xkr6b (xkr6,LOC104922444,LOC102798941,LOC102196726,LOC102289544)


Basic Information

Item Value
gene id xkr6b
gene name xkr6,LOC104922444,LOC102798941,LOC102196726,LOC102289544
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17825639 ~ 17879853 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781502.1
GGTCTGCTCTTGGCACTCAGCTTGCAGCTGGAGGAGAGCTGCAGAGAGGGAAAACAACTGCGCAGCGGGAAATGAGATTAATGCACAGGTAACAATTGGTCGACCACAGATGGATGCATGAGTTACATATTAAATTGTTTGAACTTGTAGATTAGATTATTGTTACCAGGAGGGAATCGATCTGCAGTAGAGGGAAAACAAGACAAGATGTGCTGCGTCCATGGCGCCACTGGTGCGCTATCCGGGGACAGAGTGAGCGACGGCGACGCACTGACACCCCGCTTTTAGATGGCTCCAACATTTGGGGTGCAAAACAGGTGTCAGGGAAGTGTCGTCACGAACCCCGGAAGCCGGAGGAGGTGGGAACATCAGAGGGAAAGATGGCAGCGAAATCCGATGGTCGCGGGGTCGTCACCGGTTTCGCCCAGCTGCACAACCTGGATGAGGTGGTGGGGACGGGAGAGGACGACAATCGGAACAGCAGCTCATTCCACATCTGCCACTGCTGCAACACCTCGTCGTGCTACTGGGGCTGCCGGAGCGCCTGCCTGCATTACCTCCGGGGGAAGGGGAAGGGGAAAGATGCGGCGCGACCACCGCAGGAGGAGCGCCTCTGGCTGGACTGCCTGTGGATCATCCTGGCAATGCTGGTCTTTTTCTGGGACGTGGGGACCGATTTGTGGCTGGCCATCGACTATTACCACAAGCAGGACTTTCTGTGGTCAGGCCTGACCCTGTTCTTCGTGCTGGTGCCCTCTGTTCTGGTCCAGATCCTGAGCTTCAGGTGGTTTGTGCAGGATTACACTGGGGGCGGACTGGGCTCCGTGGAGGGGCTGAGTAGTCGTAGAGCAGCCAGTCTGCAAAGAGACAGGTGCTGCCGCCTCTCTGTCTGGGTCTGGCAGACCATCATACACATCTTTCAGTTGGGACAAGTGTGGAGGTACATCCGCACCATGTACCTCGGTATACAAAGTCACCGTCAGAAGGAGAACCAGCGGCGTTTTTACTGGGCTATGATGTATGAGTATGCCGATGTCAACATGCTGCGACTGCTAGAGACCTTCTTAGAAAGCGCCCCTCAGCTGGTGCTGCAGCTCTGCATCATGATCCAGAGCAACAAGGCTGAGTGGCTGCAGTGTGTTTCTGCCATGTCCTCCCTCCTGTCCCTGGCCTGGGTGCTAGCGTCTTACCACAAACTCCTGCGTGATTCACGTGACGACAAGAAGAGTATGAGTTATCGAGGTGCCCTGGTGCATCTGTTCTGGCGCCTTTTTACCATCTCCTCACGGGTGCTCTCCCTTGCTCTATTTGCCTCGGTTTTCCACATCTACTTTGGCATTTTTGTGGTGCTCCATTGGTGTGCCATGGCTTTCTGGGTCATCCATGGCGGCACCGACTTCTGCATGTCCAAGTGGGAGGAGGTATTGTTCAACATGGTGGTGGGCGTGGTCTACGTCTTCTGTTGGTTCAATGTACGTGCGGGCCGGGCGCGGTACAGAATGGTGGCCTATTACACAGTAGTACTGTTAGAGAATGCCATCCTCAGCCTCCTTTGGTATGCGTACCGTGACCCAGTCACCACTGACGCCTATGCTTCTTTTGCCCTCTGTGGCGTCTTCCTGTGCTTTGCCTCAGGTGTGGCCTGTATGGTTCTCTATTACGGGGTTCTACACCCCATGGGTCCCCGGCTGAGGGTGCTGGCCAGCTCCTGCTGTGCTGAGCTTCTGTGGGGCCTTCCATTACCCCCCGAGGCCGAGCCCATGGCTCCTACACCAGGGCCCCGTGGCTCTCAGGCCACCCCCACACGGGGTCTGGCAGGGGAACACGAAGAGTCAGATGAAACAGCCACAGACACCTGCCTTCCGGTTTTCCAGGTGAGGTCCACAGAGCCTGTGGATGCAGCTGGCAGGCCAATCCGGCCTGAGGGTCCTTTCATCAAGATAGACATGCCCAGAAAACGCTACCCAGCCTGGGATGCACACTTTGTGGATCGGCGCCTGCGTAGGACCATAAATGTGCTGCAGTACATTAGCCCGAACGCGGTGGGCATCAGGTATAGGGACGGTCCGCTTCTTTATGAACTCCTGCAGTACGAATCCTCCCTCTGAAGGCATCTTCTCCCTCAACTCTGTCACCTCCTATCACACAGTATGATGCACATGCCTTTCCTTTCTTTCACActgctcttcctcctctccagaTATTATCTcagctctctccttctctccactCTGATCATTCAATTTCCCTGCAGGAGAtgtgtgttagtaaaaggaAAGTCCGTCATGACAGTCTAAACACGCAGTCATGATTTATTTTTGGAAAAAGCATAcagtaaagagagaaaaatTTTAACCTACAGTATCTGatgtgatatacagtatacagaagTACCATATAAATCCCTCTACATTGATAGAGGAGGGTTCTGTATGAGTGTGTAGATAATATATGAATGTTTCATTATGAAATGTGTTTAATGCATTATATTGTATTGGTGATTCAACCTGTGAATACTTGTGAAGGGCATATTGTATGTCTCTGTGACATGGGACCGGCGCAAAGCCTGATGGGAATGATGGAGGAGAGTCCCAGAGGGGGCAGGTCTTTGCACATCCCAACATTTACTGCCATTGTATATGTCAATTATTGAAATGTATGATAATGTTTACCAAGTCCTTAGCCCATGAATTACAAAGCACTGAAATGTCTATCATGATACTGTAAATTGCAGAAAGGACACAATCAAAGATGTGTCTTAGAGAAGCATTTCAAAAATGGATTTTCCCTCTGTGAGCTTACGTGGCTCAAGTGTATCCTGGCTGTACTATTTTTGTTCAAAATCCTTAATTGTAATCGCATCATGTATGGAAGAAAAAAGAAGCACACTGACCTTCAATCAGTTCCACCCACACATTTAATTTCTACAGTGCATACTGCCCTCCAGTGGAGGCAAGCTGTAAGAGCACACCTTACTTGGTCATTTTTGCCAGTAGtacctgatttaaaaaaaacaaaacataatgaAACAAATGTAGAATGTAGTTGACATGAGCACAACATTTTCTAAATTGGTGGGTAGAAaattatgataaaaaaacattccaAAGCCTTTTTCTAAAAGATTGTAAGTGGTAAAGAGGGTAAAATGTGTGTTAACACATTTTAGTTTGAAGTGCAAAGACAGGCTTCAAGGAATCCTCCACCATTCCCTTCTGTATCCTAGAAAGTACTCCCTAATACAACctccttgttttgttttcctatcaACAAATGTTTTAGGTTGATTAATATATGCTTACTGGGTGCAAAGCCTTGTAATAAGTtcttgaaaaaaagacaattctGAGAAGATATTTCTATGCTATTATACTTCAGTGCATATTTGTGTCCACATTTATAGTCATTGACATAACTATATTTTGCCAGACCACACACTTTTTTACATAACTAAAAATGTGTGGAGTGCAGTGTTAAAAGTTATTCTCCTCAACATCAGTGTGCCCTCATAGAGGTTATACTCTTATATGGGTGTACAGGGCAACTGTTCTGGCACCAGCTAGCACAGTTGAAACAAAGCCAAATCACATCTAACAGTACTGTCTTTCCAAGATATCTGCCCCCTTGAACCAATAGAATGAGTCCTTGCAAAACGTGTGCCATCTATAGGCCAGATAAACATTTCCCAGATTTACATGCGGGAGCTCTCCACTACGGTTACCCACGGGACGACTACTGTATTCACTCATgacaaaaatcaaatcaaatttcaAAAACATGCCCTCTAAGTCACTTGACTTAAATTTCCAGAGAGGGCTACGGAACAATTCATGagaaaaatgaatacatttcatACTCCAATTTTATCTACTTACTCAATGATTCATCcaaatatataatgtgtgttttttacaTTGCAGTGTTTGCCATGACTTTAGTATGAGGCATTAGTACAAATGCGCCCAACAACGGGTGCCCAAGAGCCCTACACAAAACAGAGATTTCTTTCTCCTGGCTCACTGGCTTTCTGCTTAGCTGTTGCCACATGCGCCTGCTAACATCGTACTGTAAAAGGCAGATGCCATGTTAAGTCCAGGTCAAAGGTGAGAGGGGGTTTTTGCCAGGGGTGGAAAAGAACAGGAGGACAGATTGTGATAAAGGGCTTGACTGGAGCATATGTGTAGGATTCCTTGTACGCTTGTGTGAGAAGGAGTGTTTACTTCTTAGCACATACTGTTCAACCTACAGTATGTATTAGGGGATGCAATTGTGCTTGACTAGTGGTGGTGTGTTCGCATACTTGTCTTGTGTGTCTCCTCAGCCCTTTCCCACAGTTCTGTTCTCTCGCCGATTGTTCGGCTCCATCCTCGGTTGCTGCTCCGCCCTCTTCTCCATCTCTTCGGTGCTGGGCCTTGGTGCACTCCCGTGaaacactctcacactctctgGTAACTGAACAATGGGGTTTGAGGCTGAACAACTGGAGATCCTGACATGAGAACATGCAATGAGGTACACTGCCATAACCAAGAGCTTCAACATCCAGGGTCTTCCACCCTTCAGCTTAAAAGCGATGTTCAGCCCTGAGTAATTGAGAACTGTTGGGTCAGCTAGGGTGGAGCAAACATCCATCACACCATATGTATAGATATACATGAGTATGCAAACAACCAACTTGTTCATTGTTTACCATAGTAGCCAGAGTAGTTCCTCTCTGTTGTAGTGAATGAACAGCCATGTTAATAGTTAGTCAATTAATGAATAATAAGTATtgtcaaactaaaaaaaaaatactaagcAAAACAGCCAATATAGGGGTTCCTCAGGACCAACAAACAAGACCACTGAACCAGCTGACTCAGGGGTGTCTCAATGCAGTTCTCATCCCCAGGCATGTCCTCAAGGGTCTCCATTTTTTCCTTAACATATTGCATCCTAGACCACTCCTCGGCTGGGATTGTATCACTAAATTATGATTTGCACGTTTGTTTTCTTGGGAATGATTATTATACGTTTTTTGTGGTAGTTGGCTGCCTGGCATATGGTGCATCCTTTCTAAACACTGCTGACTTTTTCGAGACGTGGACACATGTCCAAATCAGGTGCAAATACACTGTGATTCAttcatttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtatgtgacaacgGTATTATATAGCATCATAAACAAGATTATGTACAACTGGGCTGCATTTCGTCTAGTGGTAAAACGCAGAGTATTTATGCTTGCTTAACTGTGTCATTAGAATAGTAGTAATGGCGGTTAGTTAACACTCATTGATTTAAATTTTACAGTGCAAAGAGTCTACAAGtctgatttttttatgaaacatgcagtatattttacatatttctACAGAACAGTTATAGTTTTACCACATTCTGTATCTAGTAAAAAGGATTAGATAAAAGCTGGTTAATAAGTGGGTtttgattttgtatttttccttAAAATTATACATGGGTTTCAAGAGCTAAGCTACACAAGAGTGCAAGTAAAAGCCGTTACTATACAGTGTAGTAGTAAGGCTGCCACACTTTATACCATAATCAAGGGCACAAAGAAATCCCCTGCAGAGAATTGTTTTTGTCAGGTTACCTGCCCAGTTTCACATCCCTCGACAGCCACAACACACAGCAAGAGCATCTGAACAGCAAGCTTGTTCTTCTCAGTCCTTGTTGTGCCTTGTCACTTTGGGTGCTTTAATCCAGCCATGGCAGCCAGGTCCGCAAACAACAATGCCAATGTCTTTCTTTACTTGTTTCATGTGCCACCACATTCACCAAGACGATGACAACACCAAACAATATTCTTCTTGTCGGTCTCCTCAAACCAGATCAAGCCAAGTTCTCAATACTGTCAGCTCACACCTTAGTCGACAACAACATTTAGTTTACCGTTTCATCCAAGTTGTCATCAATAGGACTGCACTGTTTCCTAGTTACAGTGTTACAACTAAACTTCACAGCGTGACAGAACCAAGTGGTGCGTACAGTGTGAAACCCAGTTATTGGCTCTATCAAAGACATAGGAGGAAAAAGTAAGGCAATACTGAACATCTTCTGTACTTGAACGTAGGGTTCCTCATCTTTATTCCATTTGAGCAAGCTGAAACACAACAGACCCAGTTGATTCAGCAAGTTACAAATTAGCAGTTTGGACTGAGCTCAAAAGCATTAGTTTTGGACTGTTTGATGGATAGTCTTAACAAATGCCAGCCACGATACCAAGCGATTTGGTCAATGATTGTTTTGTACTTTTGTCTATGCCTTTACATCTTATTCTGTCTTGCAATGATGAATGATTTGTAGTGCCAAGACGTAAACTTTGTGTCTTTTGTCTcgtgtgaagaaaaaaaaaattctctcgCCAAAATAATAACGCCTGCAGTTGGAATAAAACATGGAGGAAGTCAATGATGACAAAatgcgcaaaaaaaaaaaaatcacttatgTTGCATTTTCTTACAATGGAATGATGAAACAGGCCCGATCACTGATTCACTTTTAAATAACCTCATTTCCTGGTTTTCCAACCACCTCCCAGCATGCCTTTAAAAGTCATTGTGAGGTGACCCTCAACATTTAGCATGTAAGTGCTCTCAACTGCACAACAAACCCTCTGATTTCTGCATTAATGTGTAGCAGCAGGTCATTGTAGTGTTTAACTTGGTTTAAGTATGTACCTTAGTGTCATGACCATCTGTTTGACCACTGGAGTAGTATGTTCAGATGATAAAACGGTgcattttcttcttttacttttgatCCTTCTTTGATTTCTGTTAATAACCTGGTGCTGAATTTAAAAGGTGCTACCACTGTGGACTGCAGTCCACTTTTTAGCTTTCTGATAGCAGCCTTCCGGTTGACTGAGAGGGCCTGCGCCCCGCAAACTTGCAGTCTCAAAATGCTCTAGAGCTAGCACCTCAAATCCACACAGTTTACAGCAGAACTCAACTCTTAATGGTGCCATTTTGATTTTCCAAcctgcacaaaaaaacaacatttactctgtgtatatatactttAATATACTGGTTtcagcatacagtatgttttaattTTACTATGATTCAATCTGCACtaggatttttttctttcttttctctgagAGACTGAAACTGGCAGATGATAAAATGCATCTTTTTGGCAAACGCACAGGAGCACAAATGTACTATTGCTAATGGAATTtgggtaaaaaaaattatatagaaTGTGATTGCTGTGTTGTAAATTCCTGTCATCTATATGTCCTTAATCTGTGTGTAtctatttttgttgttattgtagAATTGGCTGTAatattttgtttgaaaatggATTTGATATTCCAATGAAGCGACTATGGTTGTCATATTAATTGCTGCTGATTTTTGAAATTGTTATCAAAGGTGTTGGGAAATATTGCTTTGTTTATATTCAATCAATTTCTAGATTGTGTTAGCTTGTTGGTGTATTTCACAAATCTATCAGGATACTCCCTAGACTATATGATTTATCCGGGGTATTCAAAAGTTGGCATAATGTCAGTAAGCAAATTCGCTACAATCTGTAGCATCTTTATGAAAGTGTACTCATACAGCTTATGTTGTAACTGAGAACATATAAGGAAAgatttctttgttgttgttgaatataaaaTGTAAGTAAATTGTTTCATGGAATCCCCgttctttaaaaaaagcaaaactgATGTCCTATTTTTGGGAACAATATGaatattattaataacataTGGTGCTACAGTTCTTTTTGTATGTTTTGGTTTTTAGATGAAAAGAGAAATATTATGCTGAAAATGTAATGTTAAGCCTTACTGTAGATTCATATATCAGACTGTTCATCCcagaagagaaaataaatatagtATTTGAAAGTGCAA

