G179517


Basic Information

Item Value
gene id G179517
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31486693 ~ 31490363 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243097
agagagagatagagaggaagTACGGTAAGAAGAAGATGGAGATTTTTGGCTCTGGTGAgataaagaaagaagagaataaaagaaaagaaaagggagcTGAGGAGGTTTCAGTCGAGTGATATGAGAAGGTTATTTGCAACAGGTTGCATAGAAGAGAAGATTCACTTGATGTGAAAACACTTCTCAGAGTTTAGGGAATAATCTGCAGAGCTGTGTTGGCCAACCTGGGATTTTTAAGCAAAACTGTGATCCAGAGACACAGAGCTATGGAAGCAAAGAAAGCAAGCCGCCAGGATTTCTAGCTTAGGTCGGCTACACGCTTGGCTGCGTGGCGCGAGCGTGTCCGTTCATATTTGGGCTACCATGGTAACAGggttagagcgtgcacgctgcctgcgcgacacgcaagcgtgttggaagcgtttccaacCAAAATtataataggaaaagatgtttacatgtcatttagacacTAATACATCTTAATatatgacatgttgatgtttgaaagtctctagatTTTGATATaaattcagatacagtacaggccaaaagtttggacacaccttctcattcaatgtgtttcctttttattttcatgactatttacattgtagattctcactgaaggcatcagaactatgaatgaacacatatggaattatgtacttaacaaaaaagtgtgaaataactgaaaacatgtcttatattttagattcctcaaagtagccaccctttgctttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttaccttcacaggtgtgctttgtcagggttaattagtggaagtttttccctaattaataaaaaaggcaaagtgtggctactttgaggaatctaaaatataagacatgttttcagttatttcacacttttatttttgggcgctttttctgtcagttttttggcgcttttatttgatgattttggcgctttttaaaaacatttttgtccctcttttcaacattttattttttcctttttcttttaaagttagaatatttcaataaagttattttCAAAGTATTCAGTAATGGTTTCTTTTAACCCTATTGTGTTGTCTCCCAGTCGACCGCGCAATGTTTTTGCTATTCAGGGTctaaaattaaaactatttggtcgtctttttcaacatttttgtcgcaTTTCTCGaagttttttcaacattttcgtgaaattttttttgtcacctttttgtcgatttctttcaacatttttttaattttttttttcaaatgctataaaattgaattaaaaaacccaaattcaatgaaagtagtgaactgatcattcattttacttgtgaagcGCATTGTagagaaccatccacgttatttatatatattttttgacaatttggttgaaagaaaccccaaATTTCAAACAACAGGAGGGCTAAACActtttttgaatttaaaaagaaataatctTGGCCTTTATTTGCTTCCATACGACACACAACCTGCAGTATTGTTGGTTTTTACAactcaaacagacagacagacagaaactcgTCCAAACTTGAGTTTTTACTGAACTTCACTCATGGCCTTGTTGTTATGcacagagagtgagagggagttAGCCATTAGCTTAGCATTCAGAGTTGGGATCGCACTCCTATAAAAAGCCATATCCAACAGGACAGAGATGCTTTGCTGCACAAAGCTTATATAGCGTTATGTTTTTGAACTGTTTATATCAAATTGATATTGTTGGATGTCTGCGGCTCTATTTAATAACATAAAAGtaatataaaaattaaaaagcacAGACATTTTCTATTTAACATTCAGGGAGACTTTAAGTCAGCTGGAAGTTTAGAATTCACCTTTAAAGTTTAGCGGGTGTCAGAGCAACGAATCACAAAAGGACAATTATTAAAATATGCCCTATTTACAGAGGTGGAAGATTATTTACAGTCCAACAAATATATCCTACTTAAAGTACAGATGTGTATCAGctaaatgagagggggaaacgccagacaccagagcagggggaatgagaggagaaaACGCCAGAGCAAGGGGAATCAATCagatgagagggggaaacgccagagcagggggaatgagaggaggaaacaccagagcagggggaatgagatgagagggggaaacaccagagcagggggaatcagatgagagggggaaacgccagagcgcTTAAAAGGAATTTAAGTTATCATATAAATGTGGTGAAGTAGTGCCCGGGTtggtcagtgggtagagcaggcgcacatatccAACCTGTGgtaatttcctgcatgtcttctctctctctctctctctctctctctctctctctctctctctccccctttctcacctagctgtcctgtcaaattaaaaggcagaaaagcccccaaaaaaatcttcttTAAATGTGCTGAAGTAAAAGCTACCATTgatccctctgagatgtagtggagtagaagtaggaaGCGGCTACAGCAGTAAATGTACTTCCAACTCTGTATACATTTGTGCTGTAACTCTACAAAAACATTCTggacatttttaataatttgtGCCTTGTACCTAAAAACTGACACCCGCCACAATAAGAGCCCAACAGTTGCTGACTGATATCCACGGTGTGTTTTTAAGGAGACGGAGAGGTGGCTGAGGGCTGTtcacatttgaatattttggtttaaaaactgtATATTTGGAGCTTAAACCCCTCAGctacagtgtgtttgtgtttgtgctacATCTGCGACTAAATTCACTAAttttactaaaataaaaaaaagaagctgctctagtttaaaggtcccatgacatggtgctctttggatgcttttatatagacctcagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagt

