ 2027100 (+)
XLOC_000044 NA coding upstream 251960 2023409 ~ 2023645 (+)
XLOC_000043 NA coding upstream 269973 2001716 ~ 2005632 (+)
XLOC_000050 farp1 coding downstream 26216 2301958 ~ 2444210 (+)
XLOC_000051 CR352215.2 coding downstream 127361 2403103 ~ 2403224 (+)
XLOC_000052 gpc6a coding downstream 437214 2712956 ~ 3036019 (+)
XLOC_000053 NA coding downstream 1442924 3718666 ~ 3720603 (+)
XLOC_000054 CABZ01063288.1 coding downstream 1484182 3759924 ~ 3760034 (+)
XLOC_000034 NA non-coding upstream 656291 1617203 ~ 1619314 (+)
XLOC_000032 NA non-coding upstream 697354 1571847 ~ 1578251 (+)
XLOC_000031 NA non-coding upstream 914774 1358731 ~ 1360831 (+)
XLOC_000056 FO744838.1 non-coding downstream 2322318 4598060 ~ 4680477 (+)
XLOC_000057 NA non-coding downstream 2625718 4901460 ~ 5030155 (+)

Expression


Co-expression Network