zgc:153284


Basic Information

Item Value
gene id zgc:153284
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17764805 ~ 17766910 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250853
AAACAGCTCCACATACCTGCATTTAGTATACTGGAACCTTCTGTCTCTGCACTTCTCTCAATCTGTCTTCAGATCAAAGTGTTATTGCTAAAATAGCAGCTATGCCGGTCATAGTGTTTTGTTCCAACGTGAGCGGTTCCCGAGAGATAaagacaaaacagaacaaaatctTTCATGTCCTGGATGGCAAGAAGATTGCCTACGAAACTGTCGACATTTCTGAGGATTCTAAAAAAAAGGATCTAATGAGGAACCTGGCAAAGAACTCAACTGCACTGCCTCCTCAAATATGCAATGGGAACAACTACTGTGGGGACTATGATGCGTTTGACAATGCAGTCGAGGAAGGAACTTTAGAGAAGTTTCTCAAACTCTAAAAGCAATGGAGACCTGCTATGGGACAACAATGAATCTATAAAATACTATATTAACATTTCTGTGTCCTTTTATTTGATTTGGTTATCAAGGAACTGTACATTTTCCATTTGTACTTGCCTTCTTTTCAGGGAAATCCTAATGGGAATTTTTGGAGTTGCACA
>TU250856
AAACAGCTCCACATACCTGCATTTAGTATACTGGAACCTTCTGTCTCTGCACTTCTCTCAATCTGTCTTCAGATCAAAGTGTTATTGCTAAAATAGCAGCTATGCCGGTCATAGTGTTTTGTTCCAACGTGAGCGGTTCCCGAGAGATAaagacaaaacagaacaaaatctTTCATGTCCTGGATGGCAAGAAGATTGCCTACGAAACTGTCGACATTTCTGAGGATTCTAAAAAAAAGGATCTAATGAGGAACCTGGCAAAGAACTCAACTGCACTGCCTCCTCAAATATGCAATGGGAACAACTACTGTGGGGACTATGATGCGTTTGACAATGCAGTCGAGGAAGGAACTTTAGAGAAGTTTCTCAAACTCTAAAAGCAATGGAGACCTGCTATGGGACAACAATGAATCTATAAAATACTATATTAACATTTCTGTGTCCTTTTATTTGATTTGGTTATCAAGGAACTGTACATTTTCCATTTGTACTTGCCTTCTTTTCAGGGAAATCCTAATGGGAATTTTTGGAGTTGCACATCTGAACAGTTTgtatgattaaaaataaaaaattcttaATATCGTTTGAACTCTACCTGTTGCACTCATTAACATGAGTTTTGTTATGTCTTATTTTTGTGAAAGGCTGATACAATG
>XM_039782776.1
TTTTCCTACTGTAACAAAATGTCTTGTGGTGGAGGTAGAAGTTTAAAGTAGCATAAactggaaatactcaagtacctCTAATGTGCTTATGTTCAGACCGtacagttactttccaccactggtgtgtgtgtgtgtgtgtgtgtgtttgttttgtgctttCACAATCGACATAGGCAGGCTACAACTGGAATGGCAGTCCCACAAGTGGGTGTGTCTATGGAGGCAGGTAAGCCGTGTCCAAACCTGCTCACCTTGTCTGCTGTTGCATCAAAACAGCTCCACATACCTGCATTTAGTATACTGGAACCTTCTGTCTCTGCACTTCTCTCAATCTGTCTTCAGATCAAAGTGTTATTGCTAAAATAGCAGCTATGCCGGTCATAGTGTTTTGTTCCAACGTGAGCGGTTCCCGAGAGATAaagacaaaacagaacaaaatctTTCATGTCCTGGATGGCAAGAAGATTGCCTACGAAACTGTCGACATTTCTGAGGATTCTAAAAAAAAGGATCTAATGAGGAACCTGGCAAAGAACTCAACTGCACTGCCTCCTCAAATATGCAATGGGAACAACTACTGTGGGGACTATGATGCGTTTGACAATGCAGTCGAGGAAGGAACTTTAGAGAAGTTTCTCAAACTCTAAAAGCAATGGAGACCTGCTATGGGACAACAATGAATCTATAAAATACTATATTAACATTTCTGTGTCCTTTTATTTGATTTGGTTATCAAGGAACTGTACATTTTCCATTTGTACTTGCCTTCTTTTCAGGGAAATCCTAATGGGAATTTTTGGAGTTGCACATCTGAACAGTTTgtatgattaaaaataaaaaattcttaATATCGTTTGAACTCTA

Function

NR:

description
SH3 domain-binding glutamic acid-rich-like protein 3

GO: NA

KEGG:

id description
K23740 SH3BGR; SH3 domain-binding glutamic acid-rich protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU250853 False 539 TUCP 0.39 3 17764922 17766640
TU250856 False 656 TUCP 0.37 3 17764805 17766640
XM_039782776.1 True 864 mRNA 0.40 3 17764867 17766910

Neighbor

gene id symbol gene type direction distance location
rps12 rps12 coding downstream 997 17760870 ~ 17763808 (-)
LOC120547353 NA coding downstream 1997 17762733 ~ 17762808 (-)
LOC120547359 NA coding downstream 2323 17762398 ~ 17762482 (-)
LOC120547356 NA coding downstream 2767 17761956 ~ 17762038 (-)
LOC120547287 NA coding downstream 63398 17697438 ~ 17701407 (-)
LOC120547258 NA coding upstream 249 17767159 ~ 17779910 (-)
sh3bgrl2 sh3bgrl2 coding upstream 16829 17783739 ~ 17790479 (-)
ccm2 ccm2 coding upstream 47565 17814475 ~ 17824517 (-)
xkr6b xkr6,LOC104922444,LOC102798941,LOC102196726,LOC102289544 coding upstream 58729 17825639 ~ 17879853 (-)
si:dkey-71h2.2 LOC102796288,LOC101475494,LOC104959816,LOC106959609,LOC103138648 coding upstream 295810 18062720 ~ 18101094 (-)
G185200 NA non-coding downstream 73363 17687876 ~ 17691442 (-)
G185125 sgk1 non-coding downstream 168808 17593366 ~ 17595997 (-)
G185124 NA non-coding downstream 178313 17586251 ~ 17586492 (-)
G185123 sgk1 non-coding downstream 186517 17565669 ~ 17578288 (-)
G185094 NA non-coding downstream 237440 17525518 ~ 17527365 (-)
G185236 NA non-coding upstream 149231 17916141 ~ 17916528 (-)
G185294 NA non-coding upstream 290510 18057420 ~ 18058172 (-)
G185295 NA non-coding upstream 293479 18060389 ~ 18061348 (-)
G185320 znf513,LOC102795572 non-coding upstream 370815 18137725 ~ 18140207 (-)
LOC120546287 NA non-coding upstream 417050 18183960 ~ 18186587 (-)
tbpl1 tbpl1 other downstream 133454 17623124 ~ 17631351 (-)
LOC120547341 NA other downstream 495171 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 928822 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 1246931 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1576475 16146590 ~ 16188330 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 144360 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 722905 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 873511 18640421 ~ 18647401 (-)
abcd4 abcd4 other upstream 1011220 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 1137627 18904537 ~ 18907254 (-)

Expression


Co-expression Network