Function

symbol description
xkr6 Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to be integral component of membrane. Predicted to be active in plasma membrane.

NR:

description
PREDICTED: XK-related protein 6

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781502.1 True 8025 mRNA 0.43 3 17825639 17879853

Neighbor

gene id symbol gene type direction distance location
ccm2 ccm2 coding downstream 1122 17814475 ~ 17824517 (-)
sh3bgrl2 sh3bgrl2 coding downstream 35160 17783739 ~ 17790479 (-)
LOC120547258 NA coding downstream 45729 17767159 ~ 17779910 (-)
LOC120547353 NA coding downstream 62831 17762733 ~ 17762808 (-)
LOC120547359 NA coding downstream 63157 17762398 ~ 17762482 (-)
si:dkey-71h2.2 LOC102796288,LOC101475494,LOC104959816,LOC106959609,LOC103138648 coding upstream 182867 18062720 ~ 18101094 (-)
LOC120547347 NA coding upstream 188645 18068498 ~ 18068613 (-)
si:ch211-278j3.3 LOC100692210,LOC102294113,LOC101474259,LOC103355636 coding upstream 222409 18102262 ~ 18125572 (-)
snx17 snx17 coding upstream 261870 18141723 ~ 18172492 (-)
eif2b4 eif2b4 coding upstream 297560 18177413 ~ 18182615 (-)
G185200 NA non-coding downstream 134197 17687876 ~ 17691442 (-)
G185125 sgk1 non-coding downstream 229642 17593366 ~ 17595997 (-)
G185124 NA non-coding downstream 239147 17586251 ~ 17586492 (-)
G185123 sgk1 non-coding downstream 247351 17565669 ~ 17578288 (-)
G185094 NA non-coding downstream 298274 17525518 ~ 17527365 (-)
G185236 NA non-coding upstream 36288 17916141 ~ 17916528 (-)
G185294 NA non-coding upstream 177567 18057420 ~ 18058172 (-)
G185295 NA non-coding upstream 180536 18060389 ~ 18061348 (-)
G185320 znf513,LOC102795572 non-coding upstream 257872 18137725 ~ 18140207 (-)
LOC120546287 NA non-coding upstream 304107 18183960 ~ 18186587 (-)
zgc:153284 NA other downstream 58729 17764805 ~ 17766910 (-)
tbpl1 tbpl1 other downstream 194288 17623124 ~ 17631351 (-)
LOC120547341 NA other downstream 556005 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 989656 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 1307765 16490650 ~ 16517874 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 31417 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 609962 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 760568 18640421 ~ 18647401 (-)
abcd4 abcd4 other upstream 898277 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 1024684 18904537 ~ 18907254 (-)

Expression


Co-expression Network