Function

GO: NA

KEGG:

id description
ko04020 Calcium signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU243097 True 3099 lncRNA 0.38 2 31486693 31490363

Neighbor

gene id symbol gene type direction distance location
LOC120545152 NA coding downstream 108523 31357806 ~ 31378170 (-)
LOC120545148 LOC106675582 coding downstream 113935 31370843 ~ 31372758 (-)
LOC120545158 LOC106675582 coding downstream 119267 31366957 ~ 31367426 (-)
LOC120545151 NA coding downstream 126873 31358082 ~ 31359820 (-)
LOC120545147 NA coding downstream 140307 31344620 ~ 31346386 (-)
LOC120545153 LOC103375381 coding upstream 184 31490547 ~ 31509528 (-)
cetn3 cetn3 coding upstream 80315 31570678 ~ 31577776 (-)
LOC120545145 vcan coding upstream 172109 31662472 ~ 31713774 (-)
xrcc4 NA coding upstream 227552 31717915 ~ 31771254 (-)
zcchc9 zcchc9,LOC102776123 coding upstream 296067 31786430 ~ 31794121 (-)
G179500 NA non-coding downstream 23966 31436564 ~ 31462727 (-)
G179516 NA non-coding downstream 26821 31458612 ~ 31459872 (-)
G179503 NA non-coding downstream 62359 31420681 ~ 31424334 (-)
G179492 NA non-coding downstream 79026 31344047 ~ 31407667 (-)
G179491 NA non-coding downstream 110689 31343079 ~ 31376004 (-)
LOC120545159 NA non-coding upstream 36989 31527352 ~ 31546421 (-)
G179530 NA non-coding upstream 57717 31548080 ~ 31548615 (-)
G179537 NA non-coding upstream 70233 31560596 ~ 31580277 (-)
G179538 NA non-coding upstream 105150 31595513 ~ 31671806 (-)
G179543 NA non-coding upstream 166608 31656971 ~ 31660595 (-)
grk3 grk3,LOC107396329,LOC107101402 other downstream 399295 30970059 ~ 31087398 (-)
LOC120544905 LOC103372244,LOC108245379,LOC101072387 other downstream 918663 30532888 ~ 30568030 (-)
G179135 NA other downstream 1150957 30328395 ~ 30335736 (-)
polm polm other downstream 1433469 30039560 ~ 30053224 (-)
G179005 ckmt2,LOC108245395,LOC105915604,LOC106522195 other downstream 1799804 29681493 ~ 29686889 (-)
G179540 NA other upstream 124404 31614767 ~ 31615418 (-)
LOC120545078 LOC108242566,LOC106513792 other upstream 518275 32008638 ~ 32039414 (-)
G179676 NA other upstream 593005 32083368 ~ 32085329 (-)
G179746 NA other upstream 781940 32272303 ~ 32279386 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other upstream 1162398 32652761 ~ 32671947 (-)

Expression


Co-expression Network