G187878


Basic Information

Item Value
gene id G187878
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28163132 ~ 28166327 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254499
TTTTCCTTCTGCTACCGCTTCAATATCTGAATATAGGAACCGGTGTCCCTGgtgccaccaccaccaccctacTGCTACCGTCTTCAGAGAAAGATTAGCTTTTATATAAAACGTGTGGTTGTCTCTGTGGGAGTAAAAGGAAAGACGCAGCACAACCCGAGCCTCTTTTTATAAGCCCACTTAGGTCTTTGCTTCTCCCCCCCCGACCCCATAACCTGGACCCCTGACTGCTTCTTCCTTCCTCTGAGCGTTGGGTGTGACACAGGACGGCCAGCCACACCAGCTCTCTCTACCTGCCAGTAACTTGGCTTTCTCCCCACGACGTTTACACAAAGCTGTCCCTCTCCGCCTGCTCATCTCACCGTCAGTTCATCTGTAGCTTTACTGGCTTCTGGGATCCTGgatttatttctctttctcacATTTTAACCGATATTTCTGGGATATGACCGATAcaaagttgtttgtttttttgttttttgttttttcaactgACAGCAAATATTTGTGATAATTTCCCAAATATGaatccatattttttttttgccatcatTTTTCCTCACAAAAATGACACGTTTGCAGGATTTTATTTGTCGCTAACTGGAAAAAGAAACTCGTTGCCAATGATCACAGGGTTGACGTCAATAACATTGTCAGaccaaaaaaaggaaagaaaaatctTACCTCAAGGTCCACTTTTATACAGCGGTCATGGAGATGAAATTGAATACTCGAGAAAAAAGCCAGTAggtggaccttgagttaagttttatatattatatattattacatttgGACAGACAACTTGTGCAAATGTTAATATCCTTAAATTTGAACATTTGTACTGAATTTTTAGACCCTAAAAGTCTTCCCTAAAGAGGATACTGATTGATGATATTCCTCAGAAAACCTGTGTATTGGTCGAactctctttttctgttgtatcgcttcttcttcttcttcttcttcttgtctcCGTCCTCCAGCTCCAGCGTAGGGCAGCCCGTAGGATCTTCCCTCCTCTATGAGGAGACGCAGACACTCGACTTTGTTGTAATATTTCACCTTCACACGcgcaaacactcacacacaagaaGCCATACTGATTCAAAACAGCTTTACCATTCTGTCGTTGaaggtttattttaattttttctgtTCCCTTCGTTCTCCACGCACGGGGGAGCGTGTGACTGTGTTGATACAAACTGTGTTATTGCTGTTGTACATTTTCATCAAAGTACAAACTCATCAAAGTCGGTTAATCTAGTTGGATTTTATGGTGAAGATTTCTCCTGATGCCACACAGAACCCTAGCCAGATAAAAGTTTAGTCTTCGATCTAGTGCCTTCACTGTTGAGAACGAGGAGTCGGAGGGAAAAAGCAGCTCACGCAAACACAGGAGAGTAGCGTTTTAAATAGTTATAGCGCTTTAAGGAAAGCCCTCATGCCTCAGATGAGGATTATACCAAAATTAGACACTGATTGAATGCTTTTTAATTCGATATTCAGTGTCACTTTGGCTCAAAAGTAGCCTGAAAAAAAGTGGCTTAAAAAGTAAGAGTTGGGGAAAACTTTAGCTTTCTTTGCGATTAGTGGGATCAGACCACCAAAGGTCCATCTAAGGATCACATGAAGTGACTTTATGATACAGTGAATTATTCTTTTCATTCACCCGGGGGCCAACATCTGTCAGGAACCATCGTTAAATAGTTTGGGACCAGAAGCCCAGTCAGCCGTTATTTCCATGACAACACTGACATCTAGTGGTGAGATCTTCCTATAACTGGAGTCTGGAAAGGCAAGAACTGTCGATACATGTGGCTCTGACCAAATCTTCTTACTCCAAAGTGTAGAAAGAAGATTAAATCCCTTAAAGAACAAACATCACCAAACAACCAAACCTGGATCTTTagaaaaaatgtgtatttggaCCTCTGATACATGGAAACTGACTTAGGCATTAGCTTTGCCACTTATTCATTAGTTTGAGCCTTTTATCGTGTGCATTTGAACACAGGAAGATGTCGGATGATAACAGCGCTCCCAGTGCTCCTGTTCCCACAAATGAGCTTTAAACAGACTCGAGTGTCACTGGGAGATGTGGCAGATGGTTCAGTCAACAACAGCATCGCTGTGTGAGATAACTTTACTGATGTAGATTCATTCGTTTCCGCTGTCTGACAGAAGGCATGGAGGCAGGCTACACTGAGGGACAGTTTAAACCCCAACAGGAGGTTTTTCTCTGCAGgtttaaagtagggctgggcgatatggagaaaatcaaatatcaagaTGTttgtgaccaaatacctcgatatcgatattgcgacgaCATTGTAGGATTGACGATACAAAAAACACGCGGATCCACGCGACCAAGTGTGAAAATCCCttaatgcagcctgtaaaaccaggaaaagacaacactaatatcatattacgatatccaaaatcgaagacgatatctagtctcatatcacgatgtCCATATaacattgatatattgcccagtccCAGTTTAAAGGCAGCTGGCCCAGGAGAATGGCAGGAACACAGTCTGTAAAGGAAAAGTGCCACAACTTTAGGCAGTGTGCTGGATGCTGTCGAGGCTCACGGTTCTCACCAAATTGTTTAaccaaaataaatgtacagATGTATTCACACATTTAATTTCACGTTATGTCCCCATACATCTGTGTTTTCTGCTGCGAGACGATGATAACAGTCCAGTAGTTTACACTAAATATCGTCCTCTTGCAACAAGAAGAGCTCAAGAACCTTCAAATGAGTAGAAACTAGAGAGAAACCAACGCAGTCCTTCTGAGCAGGTTAGAAAACAAACTCCAAAAGTGTTTGTGCTGCAGATGGTTTTTAAATCCCAGATGACGTTCAACTTCTTTGTAATTATTTAAAATCAACACTGCGTAATTCCCAAATTTTCCTTACGCATCCATGTAATGACCAACGGAGACGTATCAGTCAGTTGGCCTTCCAGTTCAAATTCAAAATAGACTTCCTGAGCTGTGAGAACTCCCTCCACGTTCTTCACACCACTGTACAGACGACAGTGTCCTCGTGTTTGATCTGTGTTTATCGTTTAGTTTCGAGTTGGTTTTGAGGCATTTATTATTATCCATGTGATGTTGTATTGTAATGGTTGATTTTTGCTAATTGTGTTAATTTATTCTGTAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254499 True 3196 lncRNA 0.41 1 28163132 28166327

