G185035


Basic Information

Item Value
gene id G185035
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17426204 ~ 17432964 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250610
TGTTAATTgaaaaagatttattttattgttcacagTGCTCAGAGGTTGGTTGTCAGAACAGAAATGTACATTCAAAAATTCAGATGGCAAACATCTTATTAACTCACCAGTACATGTATTCATTTTGGACACCATAGGCTTCATTCGAAGGGGTTCATTTAATAATTCTATCAAACTTATTAAGCATAAGATTACTTTACCTTAAGACATTAAGGTAGCTAGCATGTACTTTAGCTATCTGCTACTACCAGTAGCTATCGTTGCCAGAGAAAGAATAGAAATGTTCATGTGATATGATTGAAGGCCATAAAAACAGCTATtagaaattaacttttttatttatttatttattttaaagattttttttggggcattttcagtcttttttttgataggacagcagaagacatgaaaggggagagagagtgggaatgacatgcagcaaagggccgcaggtcggagtctaacccagcccgctgcgtcgaggagcaaacctccaCATAAGGGAGCCCGCTCCatcaactgagctatccgggcgcatattttgaaactgtttgGTCAAGAATGTACTTTCAGCTTTTTAAAGCAAACATGGACAAGAAGTGTTTAAAGTATTCAGAAAAAATGGGAGTATAAACATAATCTCCAGATCCACTAAAAACTTAAACACTAAACTAACCTTGTAGTGAGATTGTTTTCTCCACAGCAGCCATAATCATTTTCTCACACGGTGCATTAGTCTCTGTGCTGATCATACTCGAAAACAAATGATCAaaatacagagaaaaaaaaaacagcatttaaacTTCTCTCAGTAATAGCAGCACTAGATTGGACTCAAACCCACCAAAAGATAAAGGATGTGTTCTACTTACTTCTGAGTGTTGGGCACTGGGATAATTATCTAATCTATATGTGAAGATGGAGATTATACTATTGGACACGCACAGTTAAATTTGGGGTGAAATTGCACCACATGATTAGTTAATTGAGCACAGTGCTTACTTTTGAACATGTATGGCCCTTTAAGGgggtaaaaaaacagaaaacataacttttttttgtccGACCTCATGATAGAagctactgtactgtatatataataccAGGTAGGCCTAAACAAATCTCTTTAAACTGTCACAGTAAATTAACAGATTTCATGAGACAAACATCTTTTTAATACGATAATAATTATAGTGAATCAGATATAATAATCACTCTGGCATGAAAACCTGTattaaacacatacagtacacatttgTACTTGTTAGTGAAACCAGTATGGCTCACTGACCCTGTATCAGTTCTGATTCTGAGAGgtattgaaatacaaggcaacCGGTTTTAGGTACGATACAGTGGTGTTCTGAGTACATGGTTTATTCTTAGTAACCGCTGAGAAATGATTCCCCATAACAGGAGAGAAGTCAAACACAGTGACAACAGTTTGTACTTTAGACAATATCACAGCTTATATATAGTGGTAGTTTCAGCAAAGCCAATAGAGTGCTATAGTTAAGACATTAATTTACTTATTAACATAGATAGATATGAATATGGCCACTTTCTTACAACTCGGCCAGTGACTTAACTTTGTAAGAAATTGTTATATAATTgtttcgacacttttgtcaaTAAACAGTATCTGTAATAGTTTTATAGTATTACATTGTATGAAGAATACACTGTGTGTTGGCTGGGTTGGTGGAATCATAAAGCTCAGGTTATGGCTCCGGCTTCTGTTAGCACCGTGTACAGTACACAGCCTCGACCATGCCAGATGGGAATCTTAAACGTGACAACCTTAACTATACATATTTAGAGCAGAGTGGTTAAAAAAAGAGCCATTTTATAGcgatatattttacatttggaCCAAGTAGTATTTACAAATTCTTTATATGCTTTGTTTTAGGTTATATCAGCTCCATATTGATCAGTTTAGTAACATTAAGACAATGAattgtacatatttttttttatattaaagatGCTATATAGTTTTCTTAATTGTCTTGATACTCACTGCAATGTATTATGAATTAGAAGTTAGAATTAGAGGTTTTTGCAATTACTAATTGGCTTTACGTGACATACGATGCAGTGCACACAGTACAGCAAGTGTAAAAAGGAAGTACTGTAATAGCTGTAGAGAGGTAACAGCAGTGAGTCAATGTCAGTCAGAACAGTACATTGGCACCTTGGCAATGCTCACTGGGTCTAAGACCCAATCTAAACCTGATACTGGGTGaaagataaaacaggaaacaagctGCCACActactgtaagtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgag

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU250610 True 2361 lncRNA 0.36 2 17426204 17432964

Neighbor

gene id symbol gene type direction distance location
armc1l LOC103368599,LOC104950028,LOC108242485 coding downstream 47576 17375197 ~ 17378628 (-)
iyd iyd coding downstream 115757 17307112 ~ 17310447 (-)
sec63 sec63 coding downstream 119978 17291166 ~ 17306226 (-)
scml4 LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495 coding downstream 138563 17269861 ~ 17287641 (-)
lratd1 fam84a coding downstream 245493 17178364 ~ 17180711 (-)
myb myb coding upstream 32954 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 223690 17656654 ~ 17657876 (-)
LOC120547287 NA coding upstream 264474 17697438 ~ 17701407 (-)
rps12 rps12 coding upstream 327906 17760870 ~ 17763808 (-)
LOC120547356 NA coding upstream 328992 17761956 ~ 17762038 (-)
G185054 NA non-coding downstream 26753 17396471 ~ 17399451 (-)
G185039 map7,LOC107374525 non-coding downstream 63301 17362009 ~ 17362903 (-)
G185031 ppp1r14c non-coding downstream 93231 17312485 ~ 17332973 (-)
G184989 NA non-coding downstream 255942 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 490023 16933693 ~ 16936181 (-)
LOC120546280 NA non-coding upstream 85807 17518771 ~ 17521010 (-)
G185094 NA non-coding upstream 92554 17525518 ~ 17527365 (-)
G185123 sgk1 non-coding upstream 132705 17565669 ~ 17578288 (-)
G185124 NA non-coding upstream 153287 17586251 ~ 17586492 (-)
G185125 sgk1 non-coding upstream 160402 17593366 ~ 17595997 (-)
LOC120547341 NA other downstream 156570 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 590221 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 908330 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1237874 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1357895 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 190160 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 331841 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 478306 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1056851 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1207457 18640421 ~ 18647401 (-)

Expression


Co-expression Network