Neighbor

gene id symbol gene type direction distance location
man1a1 man1a1,LOC102782693 coding upstream 512 28001397 ~ 28162620 (+)
tbc1d32 tbc1d32 coding upstream 412479 27673178 ~ 27750653 (+)
selenol NA coding upstream 536145 27620131 ~ 27626987 (+)
ttc13 ttc13 coding upstream 545991 27592510 ~ 27617141 (+)
fam89a fam89a,LOC104954304 coding upstream 593862 27564976 ~ 27569270 (+)
fam184ab fam184a,LOC101465847,LOC102781517 coding downstream 37303 28203630 ~ 28379848 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding downstream 215355 28381682 ~ 28383084 (+)
ncoa1 ncoa1 coding downstream 226780 28393107 ~ 28466873 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding downstream 502935 28669262 ~ 28689591 (+)
vgll2a vgll2,LOC102778318 coding downstream 574841 28741168 ~ 28748192 (+)
G187884 NA non-coding upstream 34210 28128566 ~ 28128922 (+)
G187872 NA non-coding upstream 182109 27884718 ~ 27981023 (+)
G187861 NA non-coding upstream 374530 27788385 ~ 27788602 (+)
G187803 NA non-coding upstream 502475 27660365 ~ 27660657 (+)
G187785 NA non-coding upstream 520759 27563182 ~ 27642373 (+)
G187886 NA non-coding downstream 11074 28177401 ~ 28196686 (+)
G187906 NA non-coding downstream 198911 28365238 ~ 28377640 (+)
G187915 NA non-coding downstream 253665 28419992 ~ 28420262 (+)
G187918 NA non-coding downstream 305788 28472115 ~ 28545515 (+)
LOC120546306 NA non-coding downstream 334402 28500729 ~ 28504391 (+)
LOC120546215 LOC104930085 other upstream 1124904 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 1425329 26695430 ~ 26737803 (+)
G187574 NA other upstream 1477625 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1710767 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1731735 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 373073 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 706359 28872686 ~ 28883121 (+)
G188063 NA other downstream 720163 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 944631 29110958 ~ 29132700 (+)
G188167 ucn other downstream 967844 29134171 ~ 29136917 (+)

Expression


Co-expression Network